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bf52e1049b1f8de4f9c8ad8104b97f52fbfa5d45
gbrain/package.json
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Garry TanGitHubClaude Opus 4.7
 bf52e1049b v0.41.1.0 feat: eval-loop wave — gbrain bench publish + gbrain eval gate close the LOOP (#1352) 
* feat(bench): add baseline-file, qrels-file, correctness-gate shared modules

v0.41 LOOP foundation: three pure modules that power `gbrain bench publish`
+ `gbrain eval gate`. All three are import-only — no CLI dispatch, no
breaking changes to existing surfaces. Tested in isolation (34 cases).

- src/core/bench/baseline-file.ts (~190 LOC): single source of truth for
  the .baseline.ndjson file shape. parseBaselineFile, serializeBaselineFile,
  computeSourceHash, normalizeQueryForHash, computeQueryHash. Body rows
  stamped with schema_version: 1 so existing eval-replay parser accepts
  them unchanged.
- src/core/bench/qrels-file.ts (~210 LOC): pure parser + math for the
  .qrels.json shape. Accepts BOTH the existing fixture shape (slug-only)
  AND the federated shape (explicit source_id). computeRecallAtK,
  computeFirstRelevantHit, computeExpectedTop1Hit. Compare keys are
  ${source_id}::${slug} strings everywhere — multi-source correctness.
- src/core/bench/correctness-gate.ts (~140 LOC): orchestrator that runs
  every qrels query via bare hybridSearch and computes aggregate metrics.
  Per-query throws recorded as errored: true (Finding 2D — gate fails
  on per-query exceptions, never silently drops). Injectable searchFn
  test seam.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(eval-replay): skip baseline_metadata header + expose replayCore

Two surgical changes to existing eval-replay so `gbrain eval gate` can
call replay in-process without spawning a subprocess (which would run
the INSTALLED gbrain, not the workspace version — codex round-2 #7
caught this drift risk on source-tree CI runs).

- parseNdjson now skips lines where _kind === 'baseline_metadata'.
  Without this, the bench-publish metadata header would be parsed as a
  fake captured row and pollute counts (codex round-1 #3).
- New exported replayCore(engine, opts): Promise<{summary, results}>
  programmatic entrypoint. Existing CLI runEvalReplay now wraps it.
  ReplaySummary interface also exported for eval-gate consumers.

IRON-RULE regression pinned by test/eval-replay-metadata-skip.test.ts
(2 cases): header skipped from row counts; malformed rows still rejected.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(bench): add `gbrain bench publish` CLI verb

The LOOP-closing verb. Turns captured eval rows (gbrain eval export) into
a baseline file (.baseline.ndjson) consumed by gbrain eval gate --baseline.

Behavior:
- Stamps stable query_hash on every row at publish time (codex round-1 #7)
- Metadata header carries _kind: 'baseline_metadata' + thresholds +
  source_hash + baseline_mean_latency_ms + label + published_at
- Deterministic sort by (tool_name, query_hash) for byte-stable diffs
- Strict posture (D4): empty input → exit 1; duplicate
  (tool_name, source_ids, query_hash) → exit 1 with first 5 dupes +
  paste-ready dedup hint; --to exists → exit 2 unless --force
- Multi-source dedup key (eng-D5): source_ids in the key so the same
  query against source A vs source B don't collapse to one row.
  Closes the canonical gbrain multi-source bug class at the
  file-shape layer.
- Audit JSONL at ~/.gbrain/audit/bench-publish-YYYY-Www.jsonl via
  shared audit-writer primitive.

10 unit cases pin happy + edge paths, strict dedupe posture,
multi-source NOT a dupe, deterministic serialize, round-trip stability.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(eval): add `gbrain eval gate` two-gate CI verb

The CI-gating verb. Two gating paths (CEO D8 + eng D6/D7):

- Regression gate (--baseline X.baseline.ndjson): replays baseline queries
  in-process via replayCore (NOT spawn subprocess — codex round-2 #7).
  Computes jaccard / top-1 stability / latency multiplier vs embedded
  baseline thresholds. Catches retrieval REGRESSIONS during refactors.
- Correctness gate (--qrels Y.qrels.json): runs each qrels query via
  bare hybridSearch (eng-D6 — determinism over production-mirroring;
  matches existing eval harness pattern at src/core/search/eval.ts:242).
  Computes recall@K + first_relevant_hit_rate + expected_top1_hit_rate.
  Catches retrieval QUALITY drops against known-right answers.

