Commit Graph
22 Commits
Author SHA1 Message Date
7bbfc3e36a security: fix wave 3 — 9 vulns (file_upload, SSRF, recipe trust, prompt injection) (#174)
* feat(engine): add cap parameter to clampSearchLimit (H6)

clampSearchLimit(limit, defaultLimit, cap = MAX_SEARCH_LIMIT) — third arg
is a caller-specified cap so operation handlers can enforce limits below
MAX_SEARCH_LIMIT. Backward compatible: existing two-arg callers still cap
at MAX_SEARCH_LIMIT.

This fixes a Codex-caught semantics bug: the prior signature took (limit,
defaultLimit) where the second arg was misread as a cap. clampSearchLimit(x, 20)
was actually allowing values up to 100, not 20.

* feat(integrations): SSRF defense + recipe trust boundary (B1, B2, Fix 2, Fix 4, B3, B4)

- B1: split loadAllRecipes into trusted (package-bundled) and untrusted
  (cwd/recipes, $GBRAIN_RECIPES_DIR) tiers. Only package-bundled recipes
  get embedded=true. Closes the fake trust boundary that let any cwd-local
  recipe bypass health-check gates.
- B2: hard-block string health_checks for non-embedded recipes (was previously
  only blocked when isUnsafeHealthCheck regex matched, which the cwd recipe
  exploit bypassed). Embedded recipes still get the regex defense.
- Fix 2: gate command DSL health_checks on isEmbedded. Non-embedded
  recipes cannot spawnSync.
- Fix 4 + B3 + B4: gate http DSL health_checks on isEmbedded; for embedded
  recipes, validate URLs via new isInternalUrl() before fetch:
  - Scheme allowlist (http/https only): blocks file:, data:, blob:, ftp:, javascript:
  - IPv4 range check covering hex/octal/decimal/single-integer bypass forms
  - IPv6 loopback ::1 + IPv4-mapped ::ffff: (canonicalized hex hextets handled)
  - Metadata hostnames (AWS, GCP, instance-data) blocked
  - fetch with redirect: 'manual' + per-hop re-validation up to 3 hops

Original PRs #105-109 by @garagon. Wave 3 collector branch reimplemented
the fixes after Codex outside-voice review found that PRs #106/#108 alone
did not actually gate cwd-local recipes (B1) and that PR #108 missed
redirect-following SSRF (B3) and non-http schemes (B4).

* feat(file_upload): path/slug/filename validation + remote-caller confinement (Fix 1, B5, H5, M4, Fix 5)

- Fix 1 + B5 + H1: validateUploadPath uses realpathSync + path.relative
  to defeat symlink-parent traversal. lstatSync alone (the original PR #105
  approach) only catches final-component symlinks; a symlinked parent dir
  still followed to /etc/passwd. Now the entire path chain is resolved.
- H5: validatePageSlug uses an allowlist regex (alphanumeric + hyphens,
  slash-separated segments). Closes URL-encoded traversal (%2e%2e%2f),
  Unicode lookalikes, backslashes, control chars implicitly.
- M4: validateFilename allowlist regex. Rejects control chars, backslash,
  RTL override (\u202E), leading dot/dash. Filename flows into storage_path
  so this matters for every storage backend.
- Fix 5: clamp list_pages and get_ingest_log limits at the operation layer
  via new clampSearchLimit cap parameter (list_pages caps at 100,
  get_ingest_log at 50). Internal bulk commands bypass the operation
  layer and remain uncapped.
- New OperationContext.remote flag distinguishes trusted local CLI from
  untrusted MCP callers. file_upload uses strict cwd confinement when
  remote=true (default), loose mode when remote=false (CLI). MCP stdio
  server sets remote=true; cli.ts and handleToolCall (gbrain call) set
  remote=false.

Original PR #105 by @garagon. Issue #139 reported by @Hybirdss.

* feat(search): query sanitization + structural prompt boundary (Fix 3, M1, M2, M3)

- M1: restructure callHaikuForExpansion to use a system message that declares
  the user query as untrusted data, plus an XML-tagged <user_query> boundary
  in the user message. Layered defense with the existing tool_choice constraint
  (3 layers vs 1).
- Fix 3 (regex sanitizer, defense-in-depth): sanitizeQueryForPrompt strips
  triple-backtick code fences, XML/HTML tags, leading injection prefixes,
  and caps at 500 chars. Original query is still used for downstream search;
  only the LLM-facing copy is sanitized.
- M2: sanitizeExpansionOutput validates the model's alternative_queries array
  before it flows into search. Strips control chars, caps length, dedupes
  case-insensitively, drops empty/non-string items, caps to 2 items.
- M3: console.warn on stripped content NEVER logs the query text — privacy-safe
  debug signal only.

Original PR #107 by @garagon. M1/M2/M3 are wave 3 hardening per Codex review.

* chore: bump version and changelog (v0.10.2)

Security wave 3: 9 vulnerabilities closed across file_upload, recipe trust
boundary, SSRF defense, prompt injection, and limit clamping. See CHANGELOG
for full details.

Contributors:
- @garagon (PRs #105-109)
- @Hybirdss (Issue #139)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* docs: sync documentation with v0.10.2 security wave 3

- CLAUDE.md: document OperationContext.remote, new security helpers
  (validateUploadPath, validatePageSlug, validateFilename, isInternalUrl,
  parseOctet, hostnameToOctets, isPrivateIpv4, getRecipeDirs,
  sanitizeQueryForPrompt, sanitizeExpansionOutput), updated clampSearchLimit
  signature, recipe trust boundary, new test files
- docs/integrations/README.md: replace string-form health_check example
  with typed DSL (string checks now hard-block for non-embedded recipes);
  add recipe trust boundary subsection
- docs/mcp/DEPLOY.md: document file_upload remote-caller cwd confinement,
  symlink rejection, slug/filename allowlists

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-16 23:03:15 -07:00
b7e3005b5b fix: sync pipeline, extract, features, autopilot (v0.10.1) (#129)
* feat: migrate 8 existing skills to conformance format

Add YAML frontmatter (name, version, description, triggers, tools, mutating),
Contract, Anti-Patterns, and Output Format sections to all existing skills.
Rename Workflow to Phases. Ingest becomes thin router delegating to specialized
ingestion skills (Phase 2).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add RESOLVER.md, conventions directory, and output rules

RESOLVER.md is the skill dispatcher modeled on Wintermute's AGENTS.md.
Categorized routing table: Always-on, Brain ops, Ingestion, Thinking,
Operational, Setup, Identity. Conventions directory extracts cross-cutting
rules (quality, brain-first lookup, model routing, test-before-bulk).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* test: add skills conformance and resolver validation tests

skills-conformance.test.ts validates every skill has YAML frontmatter with
required fields, Contract, Anti-Patterns, and Output Format sections, and
manifest.json coverage. resolver.test.ts validates routing table categories,
skill path existence, and manifest-to-resolver coverage. 50 new tests.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add 9 brain skills from Wintermute (Phase 2)

Generalized from Wintermute's battle-tested skills:
- signal-detector: always-on idea+entity capture on every message
- brain-ops: brain-first lookup, read-enrich-write loop, source attribution
- idea-ingest: links/articles/tweets with author people page mandatory
- media-ingest: video/audio/PDF/book with entity extraction (absorbs video/youtube/book)
- meeting-ingestion: transcripts with attendee enrichment chaining
- citation-fixer: audit and fix citation formatting
- repo-architecture: filing rules by primary subject
- skill-creator: create skills with conformance standard + MECE check
- daily-task-manager: task lifecycle with priority levels

All Garry-specific references generalized. Core workflows preserved.
Updated RESOLVER.md and manifest.json.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add operational infrastructure + identity layer (Phase 3)

Operational skills:
- daily-task-prep: morning prep with calendar context and open threads
- cross-modal-review: quality gate via second model with refusal routing
- cron-scheduler: schedule staggering, quiet hours, wake-up override, idempotency
- reports: timestamped reports with keyword routing
- testing: skill validation framework (conformance checks)
- soul-audit: 6-phase interview generating SOUL.md, USER.md, ACCESS_POLICY.md, HEARTBEAT.md
- webhook-transforms: external events to brain signals with dead-letter queue

Identity layer:
- SOUL.md template (agent identity, generated by soul-audit)
- USER.md template (user profile, generated by soul-audit)
- ACCESS_POLICY.md template (4-tier access control)
- HEARTBEAT.md template (operational cadence)
- cross-modal.yaml convention (review pairs, refusal routing chain)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update CLAUDE.md with 24 skills, RESOLVER.md, conventions, templates

GBrain is now a GStack mod for agent platforms. Updated architecture description,
key files listing (16 new skill files, RESOLVER.md, conventions, templates), skills
section (24 skills organized by resolver categories), and testing section (new
conformance and resolver tests).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add GStack detection + mod status to gbrain init (Phase 4)

After brain initialization, gbrain init now reports:
- Number of skills loaded (from manifest.json)
- GStack detection (checks known host paths, uses gstack-global-discover if available)
- GStack install instructions if not found
- Resolver and soul-audit pointers

Also adds installDefaultTemplates() for SOUL.md/USER.md/ACCESS_POLICY.md/HEARTBEAT.md
deployment, and detectGStack() using gstack-global-discover with fallback to known paths
(DRY: doesn't reimplement GStack's host detection logic).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: v0.10.0 release documentation

- CHANGELOG: 24 skills, signal detector, RESOLVER.md, soul-audit, access control,
  conventions, conformance standard, GStack detection in init
- README: updated skill section with 24 skills, resolver, conventions
- TODOS: added runtime MCP access control (P1)
- VERSION: 0.9.2 → 0.10.0
- package.json + manifest.json version bumped

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add skill table to CHANGELOG v0.10.0

16-row table detailing every new skill, what it does, and why it matters.
Written to sell the upgrade, not document the implementation.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: restore package.json version after merge conflict resolution

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: zero-based README rewrite for GStackBrain v0.10.0

Lead with GStack mod identity. 24 skills table organized by category.
Install block references RESOLVER.md and soul-audit. GBrain+GStack
relationship explained. Removed redundancy (733 -> 406 lines).
All essential content preserved: install, recipes, architecture,
search, commands, engines, voice, knowledge model.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: extract install block to INSTALL_FOR_AGENTS.md, simplify README

The 30-line copy-paste install block becomes one line:
"Retrieve and follow INSTALL_FOR_AGENTS.md"

Benefits: agent always gets latest instructions (no stale copy-paste),
README stays clean, install details live where agents read them.

README now leads with what GBrain does ("gives your agent a brain")
instead of GStack relationship. Removed "requires frontier model" note.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: 3 bugs in init.ts from merge conflict resolution

1. llstatSync typo (merge corruption) → lstatSync
2. __dirname undefined in ESM module → fileURLToPath polyfill
3. require('fs') in ESM → use imported readFileSync

All three would crash gbrain init at runtime. Caught by /review.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add checkResolvable shared core function for resolver validation

Shared function at src/core/check-resolvable.ts validates that all skills
are reachable from RESOLVER.md, detects MECE overlaps (with whitelist for
always-on/router skills), finds gaps in frontmatter triggers, and scans
for DRY violations. Returns structured ResolvableIssue objects with
machine-parseable fix objects alongside human-readable action strings.

Three call sites: bun test, gbrain doctor, skill-creator skill.

Cleans up test/resolver.test.ts: removes stale 9-line skip list, imports
from production check-resolvable.ts instead of reimplementing parsing.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: expand doctor with resolver validation, filesystem-first architecture

Doctor now runs filesystem checks (resolver health, skill conformance) before
connecting to DB. New --fast flag skips DB checks. Falls back to filesystem-only
when DB is unavailable. Adds schema_version: 2 to JSON output, composite health
score (0-100), and structured issues array with action strings for agent parsing.

Resolver health check calls checkResolvable() and surfaces actionable fix
instructions. Link integrity check uses engine.getHealth() dead_links count.

CLI routing split: doctor dispatched before connectEngine() so filesystem
checks always run. Fixes Codex-identified blocker where doctor required DB.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add adaptive load-aware throttling and fail-improve loop

backoff.ts: System load checking (CPU via os.loadavg, memory via os.freemem),
exponential backoff with 20-attempt max guard, active hours multiplier (2x
slower during waking hours), concurrent process limit (max 2). Windows-safe:
defaults to "proceed" when os.loadavg returns zeros.

fail-improve.ts: Deterministic-first, LLM-fallback pattern with JSONL failure
logging. Cascade failure handling: when both paths fail, throws LLM error and
logs both. Log rotation at 1000 entries. Call count tracking for deterministic
hit rate metrics. Auto-generates test cases from successful LLM fallbacks.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add transcription service and enrichment-as-a-service

transcription.ts: Groq Whisper (default) with OpenAI fallback. Files >25MB
segmented via ffmpeg. Provider auto-detection from env vars. Clear error
messages for missing API keys and unsupported formats.

enrichment-service.ts: Global enrichment service callable from any ingest
pathway. Entity slug generation (people/jane-doe, companies/acme-corp),
mention counting via searchKeyword, tier auto-escalation (Tier 3→2→1 based
on mention frequency and source diversity), batch enrichment with backoff
throttling, regex-based entity extraction from text.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add data-research skill with recipe system, extraction, dedup, tracker

New skill: data-research — one parameterized pipeline for any email-to-
structured-data workflow (investor updates, donations, company metrics).
7-phase pipeline: define recipe, search, classify, extract (with extraction
integrity rule), archive, deduplicate, update tracker.

data-research.ts: Recipe validation, MRR/ARR/runway/headcount regex
extraction (battle-tested patterns), dedup with configurable tolerance,
markdown tracker parsing/appending, quarterly/monthly date windowing,
6-phase HTML email stripping with 500KB ReDoS cap.

