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f09f9177a9 |
v0.42.10.0 feat(extract): opt-in global-basename wikilink resolution (closes #972) (#1388)
* v0.40.8.2 fix(extract): opt-in global-basename wikilink resolution (#972) Bare wikilinks like [[struktura]] that point at pages in another folder were silently dropped from the graph. The issue reporter saw 71 wikilinks in Obsidian render to 12 in gbrain (~83% lost). Symptoms downstream: `gbrain graph` returns thin neighborhoods, `gbrain backlinks` undercounts. This release adds an opt-in mode that resolves bare wikilinks by basename match, covers all three resolver surfaces (FS-source extract, DB-source extract, put_page auto-link), and emits one edge per match — no silent winner on ambiguity. `gbrain doctor` surfaces a paste-ready enable hint when ≥5 bare wikilinks would resolve under the new mode. Enable with: gbrain config set link_resolution.global_basename true gbrain extract links Default stays off. Existing brains see zero behavior change on upgrade. Closes #972. Adapts PR #1233 from @rayers (regex shape + slug-tail index) into a multi-match, opt-in form with FS-source coverage that the original PR explicitly skipped. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: document opt-in global-basename wikilink resolution (#972) The #972 feature shipped with no user-facing docs — only CHANGELOG + CLAUDE.md. Anyone migrating an Obsidian/Notion vault with bare [[name]] wikilinks couldn't discover the link_resolution.global_basename flag unless gbrain doctor happened to surface its hint. - README "Self-wiring knowledge graph": one sentence on the opt-in mode for Obsidian-style cross-folder bare wikilinks + the doctor pre-check, linking to the install step. - INSTALL_FOR_AGENTS Step 4.5 (Wire the Knowledge Graph): a dedicated agent- facing subsection — when bare [[name]] links need it, the enable command, re-running extract, the doctor opportunity hint, and the multi-match behavior. - Regenerated llms-full.txt. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(#972): resolve aliased wikilinks by target slug, not display text Codex outside-voice [P1]: `[[struktura|the project]]` resolved the basename "the project" (the alias) instead of `struktura` (the target), because extractPageLinks called resolveBasenameMatches(ref.name) and the doctor check keyed basenameIndex.get(e.name). ref.name is the display alias (match[2]); ref.slug is the wikilink target (match[1]). - extractPageLinks resolves ref.slug; context excerpt locates ref.slug. - doctor link_resolution_opportunity keys e.slug so its estimate matches what extraction actually resolves. - Test: aliased wikilink calls resolveBasenameMatches with the target, never the display text. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(#972): reconcile wikilink-resolved edges in put_page auto-link Codex outside-voice [P1]: put_page's reconcilableOut filter excluded link_source='wikilink-resolved', so a basename edge written by auto-link survived after the bare wikilink was deleted from the page OR the link_resolution.global_basename flag was turned off (the stale-removal loop only iterates reconcilableOut). Add 'wikilink-resolved' to the reconcilable set; manual edges still untouched. Test: write page with [[struktura]] (flag on) → edge lands; re-put without the wikilink → edge reconciled away. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(#972): source-scope basename resolution (no cross-source edges) Codex outside-voice [P1]: makeResolver.resolveBasenameMatches called engine.getAllSlugs() unscoped, so a bare [[name]] could resolve to a same-tail page in a DIFFERENT source and create a cross-source edge. The engine exposes getAllSlugs({sourceId}) precisely to prevent this. #972 is "global basename across folders," not "cross-source federation" — the canonical gbrain multi-source bug class. - makeResolver gains opts.sourceId; ensureBasenameIndex passes it to getAllSlugs (unscoped only when sourceId omitted — back-compat). - runAutoLink (put_page) passes opts.sourceId; extractLinksFromDB passes sourceIdFilter. FS extract is already single-source (walks one dir). - Tests: scoped index returns only the source's slugs (no cross-source); unscoped call stays brain-wide. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(#972): FS-source basename edges carry link_source='wikilink-resolved' The FS extract path is the issue's default repro (gbrain extract links with no --source db). ExtractedLink had no link_source field, so FS basename edges landed with the engine default ('markdown') instead of the 'wikilink-resolved' provenance the DB / put_page paths set and the docs promise. The e2e FS test only asserted link_type, so it was blind to this. - ExtractedLink gains link_source?; extractLinksFromFile sets it to 'wikilink-resolved' on basename edges (undefined for ordinary markdown). - Carries through the addLinksBatch snapshots automatically (LinkBatchInput already has link_source); single-row addLink fallback now passes it too. - e2e FS repro asserts link_source === 'wikilink-resolved'. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * refactor(#972): one shared basename matcher across resolver/FS/doctor Codex outside-voice [P2] DRY: three surfaces each hand-rolled a basename matcher with divergent key sets — the doctor omitted the slugified key, so its link_resolution_opportunity estimate undercounted what extraction resolves, and the resolver returned matches in unsorted getAllSlugs bucket order. New shared exports in link-extraction.ts: buildBasenameIndex(slugs) + queryBasenameIndex(index, name) (keys raw/lower/slugified tail; stable sort shorter-first then lexical) + normalizeBasename. - makeResolver.resolveBasenameMatches → queryBasenameIndex (now stable-sorted). - extract.ts resolveBasenameMatchesFromSlugs → delegates to the shared pair. - doctor link_resolution_opportunity → shared builder/query (slugified key added; estimate now matches extraction). - Test: doctor counts a slugified-only match ([[Fast Weigh]] → companies/fast-weigh). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(#972): P2 cluster — masking, code-fence, self-link, dedup decision Codex outside-voice P2 findings: - P2a markdown-label masking: a wikilink inside a markdown-link label ([see [[acme]]](companies/acme.md)) spawned a stray generic basename ref. Pass-1 can't match the nested brackets, so a new MARKDOWN_LABEL_WIKILINK_RE masks those spans out of pass 2c. Inner [[acme]] is now inert. - P2b FS code-fence: the FS path (extractMarkdownLinks on raw content) didn't strip code blocks like the DB path. extractLinksFromFile now scans stripCodeBlocks(content) so [[name]] inside a fence creates no FS edge. - P2c self-link guard: a basename [[own-tail]] on its own page resolved back to itself. Dropped in both extractPageLinks and the FS path. - P2d dedup: documented the decision to KEEP qualified + bare edges to the same target as separate rows (distinct provenance/audit trail). - P2e: skipFrontmatter unresolved-contract tests added. Tests: P2a inert-label, P2c self-link drop, P2b code-fence, P2e unresolved. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * perf(#972): bound the doctor link_resolution_opportunity scan The check did listAllPageRefs() + a getPage() per page under a 60s budget. On a large brain (the eng-review concern) it hit the budget every non-fast doctor run and returned a perpetual partial, adding ~60s. Now batch-loads the 1000 most-recent pages in ONE query (ORDER BY id DESC LIMIT SAMPLE_LIMIT) and scans in memory, with the 60s cap kept as a backstop. Mirrors the v0.40.9 sampling convention. The estimate message names the bound when the brain exceeds the sample ("scanned the 1000 most-recent of N pages"). Test: source-grep pins the bounded query + the absence of the per-page getPage walk. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs(#972): reconcile stale version/migration references to v112 / 0.42.6.0 Merge churn left intermediate refs: schema.sql + schema-embedded.ts said "migration v93", CLAUDE.md said "v0.41.32.0 / Migration v109", CHANGELOG said "Migration v93". Reconciled all to migration v112 / shipping 0.42.6.0. The CLAUDE.md annotation is also refreshed to describe the final behavior (shared matcher, source-scoping, alias-by-target, stale-edge reconciliation, bounded doctor scan) and credit @rayers + @ukd1. Regenerated schema-embedded + llms. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(#972): register doctor check category + bump llms budget to 800KB Two full-suite gate failures from the re-sync: - doctor-categories drift guard: the new `link_resolution_opportunity` check wasn't in any category set. Added to BRAIN_CHECK_NAMES (alongside graph_coverage / orphan_ratio — it's a graph-quality signal). - build-llms size budget: the #972 Key Files annotation (landing with master's #1696/#1699 waves) pushed llms-full.txt past 750KB. Bumped FULL_SIZE_BUDGET 750KB→800KB, the established "budget tracks CLAUDE.md's legitimate per-feature growth" pattern (600→700→750→800 across releases). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> Co-authored-by: Garry Tan <garrytan@gmail.com> |