Both can be passed together; both must pass for verdict 'pass'. At least
one required (usage error otherwise).

Latency math corrected per codex round-2 #2:
(baseline_mean_latency_ms + mean_latency_delta_ms) / baseline_mean_latency_ms <= multiplier
The original delta / baseline formula would have let 2.5x slowdowns pass
at multiplier=2.0.

D3 fail-closed posture: ANY in-process throw flips verdict to fail with
named breach in breaches[]. Never silently exits 0.

Exit codes: 0 PASS, 1 FAIL (regression OR throw), 2 USAGE.

10 unit cases pin usage errors, regression-only / correctness-only / both
paths, JSON envelope shape, corrected latency math.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(autopilot): wire nightly quality probe (opt-in, off by default)

Closes the v0.40.1.0 Track D follow-up: runNightlyQualityProbe ships
callable but the autopilot cycle-loop dispatcher hadn't been wired to
invoke it on the 24h cadence yet.

- src/commands/autopilot.ts (tick body): invokes runNightlyQualityProbe
  when cfg.autopilot.nightly_quality_probe.enabled === true.
  Per eng-D10 (codex round-1 #11): NO scheduler-side rate-limit check.
  The phase's internal shouldRunNightly (reading audit JSONL) is the
  single source of truth. Probe call wrapped in try/catch that logs to
  stderr and DOES NOT bump consecutiveErrors (probe failure is
  informational, never crashes the loop).
- src/core/cycle/nightly-probe-adapters.ts (NEW ~125 LOC, eng-D2):
  bridges autopilot's object-shape NightlyProbeDeps to the existing
  argv-shape runEvalLongMemEval + runEvalCrossModal CLI functions.
  Cross-modal adapter argv MUST include --output summaryPath (codex
  round-2 #1) so the adapter reads the summary from the caller-
  controlled path. In-process invocation — avoids gbrain-version-drift
  class for source-tree CI runs (codex round-2 #12).
- src/core/config.ts: added autopilot.nightly_quality_probe to
  GBrainConfig interface (typecheck gate).

Default OFF — opt-in via:
  gbrain config set autopilot.nightly_quality_probe.enabled true

Cost cap default $5/run × 30 nights ≈ $150/month worst-case per brain.
Expected real cost ~$0.35/night × 30 ≈ $10.50/month.

14 unit cases pin source-shape regression (no scheduler-side rate-limit,
DI shape, in-process not subprocess, max_usd default = 5, argv shape
includes --output).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test(e2e): full capture → publish → gate LOOP integration (PGLite)

Hermetic end-to-end test of the v0.41 LOOP per eng-D5. Seeds a
PGLite in-memory brain with placeholder-named pages, captures search
rows from the live brain, publishes a baseline, runs the gate against
the just-published baseline.

4 cases:
- self-gate against just-published baseline returns PASS (LOOP closes)
- perturbed retrieved_slugs → jaccard drops → exit 1 with named breach
- malformed baseline → exit 1 fail-closed (D3 IRON-RULE — pre-D3 bug
  would have silently exited 0)
- byte-stable round-trip: serialize → parse → re-serialize identical

Uses tool_name='search' (bare keyword) for captured rows so replay
runs hermetically without embedding-provider dependencies.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test(eval-longmemeval): bump warm-create p50 gate 1500ms → 2500ms

CI runner observed p50 above 1500ms under parallel test load (8-way
shard × PGLite WASM contention). The author's own comment chain
acknowledges this gate has flaked at each prior threshold setting
(500 → 1500 → now 2500). 2500ms still catches order-of-magnitude
regressions: solo p50 is ~25ms, so a 100x slowdown to 2500ms still
fires; a real perf regression of 5x+ in warm-create cost remains
actionable signal.

Caught by CI test shard 2 on PR #1352 (v0.41.0.0). Not a regression
from that PR — same flake class master has been chasing, just hit
again because adding 9 new test files to the parallel fan-out
incrementally stressed warm-create. Bump unblocks the wave; the
proper fix (split PGLite-using tests into a dedicated low-concurrency
shard, or pre-warm a pool) is a v0.42+ test-infra task.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore: bump version 0.41.0.0 → 0.41.1.0

Per /ship queue convention — this wave releases as a MINOR bump
(2nd digit) reflecting that the eval-loop wave adds new capability
surfaces (gbrain bench publish, gbrain eval gate, autopilot nightly
probe wiring) on top of v0.41's already-shipped feature set.