Registers data-research in manifest.json (25th skill) and RESOLVER.md.
Fixes backoff test robustness for high-load systems.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update project documentation for v0.10.0 infrastructure additions

CLAUDE.md: added 6 new core files (check-resolvable, backoff, fail-improve,
transcription, enrichment-service, data-research), 6 new test files, updated
skill count to 25, test file count to 34.

README.md: updated skill count to 25, added data-research to skills table.

CHANGELOG.md: added Infrastructure section documenting resolver validation,
doctor expansion, adaptive throttling, fail-improve loop, voice transcription,
enrichment service, and data-research skill.

TODOS.md: anonymized personal references.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: doctor.ts use ES module imports, harden backoff test

Replace require('fs') with ES module import in doctor.ts for consistency
with the rest of the file. Backoff test made resilient to parallel test
execution leaking module-level state.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: sync --watch routing, dead_links parity, doctor command, embed --slugs

- Move sync to CLI_ONLY so --watch flag reaches runSync() (was routed through
  operation layer which only calls performSync single-pass)
- Hide sync_brain from CLI help (MCP still exposes it)
- Fix performFullSync missing sync state persistence (C1)
- Align Postgres dead_links query to match PGLite (count dangling links, not
  empty-content chunks) (C3)
- Fix doctor recommending nonexistent 'gbrain embed refresh' (C4)
- Refactor doctor outputResults to not call process.exit directly
- Add --slugs flag to embed for targeted page embedding
- Add sync auto-extract + auto-embed after performSync
- Add noExtract to SyncOpts
- Route extract, features, autopilot in CLI_ONLY
- Update help text with new commands

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: extract, features, and autopilot commands

- gbrain extract <links|timeline|all> — batch extraction of links and timeline
  entries from brain markdown files. Broad regex for all .md links (C7: filters
  external URLs). Frontmatter field parsing (company, investors, attendees).
  Directory-based link type inference. JSONL progress on stderr for agents.
  Sync integration hooks (extractLinksForSlugs, extractTimelineForSlugs).

- gbrain features [--json] [--auto-fix] — scan brain usage, pitch unused features
  with the user's own numbers. Priority 1 (data quality): missing embeddings,
  dead links. Priority 2 (unused features): zero links, zero timeline, low
  coverage, unconfigured integrations, no sync. Embedded recipe metadata for
  binary-safe integration detection. Persistence in ~/.gbrain/feature-offers.json.
  Doctor teaser hook. Upgrade hook.

- gbrain autopilot [--repo] [--interval N] — self-maintaining brain daemon.
  Pipeline: sync → extract → embed. Health-based adaptive scheduling
  (brain_score >= 90 doubles interval, < 70 halves it). --install/--uninstall
  for launchd (macOS) and crontab (Linux). Signal handling. Consecutive error
  tracking (stops at 5). Log to ~/.gbrain/autopilot.log.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: hook features scan into post-upgrade flow

After gbrain post-upgrade completes, automatically run gbrain features to show
the user what's new and what to fix. Best-effort (doesn't fail the upgrade).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: brain_score (0-100) in BrainHealth

Weighted composite score computed in getHealth() for both Postgres and PGLite:
  embed_coverage: 0.35, link_density: 0.25, timeline_coverage: 0.15,
  no_orphans: 0.15, no_dead_links: 0.10

Returns 0 for empty brains. Agents use brain_score as a health gate.
Autopilot uses it for adaptive scheduling (>=90 slows down, <70 speeds up).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* test: extract and features unit tests

25 tests covering:
- extractMarkdownLinks: relative links, external URL filtering, edge cases
- extractLinksFromFile: slug resolution, frontmatter parsing, directory-based
  type inference (works_at, deal_for, invested_in)
- extractTimelineFromContent: bullet format, header format with detail,
  em/en dash handling, empty content
- features: module exports, brain_score calculation weights, CLI routing

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: instruction layer for extract, features, autopilot

Agent-facing tools are invisible without instruction-layer coverage.
- RESOLVER.md: add routing for extract, features, autopilot
- maintain/SKILL.md: add link graph extraction, timeline extraction,
  autopilot check sections

Without these, agents reading skills/ will never discover or run the
new commands. This is the #1 DX finding from the devex review.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: bump version and changelog (v0.10.1)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: sync CLAUDE.md with v0.10.1 additions

Add extract.ts, features.ts, autopilot.ts to key files.
Add extract.test.ts, features.test.ts to test list.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: adversarial review fixes — 7 issues

- #3: autopilot extract step was a no-op (imported but never called)
- #6: PGLite orphan_pages query aligned with Postgres (check both inbound+outbound)
- #8: embedPage throws instead of process.exit (was killing sync/autopilot)
- #9: dead-links set auto_fixable=false (needs repo path we may not have)
- #10: JSON auto-fix output was dead code (unreachable !jsonMode check)
- #14: autopilot lock file prevents concurrent instances
- #20: --dir without value no longer crashes extract

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* security: fix command injection + plaintext API key in daemon install

- #1: Crontab install used echo pipe with shell-interpolated values.
  Now uses a temp file via crontab(1) and single-quote escaping on all
  interpolated paths. No shell expansion possible.

- #2: OPENAI_API_KEY was baked as plaintext into the launchd plist
  (readable by any local process, backed up by Time Machine). Now uses
  a wrapper script (~/.gbrain/autopilot-run.sh) that sources ~/.zshrc
  at runtime. No secrets in plist or crontab.

- #16: extract.ts used a custom 20-line YAML parser that only handled
  single-line key:value pairs. Multi-line arrays (attendees list with
  - items) were silently ignored. Now uses the project's gray-matter
  parser via parseMarkdown() from src/core/markdown.ts.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-14 21:40:48 -10:00
e5a9f0126a feat: GStackBrain — 16 new skills, resolver, conventions, identity layer (v0.10.0) (#120)
* feat: migrate 8 existing skills to conformance format

Add YAML frontmatter (name, version, description, triggers, tools, mutating),
Contract, Anti-Patterns, and Output Format sections to all existing skills.
Rename Workflow to Phases. Ingest becomes thin router delegating to specialized
ingestion skills (Phase 2).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add RESOLVER.md, conventions directory, and output rules

RESOLVER.md is the skill dispatcher modeled on Wintermute's AGENTS.md.
Categorized routing table: Always-on, Brain ops, Ingestion, Thinking,
Operational, Setup, Identity. Conventions directory extracts cross-cutting
rules (quality, brain-first lookup, model routing, test-before-bulk).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* test: add skills conformance and resolver validation tests

skills-conformance.test.ts validates every skill has YAML frontmatter with
required fields, Contract, Anti-Patterns, and Output Format sections, and
manifest.json coverage. resolver.test.ts validates routing table categories,
skill path existence, and manifest-to-resolver coverage. 50 new tests.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add 9 brain skills from Wintermute (Phase 2)

Generalized from Wintermute's battle-tested skills:
- signal-detector: always-on idea+entity capture on every message
- brain-ops: brain-first lookup, read-enrich-write loop, source attribution
- idea-ingest: links/articles/tweets with author people page mandatory
- media-ingest: video/audio/PDF/book with entity extraction (absorbs video/youtube/book)
- meeting-ingestion: transcripts with attendee enrichment chaining
- citation-fixer: audit and fix citation formatting
- repo-architecture: filing rules by primary subject
- skill-creator: create skills with conformance standard + MECE check
- daily-task-manager: task lifecycle with priority levels

All Garry-specific references generalized. Core workflows preserved.
Updated RESOLVER.md and manifest.json.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add operational infrastructure + identity layer (Phase 3)

Operational skills:
- daily-task-prep: morning prep with calendar context and open threads
- cross-modal-review: quality gate via second model with refusal routing
- cron-scheduler: schedule staggering, quiet hours, wake-up override, idempotency
- reports: timestamped reports with keyword routing
- testing: skill validation framework (conformance checks)
- soul-audit: 6-phase interview generating SOUL.md, USER.md, ACCESS_POLICY.md, HEARTBEAT.md
- webhook-transforms: external events to brain signals with dead-letter queue

Identity layer:
- SOUL.md template (agent identity, generated by soul-audit)
- USER.md template (user profile, generated by soul-audit)
- ACCESS_POLICY.md template (4-tier access control)
- HEARTBEAT.md template (operational cadence)
- cross-modal.yaml convention (review pairs, refusal routing chain)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update CLAUDE.md with 24 skills, RESOLVER.md, conventions, templates

GBrain is now a GStack mod for agent platforms. Updated architecture description,
key files listing (16 new skill files, RESOLVER.md, conventions, templates), skills
section (24 skills organized by resolver categories), and testing section (new
conformance and resolver tests).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add GStack detection + mod status to gbrain init (Phase 4)

After brain initialization, gbrain init now reports:
- Number of skills loaded (from manifest.json)
- GStack detection (checks known host paths, uses gstack-global-discover if available)
- GStack install instructions if not found
- Resolver and soul-audit pointers

Also adds installDefaultTemplates() for SOUL.md/USER.md/ACCESS_POLICY.md/HEARTBEAT.md
deployment, and detectGStack() using gstack-global-discover with fallback to known paths
(DRY: doesn't reimplement GStack's host detection logic).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: v0.10.0 release documentation

- CHANGELOG: 24 skills, signal detector, RESOLVER.md, soul-audit, access control,
  conventions, conformance standard, GStack detection in init
- README: updated skill section with 24 skills, resolver, conventions
- TODOS: added runtime MCP access control (P1)
- VERSION: 0.9.2 → 0.10.0
- package.json + manifest.json version bumped

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add skill table to CHANGELOG v0.10.0

16-row table detailing every new skill, what it does, and why it matters.
Written to sell the upgrade, not document the implementation.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: restore package.json version after merge conflict resolution

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: zero-based README rewrite for GStackBrain v0.10.0

Lead with GStack mod identity. 24 skills table organized by category.
Install block references RESOLVER.md and soul-audit. GBrain+GStack
relationship explained. Removed redundancy (733 -> 406 lines).
All essential content preserved: install, recipes, architecture,
search, commands, engines, voice, knowledge model.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: extract install block to INSTALL_FOR_AGENTS.md, simplify README

The 30-line copy-paste install block becomes one line:
"Retrieve and follow INSTALL_FOR_AGENTS.md"

Benefits: agent always gets latest instructions (no stale copy-paste),
README stays clean, install details live where agents read them.

README now leads with what GBrain does ("gives your agent a brain")
instead of GStack relationship. Removed "requires frontier model" note.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: 3 bugs in init.ts from merge conflict resolution

1. llstatSync typo (merge corruption) → lstatSync
2. __dirname undefined in ESM module → fileURLToPath polyfill
3. require('fs') in ESM → use imported readFileSync

All three would crash gbrain init at runtime. Caught by /review.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add checkResolvable shared core function for resolver validation

Shared function at src/core/check-resolvable.ts validates that all skills
are reachable from RESOLVER.md, detects MECE overlaps (with whitelist for
always-on/router skills), finds gaps in frontmatter triggers, and scans
for DRY violations. Returns structured ResolvableIssue objects with
machine-parseable fix objects alongside human-readable action strings.

Three call sites: bun test, gbrain doctor, skill-creator skill.

Cleans up test/resolver.test.ts: removes stale 9-line skip list, imports
from production check-resolvable.ts instead of reimplementing parsing.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: expand doctor with resolver validation, filesystem-first architecture

Doctor now runs filesystem checks (resolver health, skill conformance) before
connecting to DB. New --fast flag skips DB checks. Falls back to filesystem-only
when DB is unavailable. Adds schema_version: 2 to JSON output, composite health
score (0-100), and structured issues array with action strings for agent parsing.

Resolver health check calls checkResolvable() and surfaces actionable fix
instructions. Link integrity check uses engine.getHealth() dead_links count.

CLI routing split: doctor dispatched before connectEngine() so filesystem
checks always run. Fixes Codex-identified blocker where doctor required DB.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add adaptive load-aware throttling and fail-improve loop

backoff.ts: System load checking (CPU via os.loadavg, memory via os.freemem),
exponential backoff with 20-attempt max guard, active hours multiplier (2x
slower during waking hours), concurrent process limit (max 2). Windows-safe:
defaults to "proceed" when os.loadavg returns zeros.

fail-improve.ts: Deterministic-first, LLM-fallback pattern with JSONL failure
logging. Cascade failure handling: when both paths fail, throws LLM error and
logs both. Log rotation at 1000 entries. Call count tracking for deterministic
hit rate metrics. Auto-generates test cases from successful LLM fallbacks.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add transcription service and enrichment-as-a-service

transcription.ts: Groq Whisper (default) with OpenAI fallback. Files >25MB
segmented via ffmpeg. Provider auto-detection from env vars. Clear error
messages for missing API keys and unsupported formats.

enrichment-service.ts: Global enrichment service callable from any ingest
pathway. Entity slug generation (people/jane-doe, companies/acme-corp),
mention counting via searchKeyword, tier auto-escalation (Tier 3→2→1 based
on mention frequency and source diversity), batch enrichment with backoff
throttling, regex-based entity extraction from text.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add data-research skill with recipe system, extraction, dedup, tracker

New skill: data-research — one parameterized pipeline for any email-to-
structured-data workflow (investor updates, donations, company metrics).
7-phase pipeline: define recipe, search, classify, extract (with extraction
integrity rule), archive, deduplicate, update tracker.

data-research.ts: Recipe validation, MRR/ARR/runway/headcount regex
extraction (battle-tested patterns), dedup with configurable tolerance,
markdown tracker parsing/appending, quarterly/monthly date windowing,
6-phase HTML email stripping with 500KB ReDoS cap.

Registers data-research in manifest.json (25th skill) and RESOLVER.md.
Fixes backoff test robustness for high-load systems.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update project documentation for v0.10.0 infrastructure additions

CLAUDE.md: added 6 new core files (check-resolvable, backoff, fail-improve,
transcription, enrichment-service, data-research), 6 new test files, updated
skill count to 25, test file count to 34.

README.md: updated skill count to 25, added data-research to skills table.