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7b0d99adb0 |
v0.42.2.0 feat: gbrain connect — one-command Claude Code onboarding from a bearer token (#1683)
* fix: gbrain auth create dropped the name on the bare (no-flag) form Extract parseAuthCreateArgs; only exclude the --takes-holders value from the positional search when the flag is present (rest[takesIdx+1] resolved to rest[0] when takesIdx === -1, silently dropping the name). Add regression test. * feat: gbrain connect — one-command Claude Code onboarding from a bearer token New connect command prints a paste-ready claude-mcp-add block (or --install wires it + smoke-tests the token via a raw-bearer get_brain_identity probe). Direct HTTP MCP, literal-token default, URL normalization, token header-injection guard, --json redaction, execFileSync (no shell). Wired into CLI_ONLY + CLI_ONLY_SELF_HELP + handleCliOnly. 58 unit + 3 PGLite-E2E cases; e2e-test-map updated. * docs: lead CLAUDE_CODE.md with gbrain connect (remote fast path) + README one-liner Regenerate llms-full.txt for the README change. * refactor: pre-landing review fixes for gbrain connect - DRY: single DEFAULT_PROBE_TIMEOUT_MS + shared isAuthErrorMessage predicate - reuse promptLine (shared stdin lifecycle) for the --install confirm - harden redactToken with a Bearer <value> scrub (defense in depth) - +8 tests: orchestrator guard paths, deterministic timeout, invalid --timeout-ms, Bearer-redaction * fix: adversarial-review hardening for gbrain connect - probe: Promise.race the call against a real timer so a stalled connect()/SSE handshake (signal alone doesn't cover it) can't hang --install indefinitely - probe: close transport even if client.connect() throws - parseArgs: reject a missing/flag-shaped value (e.g. --token --install) - block link-local / cloud-metadata hosts (169.254/fe80:/fd00:ec2::254) — keeps localhost + RFC1918 LAN brains working - non-interactive --install now requires --yes - clearer message when --force removed then add failed +8 tests covering each * fix: codex-review P2s for gbrain connect - POSIX single-quote the rendered claude-mcp-add command so a token with shell metacharacters ($(), backticks) can't trigger command substitution on paste - detect IPv4-mapped IPv6 metadata addresses (::ffff:169.254.x.x / ::ffff:a9fe:*) so they don't bypass the link-local guard +3 tests * chore: bump version and changelog (v0.42.2.0) Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: document gbrain connect + connect-probe in CLAUDE.md Key files (v0.42.2.0) Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * feat: gbrain connect — add codex and perplexity agents --agent codex emits 'codex mcp add ... --bearer-token-env-var GBRAIN_REMOTE_TOKEN' (token read from the env var at runtime, never in Codex config; --install runs it). --agent perplexity prints the URL + token for the Settings → Connectors GUI (no --install). Generalized the command file: AGENT_SPECS table, buildCodexMcpAddArgv, cmdString(binary,argv), binary-generic ConnectDeps (hasBinary/runBinary/env), agent-aware buildConnectBlock/buildJson. +25 tests. * docs: codex + perplexity connect paths (new CODEX.md, README, CHANGELOG, CLAUDE.md) Regenerate llms-full.txt for the CLAUDE.md/README edits. * test: real-CLI E2E for connect — drive actual claude + codex against a live server Adds claude-code + codex cases to connect-bearer.test.ts that run the real 'claude mcp add' / 'codex mcp add' through 'gbrain connect --install' against a live 'gbrain serve --http' (sandboxed HOME/CODEX_HOME), then assert via 'claude mcp get' / 'codex mcp get' that the server registered (and codex's token stays out of config). Skips when the binary is absent. Perplexity is GUI-only so it's print-asserted. Regen llms for the CLAUDE.md note. * docs: perplexity OAuth + serve --bind/--public-url footgun (per Perplexity feedback) PERPLEXITY.md now documents the host-side HTTP setup (gbrain serve --http --bind 0.0.0.0 --public-url, the v0.34 ECONNREFUSED footgun) and the OAuth 2.1 client_credentials path (gbrain auth register-client) alongside the legacy bearer token. The 'connect --agent perplexity' output points at the same bind/public-url