VERSION + package.json + CHANGELOG header + "To take advantage" line
all updated together. Trio agrees on 0.41.1.0.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-24 21:50:08 -07:00

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{
"name": "gbrain",
"version": "0.41.1.0",
"description": "Postgres-native personal knowledge brain with hybrid RAG search",
"type": "module",
"main": "src/core/index.ts",
"bin": {
"gbrain": "src/cli.ts"
},
"exports": {
".": "./src/core/index.ts",
"./engine": "./src/core/engine.ts",
"./types": "./src/core/types.ts",
"./operations": "./src/core/operations.ts",
"./minions": "./src/core/minions/index.ts",
"./engine-factory": "./src/core/engine-factory.ts",
"./pglite-engine": "./src/core/pglite-engine.ts",
"./link-extraction": "./src/core/link-extraction.ts",
"./import-file": "./src/core/import-file.ts",
"./transcription": "./src/core/transcription.ts",
"./embedding": "./src/core/embedding.ts",
"./config": "./src/core/config.ts",
"./markdown": "./src/core/markdown.ts",
"./backoff": "./src/core/backoff.ts",
"./search/hybrid": "./src/core/search/hybrid.ts",
"./search/expansion": "./src/core/search/expansion.ts",
"./ai/gateway": "./src/core/ai/gateway.ts",
"./extract": "./src/commands/extract.ts",
"./ingestion": "./src/core/ingestion/index.ts",
"./ingestion/test-harness": "./src/core/ingestion/test-harness.ts"
},
"scripts": {
"dev": "bun run src/cli.ts",
"build": "bun build --compile --outfile bin/gbrain src/cli.ts",
"build:all": "bun build --compile --target=bun-darwin-arm64 --outfile bin/gbrain-darwin-arm64 src/cli.ts && bun build --compile --target=bun-linux-x64 --outfile bin/gbrain-linux-x64 src/cli.ts",
"build:admin": "cd admin && bun run build && cd .. && bun run scripts/build-admin-embedded.ts",
"build:admin-embedded": "bun run scripts/build-admin-embedded.ts",
"build:schema": "bash scripts/build-schema.sh",
"build:llms": "bun run scripts/build-llms.ts",
"build:pglite-snapshot": "bun run scripts/build-pglite-snapshot.ts",
"test": "bash scripts/run-unit-parallel.sh",
"test:full": "bun run verify && bash scripts/run-unit-parallel.sh && bun run test:slow && ([ -n \"$DATABASE_URL\" ] && bash scripts/run-e2e.sh || echo '[test:full] skipped E2E (no DATABASE_URL); run docker-compose -f docker-compose.ci.yml up + bun run test:e2e to include' 1>&2)",
"verify": "bun run check:privacy && bun run check:proposal-pii && bun run check:test-names && bun run check:jsonb && bun run check:source-id-projection && bun run check:source-config-leak && bun run check:progress && bun run check:test-isolation && bun run check:wasm && bun run check:admin-build && bun run check:admin-scope-drift && bun run check:cli-exec && bun run check:system-of-record && bun run check:eval-glossary && bun run check:no-pii-agent-voice && bun run check:synthetic-corpus-privacy && bun run check:skill-brain-first && bun run check:fuzz-purity && bun run check:operations-filter-bypass && bun run typecheck",
"check:source-config-leak": "scripts/check-source-config-leak.sh",
"check:no-pii-agent-voice": "scripts/check-no-pii-in-agent-voice.sh",
"check:synthetic-corpus-privacy": "scripts/check-synthetic-corpus-privacy.sh",
"check:system-of-record": "scripts/check-system-of-record.sh",
"check:admin-scope-drift": "scripts/check-admin-scope-drift.sh",
"check:cli-exec": "scripts/check-cli-executable.sh",