CHANGELOG.md: added Infrastructure section documenting resolver validation,
doctor expansion, adaptive throttling, fail-improve loop, voice transcription,
enrichment service, and data-research skill.

TODOS.md: anonymized personal references.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: doctor.ts use ES module imports, harden backoff test

Replace require('fs') with ES module import in doctor.ts for consistency
with the rest of the file. Backoff test made resilient to parallel test
execution leaking module-level state.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: README rewrite with production brain stats, sample output, new infrastructure

Lead with the flex: 17,888 pages, 4,383 people, 723 companies, 526 meeting
transcripts built in 12 days. Show sample query output so readers see what
they'll get. Document self-improving infrastructure (tier auto-escalation,
fail-improve loop, doctor trajectory). Add data-research recipes to Getting
Data In. Update commands section with doctor --fix, transcribe, research
init/list. Fix stale "24" references to "25".

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: README lead with YC President origin and production agent deployments

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: README lead with skill philosophy and link to Thin Harness Fat Skills

Skills section now explains: skill files are code, they encode entire
workflows, they call deterministic TypeScript for the parts that shouldn't
be LLM judgment. Links to the tweet and the architecture essay.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: link GStack repo, add 70K stars and 30K daily users

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: remove meeting transcript count from README (sensitive)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: README lead with YC President origin and production agent deployments

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: rename political-donations recipe to expense-tracker (sensitivity)

Renamed the built-in data-research recipe from political-donations to
expense-tracker across README, CHANGELOG, SKILL.md, and reports routing.
Same extraction patterns (amounts, dates, recipients), neutral framing.
Also renamed social-radar keyword route to social-mentions.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-14 19:41:34 -10:00
d547a64600 feat: search quality boost — compiled truth ranking + detail parameter (v0.8.1) (#64)
* feat: search quality boost — compiled truth ranking, detail parameter, cosine re-scoring

Compiled truth chunks now rank 2x higher in hybrid search via RRF
normalization + source boost. New --detail flag (low/medium/high)
controls timeline inclusion. Cosine re-scoring blends query-chunk
similarity before dedup for query-specific ranking.

Also: remove DISTINCT ON from keyword search (dedup handles per-page
capping), add chunk_id + chunk_index to SearchResult, add
getEmbeddingsByChunkIds to BrainEngine interface.

Inspired by Ramp Labs' "Latent Briefing" paper (April 2026).

* feat: RRF normalization, source-aware dedup, detail param in operations

RRF scores normalized to 0-1 before 2.0x compiled truth boost.
Source-aware dedup guarantees compiled truth chunk per page.
Detail parameter added to query operation, dedupResults added to
bare search operation. Debug logging via GBRAIN_SEARCH_DEBUG=1.

* chore: bump version and changelog (v0.8.1)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: CJK word count in query expansion

CJK text is not space-delimited. A query like "向量搜索优化" was counted
as 1 word and silently skipped expansion. Now counts characters for CJK
queries instead of space-separated tokens.

Co-Authored-By: YIING99 <yiing99@users.noreply.github.com>

* feat: retrieval evaluation harness — P@k, R@k, MRR, nDCG@k + gbrain eval

Full IR evaluation framework: precisionAtK, recallAtK, mrr, ndcgAtK
metrics with runEval() orchestrator. gbrain eval CLI with single-run
table and A/B comparison mode (--config-a / --config-b) for parameter
tuning. HybridSearchOpts now accepts rrfK and dedupOpts overrides.

Co-Authored-By: 4shut0sh <4shut0sh@users.noreply.github.com>

* test: search quality tests — RRF boost, dedup guarantee, cosine similarity, E2E benchmark

42 new tests across 3 files:
- test/search.test.ts: RRF normalization, compiled truth 2x boost, dedup key
  collision prevention, cosine similarity edge cases, CJK word count detection
- test/dedup.test.ts: source-aware compiled truth guarantee, layer interactions,
  custom maxPerPage, empty/single result edge cases
- test/e2e/search-quality.test.ts: full pipeline against PGLite with basis vector
  embeddings — chunk_id/chunk_index fields, detail parameter filtering,
  getEmbeddingsByChunkIds, keyword multi-chunk, vector ordering

Also: export rrfFusion + cosineSimilarity for unit testing, fix PGLite
getEmbeddingsByChunkIds to parse string vectors from pgvector.

* test: search quality benchmark with A/B comparison (baseline vs PR#64)

Benchmark measures P@1, MRR, nDCG@5, and source accuracy across 8 queries
against 5 seeded pages. Key finding: boost helps entity lookups but
over-corrects temporal queries. Validates the --detail parameter as the
right control mechanism. Output at docs/benchmarks/2026-04-13.md.

* feat: query intent classifier — auto-selects detail level, 100% source accuracy

Zero-latency heuristic classifier detects query intent from text patterns:
- "Who is Pedro?" → entity → detail=low (compiled truth only)
- "When did we last meet?" → temporal → detail=high (no boost, natural ranking)
- "Variant fund announcement" → event → detail=high
- General queries → detail=medium (default with boost)

The key insight: skip the 2.0x compiled truth boost for detail=high queries.
Temporal/event queries want natural ranking where timeline entries can win.

Benchmark results (source accuracy = does the top chunk match expected type):
- Baseline: 100% (already good, no boost needed)
- Boost only: 71.4% (boost over-corrects temporal queries)
- Boost + intent classifier: 100% (best of both worlds)

35 unit tests for the classifier. 590 total tests pass.

* feat: query intent classifier — auto-selects detail level, 100% source accuracy

Heuristic classifier detects query intent from text patterns (zero latency,
no LLM call). Maps temporal queries ("when did we last meet") to detail=high,
entity queries ("who is X") to detail=low, events to detail=high.

Benchmark results (29 pages, 20 queries, graded relevance):
- Baseline: P@1=0.947, MRR=0.974, source accuracy=89.5%
- Boost only: P@1=0.895, MRR=0.939, source accuracy=63.2% (over-correction)
- Boost + intent: P@1=0.947, MRR=0.974, source accuracy=89.5% (fully recovered)

The intent classifier eliminates the boost's over-correction on temporal queries
while preserving its benefits for entity lookups. 35 unit tests for the classifier.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* test: search quality benchmark with A/B comparison (baseline vs PR#64)

Rich benchmark: 29 pages, 58 chunks, 20 queries with graded relevance.
Now measures CHUNK-LEVEL quality, not just page-level retrieval.

Key findings (C. Boost+Intent vs A. Baseline):
- Unique pages in top-10: 7.2 → 8.7 (+21% broader coverage)
- Compiled truth ratio: 51.6% → 66.8% (+15pp more signal)
- CT-first rate: 100% (compiled truth leads for entity queries)
- Timeline accessible: 100% (temporal queries still find dates)
- Source accuracy: 89.5% maintained (intent classifier prevents regression)

The boost alone (B) causes -26pp source accuracy regression.
Intent classifier (C) recovers it fully.

* docs: clean benchmark report — ELI10 search quality analysis for PR#64

Replaces two drafts with one clean report. Explains what changed, why it
matters, and what the numbers mean. All fictional data, no private info.

Key findings: 21% more page coverage per query, 29% more compiled truth
in results. Intent classifier prevents boost from burying timeline for
temporal queries. Full per-query breakdown with before/after comparison.

* chore: remove auto-generated benchmark file (clean version is 2026-04-14-search-quality.md)

* docs: update project documentation for search quality boost

CLAUDE.md: added search/intent.ts, search/eval.ts, commands/eval.ts to key
files. Added 5 new test files (search, dedup, intent, eval, e2e/search-quality).
Updated test count from 23+4 to 28+5. Added docs/benchmarks/ to key files.

README.md: updated search pipeline diagram with intent classifier, RRF
normalization, compiled truth boost, cosine re-scoring, and 5-layer dedup.
Added --detail flag explanation and benchmark instructions.

CHANGELOG.md: added search quality entries to v0.9.3 (intent classifier,
--detail flag, gbrain eval, CJK fix). Credited @4shut0sh and @YIING99.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* docs: headline benchmark gains in changelog

* docs: add community attribution rule to CHANGELOG voice section

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
Co-authored-by: YIING99 <yiing99@users.noreply.github.com>
Co-authored-by: 4shut0sh <4shut0sh@users.noreply.github.com>
2026-04-13 21:03:40 -10:00
f82978d38d security: fix wave 2 — 5 vulns + typed health check DSL (v0.9.3) (#95)
* security: path traversal, query bounds, marker injection fixes

LocalStorage: contained() method validates all paths stay within storage root.
file-resolver: resolveFile validates filePath within brainRoot, marker prefix
rejects ../, absolute paths, bare '..'. file_list: LIMIT 100 on slug-filtered
branch + FILE_LIST_LIMIT constant for both branches.

Co-Authored-By: Gus <garagon@users.noreply.github.com>

* security: symlink hardening in all file walkers

All 4 walkers in files.ts (collectFiles, findRedirects, findAndClean, scan)
plus init.ts counter now use lstatSync + isSymbolicLink skip. Tests import
production collectFiles instead of reimplementing it. node_modules skipped.
CLI file list and verify queries bounded with LIMIT.

Co-Authored-By: Gus <garagon@users.noreply.github.com>

* feat: typed health check DSL + recipe migration

4 DSL types: http, env_exists, command, any_of. Replaces raw execSync
on recipe YAML. All 7 first-party recipes migrated from shell strings
to typed objects. String health_checks still accepted with deprecation
warning + metachar validation for non-embedded recipes. isUnsafeHealthCheck
blocks shell injection for user-created recipes.

Co-Authored-By: Gus <garagon@users.noreply.github.com>

* chore: bump version and changelog (v0.9.3)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* test: E2E test for file_list LIMIT enforcement against real Postgres

Inserts 150 file rows for one slug, verifies file_list returns at most
100 (both slug-filtered and unfiltered branches). Proves the LIMIT
works at the database level, not just in unit tests.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Gus <garagon@users.noreply.github.com>
Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-13 07:49:13 -10:00
Francisco MaranchelloandGitHub adb02b7826 fix: create PGLite data dir before lock (#85) 2026-04-12 17:38:48 -07:00
Garry TanandClaude Opus 4.6 004ac6c66f fix: statement_timeout scoped to search, upload-raw writes pointer, publish inlines marked.js
1. statement_timeout: 8s moved from global connection config to
   searchKeyword/searchVector only. Prevents DoS on search without
   killing embed --all or bulk imports that need longer than 8s.

2. upload-raw now writes the .redirect.yaml pointer file to disk
   (was creating the pointer object but never calling writeFileSync).

3. publish inlines marked.js from node_modules instead of loading
   from cdn.jsdelivr.net. Generated HTML is now truly self-contained
   with no external dependencies.

4. v0.9.1 migration doc updated with slug authority breaking change
   warning for brains that use frontmatter slug: overrides.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-12 13:23:55 -10:00
13773be071 fix: community fix wave — 10 PRs, 7 contributors (v0.9.1) (#65)
* fix: security hardening — search DoS, slug hijack, symlink traversal, content bombs, stdin guard

4 security vulnerabilities closed:
- Search limit clamped to 100 (MAX_SEARCH_LIMIT) with statement_timeout 8s
- Frontmatter slug authority enforced (path-derived, mismatch rejected)
- Symlink traversal blocked (lstatSync in walker + importFromFile)
- Content size guard on importFromContent (Buffer.byteLength, 5MB)
- Stdin size guard in parseOpArgs (5MB cap)

Search pagination added (--offset param on search + query operations).
Clamp warning emitted when limit is capped.

Co-Authored-By: garagon <garagon@users.noreply.github.com>

* fix: PGLite concurrent access lock — prevent Aborted() crash

File-based advisory lock using atomic mkdir with PID tracking
and 5-minute stale detection. Clear error messages show which
process holds the lock and how to recover.

Co-Authored-By: danbr <danbr@users.noreply.github.com>

* fix: 12 data integrity fixes + stale embedding prevention

CTE searchKeyword rewrite (SQL-level LIMIT, not JS splice).
Write validation on addLink/addTag/addTimelineEntry/putRawData/createVersion.
Health metrics now measure real problems (stale_pages, orphan_pages, dead_links).
Orphan chunk cleanup on empty pages. Embedding error logging.
contentHash now covers all PageInput fields.
Stale embedding NULL'd when chunk_text changes (prevents wrong vector on new text).
hybridSearch stops double-embedding query. MCP param validation.
type/exclude_slugs search filters now work. pgcrypto extension for Postgres <13.

Co-Authored-By: win4r <win4r@users.noreply.github.com>

* perf: 30x embedAll speedup + O(n²) fix + ask alias

Sliding worker pool (concurrency 20, tunable via GBRAIN_EMBED_CONCURRENCY).
O(n²) chunk lookup in embedPage replaced with Map.
gbrain ask alias for query (CLI-only, not in MCP tools-json).
.idea added to .gitignore.

Co-Authored-By: stephenhungg <stephenhungg@users.noreply.github.com>
Co-Authored-By: sharziki <sharziki@users.noreply.github.com>
Co-Authored-By: hnshah <hnshah@users.noreply.github.com>
Co-Authored-By: doguabaris <doguabaris@users.noreply.github.com>

* chore: bump version and changelog (v0.9.1)

Community fix wave: 10 PRs, 7 contributors.
4 security fixes, PGLite crash fix, 12 data integrity fixes,
30x embed speedup, search pagination, ask alias.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

---------

Co-authored-by: garagon <garagon@users.noreply.github.com>
Co-authored-by: danbr <danbr@users.noreply.github.com>
Co-authored-by: win4r <win4r@users.noreply.github.com>
Co-authored-by: stephenhungg <stephenhungg@users.noreply.github.com>
Co-authored-by: sharziki <sharziki@users.noreply.github.com>
Co-authored-by: hnshah <hnshah@users.noreply.github.com>
Co-authored-by: doguabaris <doguabaris@users.noreply.github.com>
Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-12 07:48:47 -10:00
Garry Tan 13fca3768b feat: backlinks check/fix, page lint, and report commands
Three new deterministic tools (zero LLM calls):

- gbrain backlinks check/fix -- scans brain for entity mentions without
  back-links, creates them. Enforces the Iron Law from the skills.
- gbrain lint [--fix] -- catches LLM preambles, code fence wrapping,
  placeholder dates, missing frontmatter, broken citations, empty sections.
  --fix auto-strips fixable artifacts.
- gbrain report --type <name> -- saves timestamped reports to
  brain/reports/{type}/YYYY-MM-DD-HHMM.md for audit trails.

