admin/gbrain
1
0
Fork 0
mirror of https://github.com/garrytan/gbrain.git synced 2026-07-27 22:15:33 +00:00
Code Issues Packages Projects Releases Wiki Activity
Files
d036a97f9ca6dc27868ac9bd471db213a287de68
gbrain/package.json
T
Garry TanGitHubgarrytan-agentsClaude Opus 4.7
 d036a97f9c v0.41.10.1 fix-wave: dream.* config + batch retry + extract_atoms idempotency + ze-switch env-gate (#1445) 
* fix-wave: dream.* DB merge + batch retry + extract_atoms idempotency + ze-switch env-gate + doctor check

Closes PRs #1414, #1416, #1421 (rebuilt from designs by @garrytan-agents
with structural improvements from /plan-eng-review + codex outside-voice).

Three production reliability fixes in one wave:

1. dream.* DB-config merge (closes PR #1416 silent-config gap)
   - loadConfigWithEngine() sparse-merge extends with 7 dream.* keys
   - File > DB > defaults precedence (no GBRAIN_DREAM_* env vars)
   - extract-atoms switches to loadConfigWithEngine() so DB-plane keys reach it

2. Batch retry on transient connection drops (closes PR #1416 ~30%-loss bug)
   - withRetry() pure primitive exported from src/commands/extract.ts
   - 6 flush() sites snapshot-before-clear with onRetry callback
   - Reuses isRetryableConnError from src/core/retry-matcher.ts
   - retry-matcher extended with GBrainError{problem:'No database connection'}

3. extract_atoms source-hash idempotency + page-based discovery (closes #1414)
   - One raw SQL with NOT EXISTS subquery replaces 6 listPages + N atom checks
   - sourceId threaded through every putPage call (codex caught real bug)
   - NULL content_hash filter + dream_generated exclusion + transcript-side idempotency
   - cycle.ts passes union of syncPagesAffected + synthesizeWrittenSlugs

4. ze-switch pre-apply + pre-resume env-override gate (closes PR #1421)
   - Gate fires FIRST in apply AND resume; zero setConfig calls on refusal
   - ASCII warning box (no Unicode per repo D10)
   - --ignore-env-override escape hatch for power users
   - ApplyResult extended with refused variant

5. doctor embedding_env_override check (defense-in-depth for #1421)
   - Cross-surface parity: buildChecks() + doctorReportRemote()
   - Uses Check.details (not Check.issues per codex schema review)

Co-Authored-By: garrytan-agents <garrytan-agents@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore: bump version and changelog (v0.41.10.0)

Adds 61 new tests across 5 new files pinning the fix-wave contracts:
- test/extract-batch-retry.test.ts (16 cases) — withRetry primitive + snapshot contract
- test/extract-atoms-page-discovery.test.ts (17 cases) — discovery SQL + dual-source idempotency
- test/ze-switch-env-override.test.ts (17 cases) — env-gate apply + resume + ZERO-setConfig assertion
- test/doctor-embedding-env-override.test.ts (7 cases) — cross-surface parity
- test/e2e/extract-atoms-discovery-sql.test.ts (4 cases) — real-Postgres parity for raw SQL

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(test): pin gateway to 1536-dim in 2 PGLite tests that hardcode 1536-vector inserts

CI shards 1 + 4 failed persistently (not flake — confirmed via retry) after the
v0.41.6.0 merge with this error:

  error: expected 1280 dimensions, not 1536
  file: "vector.c", routine: "CheckExpectedDim"

Two test files insert 1536-dim Float32Array vectors into `content_chunks.embedding`
/ `facts.embedding`, but v0.41.5.0 flipped `DEFAULT_EMBEDDING_DIMENSIONS` from
1536 to 1280 (ZE Matryoshka default). On a fresh CI bun process where no prior
test pre-configured the gateway, `initSchema()` sizes the vector column at
vector(1280) and the inserts throw.

Locally this is hidden when an earlier test file in the shard happens to have
called `configureGateway({embedding_dimensions: 1536})` — that state leaks
forward through bun's shared process. The v0.41.6.0 LPT shard re-balancing
reordered files so these two ran cold, surfacing the latent bug.