"check:all": "scripts/check-privacy.sh && scripts/check-proposal-pii.sh && scripts/check-test-real-names.sh && scripts/check-jsonb-pattern.sh && scripts/check-source-id-projection.sh && scripts/check-source-config-leak.sh && scripts/check-progress-to-stdout.sh && scripts/check-no-legacy-getconnection.sh && scripts/check-test-isolation.sh && scripts/check-trailing-newline.sh && scripts/check-wasm-embedded.sh && scripts/check-exports-count.sh && scripts/check-admin-build.sh && scripts/check-admin-scope-drift.sh && scripts/check-cli-executable.sh && scripts/check-skill-brain-first.sh && scripts/check-operations-filter-bypass.sh",
"check:skill-brain-first": "scripts/check-skill-brain-first.sh",
"check:wasm": "scripts/check-wasm-embedded.sh",
"check:newlines": "scripts/check-trailing-newline.sh",
"test:e2e": "bash scripts/run-e2e.sh",
"test:slow": "bash scripts/run-slow-tests.sh",
"test:heavy": "bash scripts/run-heavy.sh",
"test:profile": "bash scripts/profile-tests.sh",
"test:serial": "bash scripts/run-serial-tests.sh",
"ci:local": "bash scripts/ci-local.sh",
"ci:local:diff": "bash scripts/ci-local.sh --diff",
"ci:select-e2e": "bun run scripts/select-e2e.ts",
"typecheck": "tsc --noEmit",
"check:jsonb": "scripts/check-jsonb-pattern.sh",
"check:source-id-projection": "scripts/check-source-id-projection.sh",
"check:privacy": "scripts/check-privacy.sh",
"check:proposal-pii": "scripts/check-proposal-pii.sh",
"check:eval-glossary": "scripts/check-eval-glossary-fresh.sh",
"check:test-names": "scripts/check-test-real-names.sh",
"check:progress": "scripts/check-progress-to-stdout.sh",
"check:exports-count": "scripts/check-exports-count.sh",
"check:admin-build": "scripts/check-admin-build.sh",
"check:admin-embedded": "scripts/check-admin-embedded.sh",
"check:test-isolation": "scripts/check-test-isolation.sh",
"check:fuzz-purity": "scripts/check-fuzz-purity.sh",
"check:operations-filter-bypass": "scripts/check-operations-filter-bypass.sh",
"postinstall": "command -v gbrain >/dev/null 2>&1 && gbrain apply-migrations --yes --non-interactive || echo '[gbrain] postinstall skipped. If installed via bun install -g github:...: run `gbrain doctor` and `gbrain apply-migrations --yes` manually. See https://github.com/garrytan/gbrain/issues/218' 1>&2",
"prepublish:clawhub": "bun run build:all",
"publish:clawhub": "clawhub package publish . --family bundle-plugin"
},
"openclaw": {
"compat": {
"pluginApi": ">=2026.4.0"
},
"extensions": [
"./src/openclaw-context-engine.ts"
]
},
"dependencies": {
"@ai-sdk/anthropic": "^3.0.71",
"@ai-sdk/google": "^3.0.64",
"@ai-sdk/openai": "^3.0.53",
"@ai-sdk/openai-compatible": "^2.0.41",
"@anthropic-ai/sdk": "^0.30.0",
"@aws-sdk/client-s3": "^3.1028.0",
"@dqbd/tiktoken": "^1.0.22",
"@electric-sql/pglite": "0.4.3",
"@jsquash/avif": "^2.1.1",
"@jsquash/png": "^3.1.1",
"@modelcontextprotocol/sdk": "1.29.0",
"ai": "^6.0.168",
"chokidar": "^4.0.3",
"cookie-parser": "^1.4.7",
"cors": "^2.8.5",
"eventsource-parser": "^3.0.8",
"exifr": "^7.1.3",
"express": "^5.1.0",
"express-rate-limit": "^7.5.0",
"gray-matter": "^4.0.3",
"heic-decode": "^2.1.0",
"js-yaml": "^3.14.2",
"marked": "^18.0.0",
"openai": "^4.0.0",
"pgvector": "^0.2.0",
"postgres": "^3.4.0",
"tree-sitter-wasms": "0.1.13",
"web-tree-sitter": "0.22.6",
"zod": "^4.3.6"
},
"devDependencies": {
"@types/bun": "latest",
"@types/cookie-parser": "^1.4.7",
"@types/cors": "^2.8.19",
"@types/express": "^5.0.6",
"@types/js-yaml": "^3.12.10",
"bun-types": "^1.3.13",
"fast-check": "^4.8.0",
"typescript": "^5.6.0"
},
"trustedDependencies": [
"@electric-sql/pglite"
],
"engines": {
"bun": ">=1.3.10"
},
"license": "MIT"
}
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