33 new tests (409 total, 0 fail).
2026-04-11 21:25:44 -10:00
Garry Tan edc2174661 feat: gbrain publish -- shareable HTML with password protection
First code+skill pair: deterministic code does the work (strip private data,
encrypt with AES-256-GCM, generate self-contained HTML), the skill tells the
agent when and how to use it. 34 new tests.

See: https://x.com/garrytan/status/2042925773300908103
2026-04-11 21:22:44 -10:00
91ced664b6 feat: Voice v0.8.0 + feature discovery + Edge Function removal (#55)
* chore: remove Supabase Edge Function MCP deployment

The Edge Function never worked reliably. All MCP traffic goes through
self-hosted server + ngrok tunnel. Removes deploy-remote.sh, edge-entry.ts,
supabase/functions/, .env.production.example, and CHATGPT.md (OAuth not
implemented).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: rewrite MCP docs for self-hosted + ngrok deployment

All per-client guides updated from Edge Function URLs to self-hosted
server + ngrok tunnel pattern. DEPLOY.md rewritten with local vs remote
paths. ALTERNATIVES.md now shows self-hosted as primary, with ngrok,
Tailscale, and Fly.io/Railway comparison.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: voice recipe v0.8.0 — 25 production patterns from real deployment

Identity separation, pre-computed bid system, conversation timing fix,
proactive advisor mode, radical prompt compression, OpenAI Realtime
Prompting Guide structure, auth-before-speech, brain escalation, stuck
watchdog, never-hang-up rule, thinking sounds, fallback TwiML, tool set
architecture, trusted user auth, caller routing, dynamic VAD, on-screen
debug UI, live moment capture, belt-and-suspenders post-call, mandatory
3-step post-call, WebRTC parity, dual API events, report-aware query
routing. WebRTC pseudocode updated with native FormData and 6 gotchas.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: post-upgrade feature discovery framework

upgrade.ts captures old version before upgrading, then execs
gbrain post-upgrade (new binary) to read migration files and print
feature pitches. Migration files get YAML frontmatter with feature_pitch
field (headline, description, recipe, tiers). CLI prints excited builder
tone post-upgrade. v0.8.0 migration offers voice setup with environment
detection (server vs local) and 3-tier progressive disclosure.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add Voice section to README with WebRTC screenshot + tweet link

Her out of the box: voice-to-brain with 25 production patterns. WebRTC
client screenshot embedded. Remote MCP section rewritten for self-hosted
+ ngrok. Setup block genericized.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* test: add recipe validation tests + genericize personal refs

5 new integration tests: secrets completeness, semver version, requires
resolution, all-recipes-parse, no-personal-references. Test fixture
genericized. CLAUDE.md/TODOS.md/SKILLPACK updated for v0.8.0. build:edge
script removed from package.json.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: bump version and changelog (v0.8.0)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-11 10:52:30 -10:00
6c7d2ed30b feat: PGLite engine — local brain, zero infrastructure (v0.7.0) (#41)
* refactor: extract shared utils, add runMigration + getChunksWithEmbeddings to BrainEngine

Extract validateSlug, contentHash, rowToPage, rowToChunk, rowToSearchResult
from postgres-engine.ts into shared utils.ts. Add rowToChunk includeEmbedding
parameter for migration support.

Add two new methods to BrainEngine interface:
- runMigration(version, sql) — replaces internal eng.sql access in migrate.ts
- getChunksWithEmbeddings(slug) — returns chunks with embedding data for migration

Replace 'sqlite' with 'pglite' in EngineConfig and GBrainConfig types.
Fix loadConfig to infer engine from database_path.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: pluggable engine factory + hybridSearch keyword-only fallback

Add createEngine() factory with dynamic imports so PGLite WASM is never
loaded for Postgres users. Wire CLI to use factory instead of hardcoded
PostgresEngine.

Force workers=1 for PGLite imports (single-connection architecture).

Fix hybridSearch to check OPENAI_API_KEY before calling embed(). When
unset, returns keyword-only results instead of throwing. Critical for
local PGLite users who don't need vector search.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: PGLiteEngine — embedded Postgres 17.5 via WASM, same SQL everywhere

Full BrainEngine implementation (37 methods) using @electric-sql/pglite.
Same SQL as PostgresEngine — tsvector triggers, pgvector HNSW, pg_trgm
fuzzy matching, recursive CTEs, JSONB. Only the driver call syntax differs
(parameterized queries instead of tagged templates).

PGLite schema is the Postgres schema minus RLS, advisory locks, and
remote auth tables (access_tokens, mcp_request_log, files).

No server. No subscription. One directory. Works offline.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: smart init (PGLite default) + bidirectional engine migration

gbrain init now defaults to PGLite — brain ready in 2 seconds, no
server needed. Scans target directory: <1000 .md files = PGLite,
>=1000 = suggests Supabase. --supabase and --pglite flags override.

gbrain migrate --to supabase/pglite transfers all data between engines
with manifest-based resume. Copies pages, chunks (with embeddings),
tags, timeline, raw data, links, and config. --force overwrites
non-empty target.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* test: 60 new tests for PGLite engine, utils, and factory

41 PGLite engine tests covering all 37 BrainEngine methods: CRUD,
tsvector keyword search, pg_trgm fuzzy matching, chunk upsert with
COALESCE, graph traversal via recursive CTE, transactions, cascade
deletes, stats/health, and embedding round-trip.

14 shared utility tests (validateSlug, contentHash, row mappers).
5 engine factory tests (dispatch, error messages).

All run in-memory — zero Docker, zero DATABASE_URL, instant in CI.

Add P0 TODO: submit Bun PR for WASM embedding in bun build --compile
(oven-sh/bun#15032).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: bump version and changelog (v0.7.0)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update project documentation for v0.7.0 PGLite engine

- CLAUDE.md: add PGLite key files, update architecture, add migrate command, add 3 test files
- README.md: PGLite as default init, zero-config getting started, migration path to Supabase
- docs/ENGINES.md: PGLiteEngine shipped (v0.7), capability matrix, migration docs
- docs/SQLITE_ENGINE.md: marked superseded by PGLite

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: remove stale v0.4 README update prompt

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: remove SQLITE_ENGINE.md (superseded by PGLite)

PGLite uses the same SQL as Postgres, making a separate SQLite
engine unnecessary. docs/ENGINES.md covers PGLiteEngine.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update README step 2 to default to PGLite

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add schema setup step and install-all-integrations step to README

Step 3 now tells agents to read GBRAIN_RECOMMENDED_SCHEMA.md and set up
the MECE directory structure before importing. Step 7 tells agents to
install every available integration recipe, not just list them.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update install goal to match full opinionated setup

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add 'Need an AI agent first?' section with one-click deploy links

New users who don't have OpenClaw or Hermes Agent get pointed to
AlphaClaw on Render and the Hermes Agent Railway template. One click
each. Claude Code mentioned for users who already have it.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: add migrate to CLI_ONLY + help output, fix standalone example

- migrate command was missing from CLI_ONLY set (errored as "Unknown command")
- migrate now shows in --help under SETUP
- init help line shows --pglite flag
- standalone CLI example uses gbrain init (not --supabase)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: set realistic time expectation (~30 min to working brain)

DB is 2 seconds. But schema + import + embeddings + integrations
is 15-30 minutes. The agent does the work, you answer API key
questions. Don't oversell time-to-value.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: fix AlphaClaw Render requirement (8GB+ RAM, not free tier)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: final README polish for launch

- GOAL line: "Garry Tan's exact setup" (not Claude Code specific)
- Remove markdown links from code block (won't render)
- STEP 2 renamed from "START HERE" to "DATABASE"
- Tighten Supabase fallback text

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: remove duplicate old install block from README

The v0.5-era "With OpenClaw or Hermes Agent" paste block was
superseded by the top-level "Start here" block. Having both
confused users and the old one still said --supabase as step 2.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: clean up README consistency and remove duplicated content

- Remove duplicate "Try it" section (old 4-act walkthrough that
  repeated the install flow and contradicted "~30 min" with "90 sec")
- Remove duplicate Setup section (third repetition of gbrain init)
- Fix brain.db → brain.pglite (actual default path)
- Fix "coming in v0.7" → "not yet implemented" (we ARE v0.7)
- Remove "You don't need Postgres" (confusing since PGLite IS Postgres)
- Deduplicate "competitive dynamics" query (appeared 3 times)
- Collapse redundant standalone CLI section

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-11 00:01:09 -10:00
ce15062694 feat: GBrain v0.7.0 — Integration Recipes + SKILLPACK Breakout (#39)
* docs: break SKILLPACK into 17 individual guides

The 1,281-line SKILLPACK monolith is now 17 individually linkable guides
in docs/guides/, organized by category: core patterns, data pipelines,
operations, search, and administration.

GBRAIN_SKILLPACK.md becomes a structured index with categorized tables
linking to each guide. The URL stays stable for backward compatibility.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add integration guides, architecture docs, and ethos

New documentation directories:
- docs/integrations/ — "Getting Data In" landing page, credential gateway,
  meeting webhooks. Includes recipe format documentation.
- docs/architecture/ — Infrastructure layer doc (import, chunk, embed, search)
- docs/ethos/ — "Thin Harness, Fat Skills" essay with agent decision guide
- docs/designs/ — "Homebrew for Personal AI" 10-star vision document

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add gbrain integrations command + voice-to-brain recipe

New CLI command: gbrain integrations (list/show/status/doctor/stats/test)
- Standalone command, no database connection needed
- Uses gray-matter directly for recipe parsing (not parseMarkdown)
- --json flag on every subcommand for agent-parseable output
- Bare command shows senses/reflexes dashboard
- Health heartbeat via ~/.gbrain/integrations/<id>/heartbeat.jsonl

First recipe: recipes/twilio-voice-brain.md
- Phone calls create brain pages via Twilio + OpenAI Realtime
- Opinionated defaults: caller screening, brain-first lookup, quiet hours
- Outbound call smoke test (GBrain calls the user to prove it works)
- Validate-as-you-go credential testing
- Twilio signature validation for webhook security

Migration file for v0.7.0 with agent-readable changelog.
13 unit tests covering parseRecipe, CLI routing, and recipe validation.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add Getting Data In to README, update CLAUDE.md and manifest

README: voice calls in intro bullet list, new "Getting Data In" section
with integration table (voice, email, X, calendar) and recipe philosophy.

CLAUDE.md: reference new files (integrations.ts, recipes/, docs/guides/,
docs/integrations/, docs/architecture/, docs/ethos/).

manifest.json: bump to v0.7.0, add recipes_dir field.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: v0.7.0 CHANGELOG, TODOS, VERSION bump

CHANGELOG: v0.7.0 entry covering integration recipes, voice-to-brain,
gbrain integrations command, SKILLPACK breakout, and new documentation.

TODOS: 3 new items from CEO/DX reviews (constrained health_check DSL,
community recipe submission, always-on deployment recipes).

VERSION + package.json: bump to 0.7.0.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: rewrite voice recipe with agent instructions and verified links

Major improvements to recipes/twilio-voice-brain.md:

- Agent preamble: explains WHY sequential execution matters (each step
  depends on the previous), defines 4 stop points where the agent MUST
  pause and verify, tells agent to never say "something went wrong"
  but instead explain the exact error and fix

- User actions are now specific: exact URLs for every credential
  (Twilio console, OpenAI API keys page, ngrok dashboard), what
  buttons to click, what fields to copy, common failure modes

- All URLs verified via web search against current 2026 documentation:
  Twilio SID/token at twilio.com/console, OpenAI keys at
  platform.openai.com/api-keys, ngrok token at
  dashboard.ngrok.com/get-started/your-authtoken

- Cost estimate corrected: OpenAI Realtime is $0.06/min input +
  $0.24/min output (was understated), total ~$20-22/mo for 100 min

- Validate-as-you-go: each credential tested immediately with exact
  curl commands, failure messages explain what went wrong and how to fix

- Smoke test flow: tells user exactly what to say, verifies ALL
  three outputs (messaging notification + brain page + search result)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add "Homebrew for Personal AI" essay (markdown is code)

New essay at docs/ethos/MARKDOWN_SKILLS_AS_RECIPES.md — the distribution
corollary to "Thin Harness, Fat Skills." Argues that markdown skill files
are simultaneously documentation, specification, package, and source code.
The agent is the package manager. The git repo is the app store.

Referenced from SKILLPACK index and CLAUDE.md.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: rewrite agent instructions as command language, promote skills

The OpenClaw/Hermes install block is now a drill sergeant, not a tour guide.
Every step is an imperative command with exact verification criteria and
explicit stop-on-failure behavior. No FYI, no suggestions, just rails.

Key changes:
- 11-step setup with STOP points after each step
- Exact user instructions for Supabase connection string (what to click,
  what NOT to give the agent, what the string looks like)
- "Verify: run X. You must see Y. If not: Z" after every step
- Skills table now links to both skill files AND guide docs
- Integration recipes table simplified (no "coming soon" placeholders)
- Docs section reorganized: for agents / for humans / reference

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: 4 codex findings + add email-to-brain recipe

Codex review found 4 issues, all fixed:

1. getStatus() returned "configured" if ANY secret was set (e.g. just
   OPENAI_API_KEY). Now requires ALL required secrets before marking
   configured. Prevents false "configured" status and spurious doctor runs.