Fix follows the canonical hermetic pattern from
test/consolidate-valid-until.test.ts:23-34: pin the gateway to 1536d in
beforeAll, reset in afterAll. Test is now isolated from shard ordering.

  test/search-types-filter.test.ts     — shard 1 fail
  test/operations-find-trajectory.test.ts — shard 4 (6 fails)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore: empty commit to trigger CI

* chore: trigger CI again

* chore: renumber v0.41.10.0 -> v0.41.10.1

Per request — version slot moved to .1 micro tier to leave .0 available
for unrelated wave landing on master.

---------

Co-authored-by: garrytan-agents <garrytan-agents@users.noreply.github.com>
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-25 15:10:23 -07:00

138 lines
6.6 KiB
JSON
Raw Blame History

{
"name": "gbrain",
"version": "0.41.10.1",
"description": "Postgres-native personal knowledge brain with hybrid RAG search",
"type": "module",
"main": "src/core/index.ts",
"bin": {
"gbrain": "src/cli.ts"
},
"exports": {
".": "./src/core/index.ts",
"./engine": "./src/core/engine.ts",
"./types": "./src/core/types.ts",
"./operations": "./src/core/operations.ts",
"./minions": "./src/core/minions/index.ts",
"./engine-factory": "./src/core/engine-factory.ts",
"./pglite-engine": "./src/core/pglite-engine.ts",
"./link-extraction": "./src/core/link-extraction.ts",
"./import-file": "./src/core/import-file.ts",
"./transcription": "./src/core/transcription.ts",
"./embedding": "./src/core/embedding.ts",
"./config": "./src/core/config.ts",
"./markdown": "./src/core/markdown.ts",
"./backoff": "./src/core/backoff.ts",
"./search/hybrid": "./src/core/search/hybrid.ts",
"./search/expansion": "./src/core/search/expansion.ts",
"./ai/gateway": "./src/core/ai/gateway.ts",
"./extract": "./src/commands/extract.ts",
"./ingestion": "./src/core/ingestion/index.ts",
"./ingestion/test-harness": "./src/core/ingestion/test-harness.ts"
},
"scripts": {
"dev": "bun run src/cli.ts",
"build": "bun build --compile --outfile bin/gbrain src/cli.ts",
"build:all": "bun build --compile --target=bun-darwin-arm64 --outfile bin/gbrain-darwin-arm64 src/cli.ts && bun build --compile --target=bun-linux-x64 --outfile bin/gbrain-linux-x64 src/cli.ts",
"build:admin": "cd admin && bun run build && cd .. && bun run scripts/build-admin-embedded.ts",
"build:admin-embedded": "bun run scripts/build-admin-embedded.ts",
"build:schema": "bash scripts/build-schema.sh",
"build:llms": "bun run scripts/build-llms.ts",
"build:pglite-snapshot": "bun run scripts/build-pglite-snapshot.ts",
"test": "bash scripts/run-unit-parallel.sh",
"test:full": "bun run verify && bash scripts/run-unit-parallel.sh && bun run test:slow && ([ -n \"$DATABASE_URL\" ] && bash scripts/run-e2e.sh || echo '[test:full] skipped E2E (no DATABASE_URL); run docker-compose -f docker-compose.ci.yml up + bun run test:e2e to include' 1>&2)",
"verify": "bash scripts/run-verify-parallel.sh",
"check:source-config-leak": "scripts/check-source-config-leak.sh",
"check:no-pii-agent-voice": "scripts/check-no-pii-in-agent-voice.sh",
"check:synthetic-corpus-privacy": "scripts/check-synthetic-corpus-privacy.sh",
"check:system-of-record": "scripts/check-system-of-record.sh",
"check:admin-scope-drift": "scripts/check-admin-scope-drift.sh",
"check:cli-exec": "scripts/check-cli-executable.sh",