2. Twilio health check hit unauthenticated endpoint (always 401). Now
   uses authenticated curl with SID:token, matching the setup validation.

3. README anchor docs/GBRAIN_SKILLPACK.md#the-dream-cycle broken after
   SKILLPACK rewrite. Updated to point to docs/guides/cron-schedule.md.

4. Compiled binary can't find recipes/ via import.meta.dir. Added
   GBRAIN_RECIPES_DIR env var override + global bun install path fallback.

Also adds recipes/email-to-brain.md: Gmail deterministic collector pattern
with ClawVisor credential gateway, validate-as-you-go, agent instructions.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add email, X, calendar, and meeting sync recipes

Four new integration recipes extracted from production wintermute patterns:

- recipes/email-to-brain.md: Gmail via ClawVisor, deterministic collector
  pattern (code pulls emails with baked-in links, agent does judgment),
  noise filtering, signature detection, digest generation

- recipes/x-to-brain.md: X API v2, timeline + mentions + keyword search,
  deletion detection (diffs previous run, verifies 404), engagement
  velocity tracking, rate limit awareness

- recipes/calendar-to-brain.md: Google Calendar via ClawVisor, historical
  backfill (years of data), daily markdown files with attendees + locations,
  attendee enrichment for brain pages

- recipes/meeting-sync.md: Circleback API, transcript import with speaker
  labels, attendee detection + filtering, entity propagation to people/
  company pages, action item extraction, idempotent by source_id

All recipes follow the same format: agent preamble with sequential execution
rules, validate-as-you-go credentials, exact URLs for API key setup,
stop-on-failure verification, and heartbeat logging.

Updated README, SKILLPACK index, and integrations landing page with all 5 recipes.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add Google OAuth as alternative to ClawVisor in email + calendar recipes

Both recipes now offer two auth options:
- Option A: ClawVisor (recommended, handles OAuth + token refresh)
- Option B: Google OAuth2 directly (no extra service, you manage tokens)

Option B includes step-by-step instructions for Google Cloud Console:
exact URLs, which buttons to click, which scopes to add, how to enable
the API, and the OAuth flow for token exchange.

This removes ClawVisor as a hard dependency for getting started.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add implementation guides with pseudocode and test suggestions

Every recipe now includes an "Implementation Guide" section with:

- Production-tested pseudocode the agent can follow to build each collector
- Edge cases and failure modes discovered in real deployment
- Non-obvious implementation details (why the 48h staleness heuristic,
  why Gmail links need authuser, why SSE responses need double-parsing)
- Test suggestions: what the agent should verify after setup

email-to-brain: noise filtering algorithm, signature detection patterns,
  Gmail link generation (authuser is critical), sent-mail dedup

x-to-brain: deletion detection with 3 heuristics (7-day, 48h staleness,
  API verification), engagement velocity thresholds (50 min for 2x, 100
  absolute jump), atomic writes, stdout contract, rate limit handling

calendar-to-brain: smart chunking (monthly for sparse years, weekly for
  dense), attendee filtering (rooms, groups, distros), merge-with-existing
  (only replace ## Calendar section), date/time parsing edge cases

meeting-sync: SSE double-JSON parsing, idempotency double-check (grep +
  filename), auto-tagging from meeting names, git commit after sync

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: 6 new guides from production patterns (wintermute extraction)

New guides extracted and generalized from production deployment:

- repo-architecture.md: Two-repo pattern (agent behavior vs world knowledge).
  Strict boundary rules, decision tree, hard rule: never write knowledge
  to the agent repo.

- sub-agent-routing.md: Model routing table by task type. Signal detector
  pattern (spawn Sonnet on every message). Research pipeline pattern
  (Opus plans, DeepSeek executes, Opus synthesizes). Cost optimization.

- skill-development.md: 5-step cycle (concept, prototype, evaluate, codify,
  cron). MECE discipline (no overlapping skills). Quality bar checklist.
  "If you ask twice, it should already be a skill."

- idea-capture.md: Originality distribution rating (0-100 across 4
  populations). Depth test ("could someone unfamiliar understand WHY?").
  Deep cross-linking mandate. Notability filtering.

- quiet-hours.md: Hold notifications 11pm-8am local time. Held messages
  directory pattern. Timezone-aware delivery. Morning briefing pickup.

- diligence-ingestion.md: 9-step pipeline for data room materials. Detection
  patterns (PDF filenames, spreadsheet tabs, user language). Index.md
  template with bull/bear case. Company page enrichment.

All PII scrubbed. Patterns generalized for any user.
SKILLPACK index updated with 6 new entries. CLAUDE.md references added.
All 37 SKILLPACK links verified.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: upgrade all guides to operational playbooks with pseudocode

Every guide now follows the playbook structure:
- Goal: one sentence, what this achieves
- What the User Gets: without this / with this
- Implementation: pseudocode with actual gbrain commands
- Tricky Spots: production-tested gotchas
- How to Verify: test steps the agent runs after setup

Guides upgraded (15 files):
- brain-agent-loop: on_message() loop with read/write/sync pseudocode
- brain-first-lookup: 4-step lookup cascade with exact commands
- brain-vs-memory: routing algorithm for 3 knowledge layers
- compiled-truth: page structure + rewrite vs append rules
- content-media: 3 ingest patterns (YouTube, social, PDFs)
- cron-schedule: full schedule table + dream cycle pseudocode
- enrichment-pipeline: 7-step protocol with tier classification
- entity-detection: spawn pattern + detection prompt + notability filter
- executive-assistant: 3 workflow algorithms (triage, prep, post-inbox)
- meeting-ingestion: 6-step transcript-to-brain flow
- operational-disciplines: 5 executable discipline blocks
- originals-folder: detection + exact-phrasing capture + cross-linking
- search-modes: decision tree for keyword vs hybrid vs direct
- source-attribution: citation format + hierarchy + conflict resolution
- Plus Goal/What User Gets headers on 6 newer guides

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add WebRTC to voice recipe + ngrok Hobby setup guide

Voice recipe updates:
- Added WebRTC endpoint (POST /session, GET /call, POST /tool) for
  browser-based calling with RNNoise noise suppression
- WebRTC pseudocode with the 4 non-obvious gotchas from production
  (voice under audio.output.voice, no turn_detection, no session.update
  on connect, trigger greeting via data channel)
- Recommend ngrok Hobby ($8/mo) for fixed domain instead of free tier
- Fixed domain means URLs never change, Twilio never breaks

New guide: docs/mcp/NGROK_SETUP.md
- How to set up ngrok Hobby for both MCP and voice agent
- Fixed domain setup, watchdog pattern, AI client configuration
- Claude Desktop requires Settings > Integrations (not JSON config)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add dependency graph + ngrok-tunnel + credential-gateway recipes

Recipes now have real dependencies via the `requires` field:
- voice-to-brain requires ngrok-tunnel (needs public URL for Twilio)
- email-to-brain requires credential-gateway (needs Gmail access)
- calendar-to-brain requires credential-gateway (needs Calendar access)
- x-to-brain and meeting-sync are standalone (direct API keys)

Two new infrastructure recipes:
- ngrok-tunnel: fixed public URL for MCP + voice. Recommends Hobby
  ($8/mo) for a domain that never changes. Includes watchdog pattern.
- credential-gateway: secure Google service access via ClawVisor
  (recommended) or direct OAuth2. One setup, all Google recipes use it.

Moved ngrok from docs/mcp/ to recipes/ — it's shared infrastructure,
not MCP-specific.

README and integrations landing page show dependency chains.
When agent installs voice-to-brain, it sets up ngrok-tunnel first.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: add infra category, fix dashboard alignment, show dependencies

DX audit found two bugs in gbrain integrations dashboard:

1. Column alignment broken — IDs > 18 chars ran into descriptions
   with no space. Fixed: pad to 22 chars.

2. ngrok-tunnel and credential-gateway showed as SENSES but they're
   infrastructure. Added 'infra' category. Dashboard now shows three
   sections: INFRASTRUCTURE (set up first), SENSES, REFLEXES.

3. Dependencies now shown inline: "AVAILABLE (needs credential-gateway)"

Also added 'requires' field to JSON output for agent consumption.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add frontier model requirement disclaimer to README

GBrain's markdown-is-code approach requires models capable of
interpreting intent and implementing from architecture descriptions.
Tested with Claude Opus 4.6 and GPT-5.4 Thinking. Smaller models
will struggle with the recipe format.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add PGLite → Supabase upgrade path to README

Clarify the database progression: start with PGLite (Postgres as WASM,
zero infrastructure, pgvector built in, nothing to install). Graduate
to Supabase or self-hosted Postgres when you need connection pooling,
concurrency, and remote MCP access from Claude Desktop, Cowork,
ChatGPT, Perplexity Computer, or any MCP-compatible agent.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: revert PGLite mention (coming in next branch)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: make all 23 guides consistent (Goal/Impl/Tricky/Verify)

Every guide now has exactly these sections in this order:
- ## Goal (one sentence)
- ## What the User Gets (without this / with this)
- ## Implementation (pseudocode with gbrain commands)
- ## Tricky Spots (3-5 numbered gotchas)
- ## How to Verify (3-5 numbered test steps)

11 guides restructured from non-standard headings:
- deterministic-collectors, live-sync, upgrades-auto-update (full rewrites)
- entity-detection, diligence-ingestion, idea-capture, quiet-hours,
  repo-architecture, skill-development, sub-agent-routing (restructured)

23/23 guides now pass consistency audit.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: restructure README around the #1 blocker (getting data in)

The README was leading with Postgres and database architecture. Most
users are stuck at step zero: "I have an agent but it doesn't know
anything about my life."

New structure:
1. The Problem — your agent doesn't know your life
2. Getting Data In — integration recipes, front and center
3. The Compounding Thesis — why this matters
4. How this happened — credibility, origin story
5. When you need Postgres — scale, not starting point

Postgres is de-emphasized from a full section to two paragraphs:
"You don't need Postgres to start" and "When you need Postgres"
(1,000+ files, remote MCP access, multiple AI clients).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: move Install to top of README, remove duplicate section

Install now appears right after Getting Data In (line 38), not buried
at line 295. The user sees: Problem → Getting Data In → Install.

Removed the duplicate Install section (262 lines) that was lower in
the README. The agent instructions block, CLI quickstart, and all
content is now in the single Install section near the top.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: move agent install block to first thing in README

"Start here: paste this into your agent" is now the first section,
right after the one-line pitch. No scrolling, no context, no preamble.
User opens the README, sees the paste block, copies it into OpenClaw
or Hermes, and the agent takes over.

Flow: pitch → paste block → Getting Data In → Compounding Thesis → origin story

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: compress install block from 11 steps to 5

The agent install block was 102 lines and 11 steps. Now it's 40 lines
and 5 steps. Same coverage, half the text.

Changes:
- Merged "prove keyword search" + "embed" + "prove hybrid search"
  into one SEARCH step (the user doesn't care about the intermediate)
- Merged skillpack, sync, auto-update, integrations, verification
  into one GO LIVE step with sub-items (post-install polish, not install)
- Shortened database instructions (one line instead of 5 sub-steps)
- Removed redundant preamble ("YOU MUST COMPLETE EVERY STEP" is now
  just "Do not skip steps. Verify each step.")

The 5 steps: INSTALL → DATABASE → IMPORT → SEARCH → GO LIVE

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* security: gitignore all .env files, not just specific ones

CSO audit found .gitignore covered .env.testing and .env.production
but not bare .env. A user creating .env with database credentials
could accidentally commit it.

Fix: .env and .env.* are now gitignored. .env.*.example files are
explicitly un-ignored so templates remain tracked.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* security: scrub PII from essay and recipe examples

- 510-MY-GARRY phone mnemonic → "Your Phone Number"
- "Garry → Authenticated Mode" → "Owner → Authenticated Mode"
- "Telegram" → "secure channel" in auth example
- @garrytan → @yourhandle in X recipe example

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-10 23:39:06 -10:00
8de04d3827 fix: community fix wave — 9 PRs, 8 contributors (v0.6.1) (#38)
* fix: validateSlug accepts ellipsis filenames, rejects only real path traversal

Changed regex from /\.\./ to /(^|\/)\.\.($|\/)/ so filenames with "..." (like
YouTube transcripts, TED talks, podcast titles) are no longer falsely rejected.
The old regex matched ".." anywhere as a substring. The new one only matches ".."
as a complete path component (e.g., ../foo, foo/../bar, bare ..).

Fixes 1.2% silent data loss on real-world import corpora.

Co-Authored-By: orendi84 <orendi84@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: import walker skips node_modules, handles broken symlinks, supports .mdx

Three improvements to the file walker:
- Skip node_modules directories (prevents crashes importing JS/TS projects)
- try/catch around statSync for broken symlinks (warns and continues)
- Accept .mdx files alongside .md (extends to slugifyPath and isSyncable)

Co-Authored-By: mattbratos <mattbratos@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: init exits cleanly, auto-creates pgvector, updates Supabase UI hint

Three init improvements:
- process.stdin.pause() after reading URL input (prevents event loop hang)
- Auto-run CREATE EXTENSION IF NOT EXISTS vector with fallback message
- Update Supabase session pooler navigation hint to match current dashboard UI

Co-Authored-By: changergosum <changergosum@users.noreply.github.com>
Co-Authored-By: eric-hth <eric-hth@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* perf: parallelize keyword search with embedding pipeline

Run keyword search concurrently with the embed+vector pipeline instead of
sequentially. Keyword search has no embedding dependency so it can overlap
with the OpenAI API call, saving ~200-500ms per search.

Co-Authored-By: irresi <irresi@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: update Hermes Agent link to NousResearch GitHub repo

Co-Authored-By: howardpen9 <howardpen9@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* docs: add community PR wave process to CLAUDE.md

Documents the fix wave workflow: categorize, deduplicate, collector branch,
test, close with context, ship as one PR with attribution.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* chore: bump version and changelog (v0.6.1)

Community fix wave: 9 PRs re-implemented with full test coverage.
6 bug fixes, 1 perf improvement, 2 feature additions, 8 contributors.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* chore: migrate gstack from vendored to team mode

Remove vendored .claude/skills/gstack/ from git tracking. The global install
at ~/.claude/skills/gstack/ is the source of truth. Each developer runs
`cd ~/.claude/skills/gstack && ./setup` to set up symlink stubs locally.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* chore: untrack skill symlink stubs

These are generated locally by gstack's ./setup script. Not project code.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* docs: credit community contributors in CHANGELOG

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: update OpenClaw links from .com to .ai

openclaw.com is a parked page. openclaw.ai is the real product.

Co-Authored-By: joshua-morris <joshua-morris@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

---------

Co-authored-by: orendi84 <orendi84@users.noreply.github.com>
Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
Co-authored-by: mattbratos <mattbratos@users.noreply.github.com>
Co-authored-by: changergosum <changergosum@users.noreply.github.com>
Co-authored-by: eric-hth <eric-hth@users.noreply.github.com>
Co-authored-by: irresi <irresi@users.noreply.github.com>
Co-authored-by: howardpen9 <howardpen9@users.noreply.github.com>
Co-authored-by: joshua-morris <joshua-morris@users.noreply.github.com>
2026-04-10 19:34:01 -10:00
3e21e9b69b feat: GBrain v0.6.0 — Remote MCP Server + 12 Bug Fixes (#28)
* fix: 7 bug fixes from Issue #9 and #22

- fix(mcp): use ListToolsRequestSchema/CallToolRequestSchema instead of string literals (Issue #9, PR #25)
- fix(mcp): handleToolCall reads dry_run from params instead of hardcoding false (#22 Bug #11)
- fix(search): keyword search returns best chunk per page via DISTINCT ON, not all chunks (#22 Bug #8)
- fix(search): dedup layer 1 keeps top 3 chunks per page instead of collapsing to 1 (#22 Bug #12)
- fix(engine): transaction uses scoped engine via Object.create, no shared state mutation (#22 Bug #2)
- fix(engine): upsertChunks uses UPSERT instead of DELETE+INSERT, preserves existing embeddings (#22 Bug #1)
- fix(slugs): validateSlug normalizes to lowercase, pathToSlug lowercases consistently (#22 Bug #4)
- schema: add unique index on content_chunks(page_id, chunk_index) for UPSERT support
- schema: add access_tokens and mcp_request_log tables via migration

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: embed schema.sql at build time, remove fs dependency from initSchema

initSchema() previously read schema.sql from disk at runtime via readFileSync,
which broke in compiled Bun binaries and Deno Edge Functions. Now uses a
generated schema-embedded.ts constant (run `bun run build:schema` to regenerate).

- Removes fs and path imports from postgres-engine.ts and db.ts
- Adds scripts/build-schema.sh for one-source-of-truth generation
- Adds build:schema npm script

Fixes Issue #22 Bug #6.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: 5 more bug fixes from Issue #22

- fix(file_upload): call storage.upload() in all 3 paths (operation, CLI upload, CLI sync) with rollback semantics (#22 Bug #9)
- fix(import): use atomic index counter for parallel queue instead of array.shift() race, preserve checkpoint on errors (#22 Bug #3)
- fix(s3): replace unsigned fetch with @aws-sdk/client-s3 for proper SigV4 auth, supports R2/MinIO via forcePathStyle (#22 Bug #10)
- fix(redirect): verify remote file exists before deleting local copy, skip files not found in storage (#22 Bug #5)
- deps: add @aws-sdk/client-s3

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: remote MCP server via Supabase Edge Functions

Deploy GBrain as a serverless remote MCP endpoint on your existing Supabase
instance. One brain, accessible from Claude Desktop, Claude Code, Cowork,
Perplexity Computer, and any MCP client. Zero new infrastructure.

New files:
- supabase/functions/gbrain-mcp/index.ts — Edge Function with Hono + MCP SDK
- supabase/functions/gbrain-mcp/deno.json — Deno import map
- src/edge-entry.ts — curated bundle entry point (excludes fs-dependent modules)
- src/commands/auth.ts — standalone token management (create/list/revoke/test)
- scripts/deploy-remote.sh — one-script deployment
- .env.production.example — 3-value config template

Changes:
- config.ts: lazy-evaluate CONFIG_DIR (no homedir() at module scope)
- schema.sql: add access_tokens + mcp_request_log tables
- package.json: add build:edge script

Auth: bearer tokens via access_tokens table (SHA-256 hashed, per-client, revocable)
Transport: WebStandardStreamableHTTPServerTransport (stateless, Streamable HTTP)
Health: /health endpoint (unauth: 200/503, auth: postgres/pgvector/openai checks)
Excluded from remote: sync_brain, file_upload (may exceed 60s timeout)

Setup: clone, fill .env.production, run scripts/deploy-remote.sh, create token, done.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: per-client MCP setup guides

- docs/mcp/DEPLOY.md — deployment walkthrough, auth, troubleshooting, latency table
- docs/mcp/CLAUDE_CODE.md — claude mcp add command
- docs/mcp/CLAUDE_DESKTOP.md — Settings > Integrations (NOT JSON config!)
- docs/mcp/CLAUDE_COWORK.md — remote + local bridge paths
- docs/mcp/PERPLEXITY.md — Perplexity Computer connector setup
- docs/mcp/CHATGPT.md — coming soon (requires OAuth 2.1, P0 TODO)
- docs/mcp/ALTERNATIVES.md — Tailscale Funnel + ngrok self-hosted options

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: bump version and changelog (v0.6.0)

GBrain v0.6.0: Remote MCP server via Supabase Edge Functions + 12 bug fixes.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add Remote MCP Server section to README

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: make document-release mandatory in CLAUDE.md, add MCP key files

Post-ship requirements section: document-release is NOT optional. Lists every
file that must be checked on every ship. A ship without updated docs is incomplete.

Also adds remote MCP server files to Key files section.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: batch upsertChunks into single statement to prevent deadlocks

The per-chunk UPSERT loop caused deadlocks under parallel workers because
each INSERT ON CONFLICT acquired row-level locks sequentially. Multiple
workers upserting different pages could deadlock on the shared unique index.

Fix: batch all chunks into a single multi-row INSERT ON CONFLICT statement.
One round-trip, one lock acquisition. COALESCE preserves existing embeddings
when the new value is NULL.

Fixes CI failure: "E2E: Parallel Import > parallel import with --workers 4"

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: advisory lock in initSchema() prevents deadlock on concurrent DDL

When multiple processes call initSchema() concurrently (e.g., test setup +
CLI subprocess, or parallel workers during E2E tests), the schema SQL's
DROP TRIGGER + CREATE TRIGGER statements acquire AccessExclusiveLock on
different tables, causing deadlocks.

Fix: pg_advisory_lock(42) serializes all initSchema() calls within the
same database. The lock is session-scoped and released in a finally block.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: add explicit test timeouts for CLI subprocess E2E tests

CLI subprocess tests (Setup Journey, Doctor Command, Parallel Import)
spawn `bun run src/cli.ts` which takes several seconds to JIT compile +
connect. The Bun test framework default 5000ms per-test timeout is too
tight for CI. Added 30-60s timeouts matching each subprocess's own
timeout to prevent false failures.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: infinite recursion in config.ts exported getConfigDir/getConfigPath

The replace_all refactor created recursive functions: the exported
getConfigDir() called the private getConfigDir() which called itself.
Renamed exports to configDir()/configPath() to avoid shadowing.

Also adds scripts/smoke-test-mcp.ts — verified all 8 MCP tool calls
work against a real Postgres database.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-10 15:23:00 -10:00
27eb87f1f4 feat: slugify file paths with spaces and special characters (v0.5.1) (#29)
* feat: slugify file paths with spaces and special characters

Apple Notes files (e.g., "2017-05-03 ohmygreen.md") now get clean,
URL-safe slugs instead of raw filenames with spaces. Spaces become
hyphens, special chars are stripped, accented chars normalize to ASCII.

Both import (inferSlug) and sync (pathToSlug) pipelines now use the
same slugifyPath() function, eliminating the case-preservation mismatch.

* feat: one-time migration to slugify existing page slugs

Extends Migration interface with optional TypeScript handler for
application-level data transformations. Adds version 2 migration that
renames all existing slugs to their slugified form, including link
rewriting. Collision handling via try/catch + warning.

* test: slugify unit tests, E2E tests, and updated expectations

22 new unit tests for slugifySegment and slugifyPath covering spaces,
special chars, unicode, dots, empty segments, and all 4 bug report
examples. Updated pathToSlug tests for new lowercase behavior. Updated
E2E tests for slugified Apple Notes slugs. Added 2 new E2E tests for
space-named file import and sync.

* chore: bump version and changelog (v0.5.1)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* docs: fix changelog example to show directory with spaces

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-10 11:42:32 -07:00
e9f3c9c24d docs: live sync setup + verification runbook + API key loading (#24)
* docs: add SKILLPACK Section 18 — Live Sync (MUST ADD)

Contract-first guide for keeping the vector DB in sync with the brain
repo. Documents the pooler prerequisite (Session mode required for
transactions), sync + embed primitives, four example approaches (cron,
--watch, webhook, git hook), isSyncable exclusions, silent skip warning,
and OpenClaw/Hermes cron registration examples.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add GBRAIN_VERIFY.md installation verification runbook

Six-check runbook: schema (doctor), skillpack loaded, auto-update,
live sync (coverage check + embed check + end-to-end push-and-search
test), embedding coverage, brain-first lookup protocol. Emphasizes
"sync ran" != "sync worked" — the real test is searching for corrected
text after a push.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add setup Phases H (Live Sync) and I (Verification)

Phase H: MUST ADD live sync setup — pooler prerequisite check, automatic
sync configuration (agent picks approach), sync+embed chaining, coverage
verification. Phase I: run GBRAIN_VERIFY.md end-to-end before declaring
setup complete.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add install steps 8-9 (live sync + verification)

Step 8: set up automatic sync with SKILLPACK Section 18 reference.
Step 9: run GBRAIN_VERIFY.md runbook. Add GBRAIN_VERIFY.md to docs
section.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add API key loading instructions to CLAUDE.md

Source ~/.zshrc before running Tier 2 tests so OPENAI_API_KEY and
ANTHROPIC_API_KEY are available. Without this, embedding and skills
tests skip silently.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: bump version to v0.5.0

Live sync, verification runbook, API key loading instructions.
Version markers updated in SKILLPACK and RECOMMENDED_SCHEMA.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add anti-hand-roll rule to skill routing in CLAUDE.md

Explicitly prohibit manually running git commit + push + gh pr create
when /ship is available. /ship handles VERSION, CHANGELOG,
document-release, reviews, and coverage audit. Hand-rolling skips
all of these. Added "commit and ship" / "push and ship" variants
to the ship routing rule.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: changelog voice rule + rewrite 0.5.0 changelog to sell the upgrade

CLAUDE.md: add changelog voice guidance — lead with benefits, not
implementation details. Make users want to upgrade.

CHANGELOG: rewrite 0.5.0 entries from dry feature descriptions to
capability-focused bullets ("your brain never falls behind" not
"SKILLPACK Section 18 added").

SKILLPACK Section 17: update the auto-update message template to
instruct agents to sell the upgrade, not just summarize the diff.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add v0.5.0 migration directive for live sync + verification

Agents upgrading from v0.4.x will automatically: check their pooler
connection string, set up automatic sync, and run the verification
runbook. Without this migration file, upgrading agents would learn
about live sync (by re-reading Section 18) but wouldn't set it up.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: sharpen migration file guidance in CLAUDE.md

Replace vague "requires agent action" with concrete trigger list:
new setup steps existing users don't have, MUST ADD skillpack sections,
schema changes, deprecated commands, new verification steps, new crons.
Add the key test: "if an existing user upgrades and does nothing else,
will their brain work worse?"

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: make Section 17 upgrade flow work for direct user requests

Section 17 was structured as a cron-initiated flow only. An agent
handling "upgrade gbrain" might just run the command and stop, missing
the post-upgrade steps where the value is (re-read skills, run
migrations, schema sync). Added explicit entry point for direct
upgrade requests. Made Steps 2-4 more concrete about where to find
files and why migrations can't be skipped.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* test: add E2E sync tests — git-to-DB pipeline (11 tests)

Tests the full sync lifecycle against real Postgres+pgvector:
- First sync imports all pages from a git repo
- Second sync with no changes returns up_to_date
- Incremental sync picks up new files (add → commit → sync → verify)
- Incremental sync picks up modifications — THE CRITICAL TEST:
  corrected text appears in DB and keyword search after sync
- Incremental sync handles deletes
- Non-syncable files are excluded (README, .raw/, ops/)
- Sync state (last_commit, last_run) persisted to config
- Sync logged to ingest_log
- --full reimports everything
- --dry-run shows changes without applying

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: strengthen CLAUDE.md to always run ALL test tiers

Replace passive "source zshrc" suggestion with ALWAYS directive.
Explicitly state that "run all tests" means ALL tiers including
Tier 2 with API keys. Do not skip Tier 2 just because keys need
loading.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: Tier 2 E2E tests — correct openclaw CLI invocation

The tests used `openclaw -p` which doesn't exist. The correct command
is `openclaw agent --local --agent <id> --message <prompt>`. Also fixed
JSON output parsing (structured JSON goes to stderr, not stdout — use
non-JSON mode instead). Fixed ingest test to assert on agent response
text rather than test DB state (the agent writes to its own configured
DB, not the ephemeral test DB).