"check:all": "scripts/check-privacy.sh && scripts/check-proposal-pii.sh && scripts/check-test-real-names.sh && scripts/check-jsonb-pattern.sh && scripts/check-source-id-projection.sh && scripts/check-source-config-leak.sh && scripts/check-progress-to-stdout.sh && scripts/check-no-legacy-getconnection.sh && scripts/check-test-isolation.sh && scripts/check-trailing-newline.sh && scripts/check-wasm-embedded.sh && scripts/check-exports-count.sh && scripts/check-admin-build.sh && scripts/check-admin-scope-drift.sh && scripts/check-cli-executable.sh && scripts/check-skill-brain-first.sh && scripts/check-operations-filter-bypass.sh && scripts/check-gateway-routed-no-direct-anthropic.sh",
"check:gateway-routed": "scripts/check-gateway-routed-no-direct-anthropic.sh",
"check:skill-brain-first": "scripts/check-skill-brain-first.sh",
"check:wasm": "scripts/check-wasm-embedded.sh",
"check:newlines": "scripts/check-trailing-newline.sh",
"test:e2e": "bash scripts/run-e2e.sh",
"test:slow": "bash scripts/run-slow-tests.sh",
"test:heavy": "bash scripts/run-heavy.sh",
"test:profile": "bash scripts/profile-tests.sh",
"test:serial": "bash scripts/run-serial-tests.sh",
"ci:local": "bash scripts/ci-local.sh",
"ci:local:diff": "bash scripts/ci-local.sh --diff",
"ci:select-e2e": "bun run scripts/select-e2e.ts",
"typecheck": "tsc --noEmit",
"check:jsonb": "scripts/check-jsonb-pattern.sh",
"check:source-id-projection": "scripts/check-source-id-projection.sh",
"check:privacy": "scripts/check-privacy.sh",
"check:proposal-pii": "scripts/check-proposal-pii.sh",
"check:eval-glossary": "scripts/check-eval-glossary-fresh.sh",
"check:test-names": "scripts/check-test-real-names.sh",
"check:progress": "scripts/check-progress-to-stdout.sh",
"check:exports-count": "scripts/check-exports-count.sh",
"check:admin-build": "scripts/check-admin-build.sh",
"check:admin-embedded": "scripts/check-admin-embedded.sh",
"check:test-isolation": "scripts/check-test-isolation.sh",
"check:fuzz-purity": "scripts/check-fuzz-purity.sh",
"check:operations-filter-bypass": "scripts/check-operations-filter-bypass.sh",
"postinstall": "command -v gbrain >/dev/null 2>&1 && gbrain apply-migrations --yes --non-interactive || echo '[gbrain] postinstall skipped. If installed via bun install -g github:...: run `gbrain doctor` and `gbrain apply-migrations --yes` manually. See https://github.com/garrytan/gbrain/issues/218' 1>&2",
"prepublish:clawhub": "bun run build:all",
"publish:clawhub": "clawhub package publish . --family bundle-plugin"
},
"openclaw": {
"compat": {
"pluginApi": ">=2026.4.0"
},
"extensions": [
"./src/openclaw-context-engine.ts"
]
},
"dependencies": {
"@ai-sdk/anthropic": "^3.0.71",
"@ai-sdk/google": "^3.0.64",
"@ai-sdk/openai": "^3.0.53",
"@ai-sdk/openai-compatible": "^2.0.41",
"@anthropic-ai/sdk": "^0.30.0",
"@aws-sdk/client-s3": "^3.1028.0",
"@dqbd/tiktoken": "^1.0.22",
"@electric-sql/pglite": "0.4.3",
"@jsquash/avif": "^2.1.1",
"@jsquash/png": "^3.1.1",
"@modelcontextprotocol/sdk": "1.29.0",
"ai": "^6.0.168",
"chokidar": "^4.0.3",
"cookie-parser": "^1.4.7",
"cors": "^2.8.5",
"eventsource-parser": "^3.0.8",
"exifr": "^7.1.3",
"express": "^5.1.0",
"express-rate-limit": "^7.5.0",
"gray-matter": "^4.0.3",
"heic-decode": "^2.1.0",
"js-yaml": "^3.14.2",
"marked": "^18.0.0",
"openai": "^4.0.0",
"pgvector": "^0.2.0",
"postgres": "^3.4.0",
"tree-sitter-wasms": "0.1.13",
"web-tree-sitter": "0.22.6",
"zod": "^4.3.6"
},
"devDependencies": {
"@types/bun": "latest",
"@types/cookie-parser": "^1.4.7",
"@types/cors": "^2.8.19",
"@types/express": "^5.0.6",
"@types/js-yaml": "^3.12.10",
"bun-types": "^1.3.13",
"fast-check": "^4.8.0",
"typescript": "^5.6.0"
},
"trustedDependencies": [
"@electric-sql/pglite"
],
"engines": {
"bun": ">=1.3.10"
},
"license": "MIT"
}
Reference in New Issue View Git Blame Copy Permalink