82 tests pass, 0 fail, 0 skip across all 5 E2E files.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-10 07:23:59 -10:00
f541f045d2 feat: add gbrain check-update command and auto-update agent workflow (#15)
* feat: add `gbrain check-update` command for auto-update notifications

Deterministic collector that checks GitHub Releases for new versions,
compares semver (minor+ only, skips patches), and fetches changelog diffs.
Exports `detectInstallMethod()` from upgrade.ts for reuse. Includes 15
unit tests covering version comparison, CLI wiring, and error handling.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* test: add E2E upgrade tests against real GitHub API

Exercises check-update CLI end-to-end: valid JSON output, human-readable
mode, help text, graceful no-releases handling, and version comparison
wiring. Skips gracefully when network is unavailable.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add SKILLPACK Section 17 — auto-update notifications

Full agent playbook for the update lifecycle: check, notify, consent,
upgrade, skills refresh, schema sync, report. Includes standalone
self-update for skillpack-only users via version markers and raw
GitHub URL fetching. Adds version markers to both SKILLPACK and
RECOMMENDED_SCHEMA headers.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add auto-update step 7 to install paste, setup Phase G, migrations dir

Adds step 7 to the OpenClaw install paste (default-on update checks).
Setup skill gets Phase G (conditional offer for manual installs) and
schema state tracking via ~/.gbrain/update-state.json. Creates
skills/migrations/ directory for version-specific upgrade directives.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update CLAUDE.md with E2E test DB lifecycle, migration conventions

Adds E2E test DB lifecycle instructions (spin up, run, tear down).
Documents version migration convention (skills/migrations/v[version].md)
and schema state tracking (~/.gbrain/update-state.json). Updates test
file counts.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: broken semver comparison in extractChangelogBetween

The version range check compared minor versions without guarding on
major being equal, causing incorrect changelog entries to be captured
(e.g., v0.5.0 would match when upgrading from v1.2.0). Extracted
semverGt/semverLte helpers for correct comparisons. Added 5 tests
for extractChangelogBetween covering cross-major, same-version, and
malformed input cases.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: bump version and changelog (v0.4.1)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-09 12:25:04 -10:00
912a321cfa GBrain v0.4.0 — production agent documentation + reference architecture (#10)
* fix: widen validateSlug to accept any filename characters

Git is the system of record. Slugs are lowercased repo-relative paths.
The restrictive regex rejected spaces, parens, and special chars, blocking
5,861 Apple Notes files from importing. Now only rejects empty slugs,
path traversal (..), and leading slash.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: enable RLS on all tables with BYPASSRLS safety check

Without RLS, the Supabase anon key gives full read access to the DB.
Enable RLS on all 10 tables with no policies — the postgres role
(used by gbrain via pooler) has BYPASSRLS and is unaffected. Only
enables if the current role actually has BYPASSRLS privilege to
avoid locking ourselves out on non-Supabase setups.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: import resilience — 5MB limit, error suppression, structured progress

Raise MAX_FILE_SIZE from 1MB to 5MB for Apple Notes with attachments.
Track error patterns and suppress after 5 identical errors to prevent
5,861 identical warnings from killing the agent process. Replace \r
progress bar with structured log lines (rate, ETA) for agent parsing.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: init detects IPv6-only Supabase URLs, adds pgvector check

Detect db.*.supabase.co direct URLs and warn about IPv6 failure.
On ECONNREFUSED/ETIMEDOUT to Supabase, suggest the Session pooler
connection string with exact dashboard click path. Check for pgvector
extension after connecting and fail with clear instructions if missing.
Update wizard hints to show pooler URL format.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add pre-ship requirement for E2E tests

E2E tests against real Postgres+pgvector must pass before /ship or
/review. Adds the requirement to CLAUDE.md so all agents enforce it.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: parallel import with per-worker engine instances

Refactor PostgresEngine to support instance-level DB connections instead
of only the module-global singleton. Each worker gets its own connection
with poolSize:2 (vs 10 for the main engine), so 8 workers = 16 connections.

Add --workers N flag to gbrain import. Workers pull from a shared queue
and use independent engine instances — no transaction context corruption.

The bottleneck is network round-trips to Supabase (one per page upsert).
Parallel workers cut import time proportionally.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: automatic schema migration runner

Migrations are embedded as string constants in migrate.ts (survives
Bun --compile). Each migration runs in a transaction for clean rollback
on failure. Runs automatically on initSchema() — no manual step needed
when a user updates the gbrain binary against an older DB.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: pluggable storage backend (S3 + Supabase Storage + local)

Add StorageBackend interface with three implementations:
- S3Storage: works with AWS S3, Cloudflare R2, MinIO (any S3-compatible)
- SupabaseStorage: uses Supabase Storage REST API with service role key
- LocalStorage: filesystem-based, for testing

Add file-resolver.ts with fallback chain: local file → .redirect
breadcrumb → .supabase marker → storage backend. Supports the
three-stage migration (mirror → redirect → clean).

Add yaml-lite.ts for parsing marker and breadcrumb files without
adding a YAML dependency.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: gbrain doctor command — health checks with --json output

Checks: connection, pgvector extension, RLS on all tables, schema
version, embedding coverage. Outputs structured JSON with --json flag
for agent parsing. Exit code 0 if healthy, 1 if issues found.

Agents should run gbrain doctor --json when any command fails.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: rewrite setup skill + README for agent-first DX

Setup skill: add Why Supabase, step-by-step project creation, explicit
agent instructions (nohup for large imports, doctor on failure, don't
ask for anon key), available init flags, file migration offer after
first import. Remove ClawHub references.

README: simplify to single OpenClaw install path, remove ClawHub, fix
squatted npm name to github:garrytan/gbrain, add Supabase settings
note about Session pooler.

Add Apple Notes test fixtures with spaces and parens in filenames for
E2E testing of the slug fix.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add RLS verification, schema health, and nohup hints to maintain skill

Maintenance skill now checks RLS status and schema version as part of
periodic health checks. Adds nohup pattern for large embedding refreshes.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: import resume checkpoint + Supabase smart URL parsing

Import resume: saves checkpoint every 100 files to ~/.gbrain/import-checkpoint.json.
On restart with same directory and file count, skips already-processed files.
Use --fresh to ignore checkpoint and start over. Cleared on successful completion.

Supabase admin: extractProjectRef() parses any Supabase URL format (dashboard,
direct, pooler, project URL) to extract the project ref. discoverPoolerUrl()
uses the Management API to find the correct pooler connection string (including
the exact region prefix). checkRls() verifies RLS status via the API.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* test: add 56 unit tests for all new code

8 new test files covering every feature added in this branch:
- slug-validation.test.ts: spaces, parens, unicode, path traversal (10 tests)
- yaml-lite.test.ts: parse + stringify, marker/redirect formats (9 tests)
- supabase-admin.test.ts: extractProjectRef for 4 URL formats (7 tests)
- migrate.test.ts: version export, runMigrations callable (2 tests)
- storage.test.ts: LocalStorage CRUD + createStorage factory (14 tests)
- file-resolver.test.ts: fallback chain, redirect, marker parsing (6 tests)
- import-resume.test.ts: checkpoint save/load/resume/fresh (6 tests)
- doctor.test.ts: module export, CLI registration (3 tests)

Total: 184 pass, 0 fail (up from 128).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: bulk chunk INSERT + E2E tests for all new features

Bulk INSERT: upsertChunks now builds a multi-row VALUES query instead
of inserting chunks one-by-one. Reduces DB round-trips by ~50x per page.

E2E tests added to mechanical.test.ts:
- Slug with special chars: import Apple Notes fixtures with spaces/parens,
  verify search finds them, verify idempotency
- RLS verification: check pg_tables.rowsecurity on all tables, verify
  current user has BYPASSRLS
- Doctor command: verify exit 0 on healthy DB, --json produces valid JSON
  with check structure
- Parallel import: --workers 2 produces same page count as sequential

Unit tests added:
- setup-branching.test.ts: IPv6 detection, defaultWorkers auto-tuning,
  smart URL parsing across all Supabase URL formats

Fixtures added:
- large/big-file.md (2.1MB) for testing raised file size limit
- apple-notes/ fixtures already existed

Total: 200 pass, 0 fail (up from 184).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: --json on init/import, file migration CLI, lifecycle tests

--json flag: init and import now support --json for structured output.
Agents get parseable JSON instead of human-readable text.

File migration CLI: implement mirror, unmirror, redirect, restore,
clean, and status subcommands for the three-stage file migration
lifecycle (local → mirrored → redirected → cloud-only).

File migration tests: full lifecycle test covering every transition
in the state machine (LOCAL → MIRROR → UNMIRROR → REDIRECT → RESTORE
→ CLEAN), including edge cases and file resolver at each stage.

Bulk chunk INSERT: upsertChunks now builds multi-row parameterized
VALUES query, reducing round-trips per page from ~50 to 1.

Total: 207 pass, 0 fail.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* test: thorough E2E tests for parallel import concurrency

Replace the weak single-comparison parallel import test with 7 tests:
- Sequential baseline: capture page count, chunk count, and all slugs
- --workers 2: verify page count matches sequential
- Chunk count matches (no duplicates from concurrent writes)
- Page slugs match exactly
- No duplicate pages (SQL GROUP BY HAVING count > 1)
- No duplicate chunks (SQL GROUP BY page_id, chunk_index)
- --workers 4: also works correctly
- Re-import with workers is idempotent

These tests catch the exact bug Codex found (db.ts singleton causing
concurrent transaction corruption) by verifying data integrity after
parallel writes.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add batch embedding queue as P1 TODO

Deferred during eng review (per-worker embedding is good enough for now).
Revisit after profiling real imports to confirm embedding is the bottleneck.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: E2E test failures — fixture counts, arg parsing, doctor exit code

Fix fixture count assertions: 13 → 16 pages (added apple-notes + large file),
companies 2 → 3 (ohmygreen), concepts 3 → 5 (notes, big-file).

Fix --workers arg parsing: the worker count value (e.g. "2") was being
picked up as the directory arg. Skip flag values when finding the dir.

Fix doctor exit code: warnings (like missing embeddings) should exit 0,
only actual failures exit 1. E2E tests import with --no-embed, so
embeddings are always WARN.

Fix E2E CLI tests: add initCli() before doctor and parallel import
tests so ~/.gbrain/config.json exists for the subprocess.

All E2E tests pass: 63 pass, 0 fail.
All unit tests pass: 207 pass, 0 fail.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update project documentation for v0.4.0

New CHANGELOG entry for all post-0.3.0 features (doctor, storage backends,
parallel import, resume checkpoints, RLS, schema migrations, --json output).
Version bumped 0.3.0 → 0.4.0 across all manifests.

CLAUDE.md: test count 9→19, skill count 8→7, added key files.
CONTRIBUTING.md: fixture count 13→16, added missing source files.
README.md: added gbrain doctor to commands, fixed stale welcome PRs.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* docs: add GBRAIN_SKILLPACK.md reference architecture

Production agent patterns from a real deployment with 14,700+ brain files.
Covers: entity detection on every message, brain-first lookup protocol,
7-step enrichment pipeline with tiered API spend, compiled truth + timeline,
source attribution with mandatory citations, meeting ingestion with entity
propagation, cron schedule with quiet hours and travel-aware timezone,
YouTube/media ingestion via Diarize.io, integration guides for ClawVisor,
Circleback webhooks, and Quo/OpenPhone SMS. Opens with the Vannevar Bush
memex framing and the originals folder for capturing intellectual capital.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: rewrite README opener with memex pitch and production architecture

Replace code-first opener with mimetic-desire pitch: Vannevar Bush memex
tagline, production brain numbers (10K+ files, 3K+ people, 13 years of
calendar), "ask it anything" examples, compounding thesis.

New sections: The Compounding Thesis (read-write loop), Architecture
(three-column diagram), What a Production Agent Looks Like (SKILLPACK
reference), How gbrain fits with OpenClaw (three-layer complement).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update skills with brain-first lookup, entity detection, heartbeat

setup: Phase D rewritten with brain-first lookup protocol (gbrain search
→ query → get → grep fallback), sync-after-write rule, memory_search
complement table.

query: token-budget awareness (chunks not full pages), source precedence
hierarchy (user > compiled truth > timeline > external).

ingest: entity detection on every message (scan, check brain, create or
enrich, commit and sync).

maintain: heartbeat integration (doctor, embed --stale, sync verification,
stale compiled truth detection).

briefing: gbrain-native context loading (search attendees before meetings,
search sender before email, daily deal/meeting/commitment queries).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add OpenClaw positioning to README opener

Make it clear up top that GBrain is built for OpenClaw agents and
works with any OpenClaw deployment.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: credit Karpathy's Knowledge LLM vision, add origin story

GBrain started as Karpathy's LLM wiki idea built for real. Worked great
until the brain hit thousands of files and grep fell apart. GBrain is the
search layer that had to exist once the brain outgrew grep.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-09 10:17:13 -07:00
a86f995883 feat: GBrain v0.3.0 — contract-first architecture + ClawHub plugin (#7)
* feat: contract-first operations.ts with OperationError, dry_run, importFromContent

30 shared operations as single source of truth for CLI and MCP.
- OperationError with typed error codes (page_not_found, invalid_params, etc.)
- dry_run support on all mutating operations
- importFromContent split from importFile with transaction wrapping
- Idempotency hash now includes ALL fields (title, type, frontmatter, tags)
- Config env var fallback: GBRAIN_DATABASE_URL > DATABASE_URL > config file

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* refactor: rewrite MCP server + CLI + tools-json from operations

server.ts: 233 -> ~80 lines. Tool definitions and dispatch generated from operations[].
cli.ts: shared operations auto-registered, CLI-only commands kept as manual dispatch.
tools-json: generated FROM operations[], eliminating the third contract surface.
Parity test verifies structural contract between operations, CLI, and MCP.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* refactor: delete 12 command files migrated to operations.ts

Handler logic for get, put, delete, list, search, query, health, stats,
tags, link, timeline, and version now lives in operations.ts.
Kept: init, upgrade, import, export, files, embed, sync, serve, call, config.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: init --non-interactive, upgrade verification, schema migration

- gbrain init --non-interactive --url <url> for plugin mode (no TTY required)
- Post-upgrade version verification in gbrain upgrade
- Drop storage_url from files table (storage_path is the only identifier)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: tool-agnostic skills + new setup skill

All 7 skills rewritten with intent-based language instead of CLI commands.
Works with both CLI and MCP plugin contexts.
New setup skill replaces install: auto-provision Supabase via CLI,
AGENTS.md injection, target TTHW < 2 min.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: ClawHub bundle plugin, CI workflows, v0.3.0

- openclaw.plugin.json with configSchema, MCP server config, skill listing
- GitHub Actions: test on push/PR, multi-platform release (macOS arm64 + Linux x64)
- Version bump 0.3.0, CHANGELOG, README ClawHub section, CLAUDE.md updated

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: idempotency hash mismatch + MCP dry_run passthrough

importFromContent now passes its all-fields hash through putPage via
content_hash on PageInput, so the stored hash matches the computed hash.
Previously the skip-if-unchanged check never fired because the hash
formulas differed.

MCP server now passes dry_run from tool params to OperationContext.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: bump version and changelog (v0.3.0.0)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: schema loader handles PL/pgSQL $$ blocks

Delete the semicolon-based SQL splitter in db.ts which broke on
PL/pgSQL trigger functions containing semicolons inside $$ delimiter
blocks. Use single conn.unsafe(schemaSql) call instead — the postgres
driver handles multi-statement SQL natively. schema.sql already uses
IF NOT EXISTS / CREATE OR REPLACE for idempotency.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* feat: E2E test infrastructure + realistic brain fixtures

Add test infrastructure for running E2E tests against real
Postgres+pgvector. Includes:
- test/e2e/helpers.ts: DB lifecycle, fixture import, timing, diagnostics
- 13 fixture files as a miniature realistic brain (people, companies,
  deals, meetings, concepts, projects, sources) following the
  compiled truth + timeline format from GBRAIN_RECOMMENDED_SCHEMA.md
- docker-compose.test.yml: local pgvector convenience (port 5433)
- .env.testing.example: template for test credentials
- package.json: add test:e2e script

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* feat: E2E test suites + CI workflow

Tier 1 (mechanical.test.ts): 14 test suites covering all operations
against real Postgres — page CRUD, search with quality scoring, links,
tags, timeline, versions, admin, chunks, resolution, ingest log, raw
data, files, idempotency stress, setup journey (full CLI flow), init
edge cases, schema idempotency, schema diff guard, performance baselines.

Tier 1 (mcp.test.ts): MCP protocol test — spawns server, sends JSON-RPC,
verifies tools/list matches operations count.

Tier 2 (skills.test.ts): OpenClaw skill tests — ingest, query, health.
Skips gracefully when dependencies missing.

CI (.github/workflows/e2e.yml): Tier 1 on every PR (pgvector service),
Tier 2 nightly/manual with API key secrets.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: E2E test fixes + traverseGraph jsonb cast

- Fix traverseGraph query: cast json_agg to jsonb_agg so SELECT DISTINCT works
- Fix put_page tests to use importFromContent with noEmbed (no OpenAI key in Tier 1)
- Fix get_health assertion (page_count not total_pages)
- Fix raw_data test to handle JSONB string/object return
- Simplify MCP test to verify tool generation directly
- Add timeouts to CLI subprocess tests
- Use port 5434 for docker-compose (5433 often in use)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* docs: update all project docs for E2E test suite

- CLAUDE.md: updated test count (9 unit + 3 E2E), added E2E test
  instructions, fixed skill count to 8
- CONTRIBUTING.md: updated project structure with test/e2e/, added E2E
  test instructions, rewrote "Adding a new command" to reflect
  contract-first architecture (add to operations.ts, done)
- README.md: fixed table count (10 not 9), added recommended schema doc
  to Docs section, added E2E instructions to Contributing section
- CHANGELOG.md: added E2E test suite, docker-compose, schema loader fix,
  and traverseGraph jsonb fix to v0.3.0 entry

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-08 23:26:11 -10:00
ecebd5552a feat: GBrain v0.2.0 — incremental sync, file storage, install skill (#2)
* refactor: extract importFile from import.ts + add tag reconciliation

Shared single-file import function used by both import and sync.
Adds tag reconciliation (removes stale tags on reimport), >1MB file
skip, and import->sync checkpoint continuity (writes git HEAD to
config table after import so sync picks up seamlessly).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add sync pure functions, updateSlug engine method, and sync tests

- buildSyncManifest: parses git diff --name-status -M output
- isSyncable: filters to .md pages, excludes hidden/ops/.raw/skip-list
- pathToSlug: converts file paths to page slugs with optional prefix
- updateSlug: renames page slug in-place (preserves page_id, chunks, embeddings)
- rewriteLinks: stub for v0.2 (FKs use page_id, already correct)
- 20 new tests, all passing (39 total across 3 files)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add gbrain sync command with CLI, MCP, and watch mode

18-step sync protocol: read config, git pull, ancestry validation,
git diff --name-status -M for net changes, isSyncable filter, process
deletes/renames/adds/modifies via importFile, batch optimization,
sync state checkpoint in Postgres config table. Watch mode with
polling and consecutive error counter. MCP sync_brain tool returns
structured SyncResult. Stale page deletion for un-syncable files.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add files table, gbrain files commands, and config show redaction

- files table: page_slug FK with ON DELETE SET NULL + ON UPDATE CASCADE,
  storage_path, storage_url, mime_type, content_hash for dedup
- gbrain files list/upload/sync/verify commands for Supabase Storage
- gbrain config show redacts postgresql:// passwords and secret keys
- CLI help updated with FILES section

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add install skill for GBrain onboarding

6-phase install workflow: environment discovery, Supabase setup (magic
path via CLI OAuth or fallback 2-copy-paste), init + import, ongoing
sync cron, optional file migration with mandatory verification, and
agent teaching (AGENTS.md rules). Every error gets what + why + fix.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: update project documentation for v0.2.0

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add v0.2 features to README (sync, files, install skill)

README.md: added sync command to IMPORT/EXPORT section, added FILES
section with 4 commands, added files table to schema diagram, added
install skill to skills table, updated MCP tools count from 20 to 21
(sync_brain added).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: OpenClaw DX improvements (skill count, upgrade docs, config show help)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* refactor: consolidate version to single source of truth

Create src/version.ts that reads from package.json via static import
(safe for bun compiled binaries). Update mcp/server.ts from hardcoded
'0.1.0' to use shared VERSION. Bump skills/manifest.json to 0.2.0.

* fix: upgrade detection order, npm→bun naming, clawhub false positives

Reorder detection: node_modules first, binary second, clawhub last.
Rename 'npm' install method to 'bun'. Use 'clawhub --version' instead
of 'which clawhub' to avoid false positives from dangling symlinks.
Add 120s timeout to execSync calls to prevent hanging. Add --help flag.

* feat: per-command --help, unknown command check before DB connection

Add COMMAND_HELP map covering all 28 commands. Check --help before
init/upgrade dispatch and before connectEngine() so help works without
a database. Use COMMAND_HELP keys as known-command set to catch unknown
commands before wasting a DB round-trip.

* docs: standardize npm references to bun, add Upgrade section to README

Fix init.ts: npx→bunx, npm→bun for supabase CLI guidance.
Fix README: npm install→bun add for standalone CLI install.
Add ## Upgrade section to README with all three install methods.
Update install skill Upgrading section to list bun, ClawHub, and binary.

* test: full coverage audit — CLI dispatch, upgrade detection, config, edge cases

New test files:
- test/cli.test.ts: COMMAND_HELP ↔ switch consistency, version from
  package.json, per-command --help, unknown command handling, global help
- test/upgrade.test.ts: detection order verification, npm→bun naming,
  clawhub --version (not which), timeout presence
- test/config.test.ts: redactUrl for postgresql URLs, edge cases

Extended existing tests:
- test/sync.test.ts: empty string pathToSlug, uppercase .MD rejection,
  deeply nested files, multiple renames, unknown status codes
- test/markdown.test.ts: multiple --- separators, missing frontmatter,
  no frontmatter at all, empty string, type inference from paths

Tests: 39 → 83 (+44 new). All pass.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* test: 100% coverage — import-file mock engine, files utils, chunker edge cases

New test files:
- test/import-file.test.ts (9 tests): mock BrainEngine to test importFile
  without DB — MAX_FILE_SIZE skip, content_hash dedup, tag reconciliation
  (remove stale + add new), compiled_truth/timeline chunking, noEmbed flag,
  sequential chunk_index
- test/files.test.ts (22 tests): getMimeType for all extensions + uppercase
  + unknown + no-extension, fileHash consistency + different content + empty,
  collectFiles pattern (skip .md, skip hidden dirs, recurse, sorted output)

Extended:
- test/chunkers/recursive.test.ts (+6 tests): single newline splits,
  word-only text, clause delimiters, lossless preservation, default options,
  mixed delimiter hierarchy

Tests: 83 → 118 (+35 new). All pass.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-06 16:50:15 -07:00
b22cbd349a feat: GBrain v0.1.0 — Postgres-native personal knowledge brain (#1)
* chore: add CLAUDE.md with project context and gstack skill routing rules

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: initialize project with Bun + TypeScript

package.json with dependencies (postgres, pgvector, openai, anthropic,
MCP SDK, gray-matter). TypeScript config targeting ESNext with bundler
module resolution.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add foundation layer — engine interface, Postgres engine, schema

BrainEngine pluggable interface with full PostgresEngine: CRUD, search
(keyword + vector), links, tags, timeline, versions, stats, health,
ingest log, config. Trigger-based tsvector spanning pages +
timeline_entries. Markdown parser with frontmatter, compiled_truth /
timeline splitting, and round-trip serialization. 19 tests passing.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add 3-tier chunking and embedding service

Recursive delimiter-aware chunker (5-level hierarchy, 300-word chunks,
50-word overlap). Semantic chunker with Savitzky-Golay boundary detection
and recursive fallback. LLM-guided chunker via Claude Haiku with sliding
window topic detection. OpenAI embedding service with batch support,
exponential backoff, and rate limit handling.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add hybrid search with RRF fusion, expansion, and 4-layer dedup

Hybrid search merges vector (pgvector HNSW) + keyword (tsvector) via
Reciprocal Rank Fusion. Multi-query expansion via Claude Haiku generates
2 alternative phrasings. 4-layer dedup pipeline: by source, cosine
similarity, type diversity (60% cap), per-page cap.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add GBRAIN_V0 spec, pluggable engine architecture, SQLite engine plan

GBRAIN_V0.md: full product spec with architecture decisions, CLI commands,
schema, search architecture, chunking strategies, first-time experience,
and future plans. ENGINES.md: pluggable engine interface, capability matrix,
how to add new backends. SQLITE_ENGINE.md: complete SQLite implementation
plan with schema, FTS5 setup, vector search options, and contributor guide.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add CLI with all commands

Full CLI dispatcher with 25+ commands: init (Supabase wizard), get, put,
delete, list, search, query (hybrid RRF), import (bulk with progress bar),
export (round-trip), embed, stats, health, tag/untag/tags, link/unlink/
backlinks/graph, timeline/timeline-add, history/revert, config, upgrade,
serve, call. Smart slug resolution on reads. Version snapshots on updates.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add MCP stdio server with all brain tools

20 MCP tools mirroring CLI operations: get/put/delete/list pages,
search (keyword), query (hybrid RRF + expansion), tags, links with
graph traversal, timeline, stats, health, version history, and revert.
Auto-chunks and embeds on put_page. CLI and MCP share the same engine.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add 6 skill files and ClawHub manifest

Fat markdown skills for AI agents: ingest (meetings/docs/articles with
timeline merge), query (3-layer search + synthesis + citations), maintain
(health checks, stale detection, orphan audit), enrich (external API
enrichment), briefing (daily briefing compilation), migrate (universal
migration from Obsidian/Notion/Logseq/markdown/CSV/JSON/Roam).
ClawHub manifest for skill distribution.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add README, CONTRIBUTING, update CLAUDE.md test references

README with quickstart, commands, architecture, library usage, MCP setup,
and links to design docs. CONTRIBUTING with setup, project structure,
and guides for adding commands and engines. CLAUDE.md updated to reference
actual test files instead of planned-but-unwritten import test.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: address adversarial review findings — 5 critical/high fixes

- revertToVersion: add page_id check to prevent cross-page data corruption
- traverseGraph: use UNION instead of UNION ALL for cycle safety
- embedAll: preserve all chunks when embedding stale subset only
- embedding: throw on retry exhaustion instead of returning zero vectors
- putPage: validate slugs to prevent path traversal on export

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: bump version and changelog (v0.1.0)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: expand README with schema, install, search architecture, and motivation

Why it exists, how search works (with ASCII diagram), full database schema
with all 9 tables and index details, chunking strategies explained, storage
estimates, setup wizard walkthrough, knowledge model with example page,
library usage with more examples, expanded skills table.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: add MIT license (Copyright 2026 Garry Tan)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add OpenClaw install flow as primary option in README

OpenClaw users just say "install gbrain" and the orchestrator handles
everything: package install, Supabase setup wizard, skill registration.
Shows the conversational interface for querying, ingesting, and briefings.
ClawHub and standalone CLI paths follow as alternatives.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add prerequisites and explicit OpenClaw install instructions

Prerequisites table listing Supabase, OpenAI, and Anthropic dependencies
with links. Environment variable setup. Explicit step-by-step prompt for
OpenClaw users showing exactly what to tell the orchestrator. Note that
search degrades gracefully without API keys (keyword-only without OpenAI,
no expansion without Anthropic).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: scrub named references, add PG essay demo section to README

Replace all Pedro/Brex/Jensen Huang/River AI examples with Paul Graham
essay examples using the kindling corpus. Add "Try it" section to README
showing the power of hybrid search on PG essays in 90 seconds. Update
test fixtures to use concept pages instead of person pages.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-05 12:48:10 -07:00