requirement + PERPLEXITY.md. * feat: gbrain connect --oauth — client-credentials path for perplexity/generic OAuth is the correct path for a third-party cloud connector (Perplexity): instead of a long-lived full-access bearer token, the connector gets Issuer URL + Client ID + Client Secret and mints short-lived scoped tokens. --oauth --register mints a least-privilege client on the host (shells gbrain auth register-client); --oauth --client-id/--client-secret uses an existing one. Rejected for claude-code/codex (bearer) and with --install. Issuer derived from the mcp-url. New E2E proves the full chain: register → connect --oauth → OAuth discovery → /token client_credentials mint → get_brain_identity tool call against a live server. Docs: PERPLEXITY.md leads with OAuth; README + CLAUDE.md updated; +18 unit cases. * docs: add gbrain connect to INSTALL.md MCP section + link CODEX.md The remote-client onboarding command was documented in README/CLAUDE_CODE/CODEX/ PERPLEXITY but missing from INSTALL.md §3 (the natural 'how do I connect a client' home). Add the one-command connect how-to (claude-code/codex/perplexity) and the missing docs/mcp/CODEX.md link. * fix: connect LEARN_INSTRUCTION names put_page, not CLI-only capture The self-orientation block told a connected agent that `capture` is an available MCP tool. It isn't — `capture` is a CLI-only convenience command; the MCP write tool is `put_page`. An agent that followed the instruction hit "unknown tool". Drop capture; put_page was already in the list. Adds a regression block to connect.test.ts. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * feat: serve --http surfaces skill-publishing status (banner + nudge) When mcp.publish_skills is OFF, connected agents can search/write but can't call list_skills/get_skill, so the host's skill catalog is invisible to them. The startup banner now shows a Skills: line, and a stderr nudge fires when off with the paste-ready fix. Pure skillPublishStatus() helper, unit-tested. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * test: prove the local stdio MCP funnel end-to-end Spawns real `gbrain serve` (stdio) against a freshly init --pglite brain and drives the official MCP SDK client through initialize -> tools/list -> tools/call (get_brain_identity + search). Pins the advertised core-tool set against what the server actually exposes (asserts capture is NOT advertised). This funnel had zero e2e coverage before. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * test: make batch-retry-audit ENOENT case hermetic The 'no-op when audit dir does not exist' case called pruneOldBatchRetryAuditFiles(30) without a GBRAIN_AUDIT_DIR override, so it read the real ~/.gbrain/audit and flaked (kept:1) on any dev machine with a batch-retry-*.jsonl on disk. Point it at a guaranteed-missing temp subdir, matching this file's own hermetic-header contract. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: two-funnel coding-agent onboarding (Claude Code / Codex) New tutorial docs/tutorials/connect-coding-agent.md: Path A (connect to an existing brain) + Path B (start from nothing, local stdio), the brain-first protocol to paste into CLAUDE.md/AGENTS.md, and the four translatable habits. README gains a 'Quick start: Claude Code or Codex' fork separating lightweight retrieval from the full autonomous install. INSTALL.md shows the one-command wire-up at the standalone CLI section. mcp/CLAUDE_CODE + CODEX cross-link the tutorial + note publish_skills + capture-is-CLI-only. Tutorial promoted to Shipped in the tutorials index. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * chore: changelog + regenerated llms (v0.42.2.0) Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: CLAUDE.md Key Files annotation for two-funnel onboarding wave Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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eefe8b5741 |
v0.42.1.0 feat: gbrain skillopt — self-evolving skills (closes #1481) (#1563)
* feat(skillopt): foundation modules — types, lr-schedule, benchmark, score, audit, lock
* feat(skillopt): edit primitives — apply-edits (D5+D9), rejected-buffer LRU, version-store (D8 history-intent-first)
* feat(skillopt): rollout (D2 gateway.toolLoop + D13 read-only allowlist), reflect (D7 two calls), validate-gate (D12 median+epsilon, D4 parallel), preflight (D3), bundled-skill-gate (D16)
* feat(skillopt): orchestrator (D6 slow-update, D10 ASCII diagrams, D11 caching), checkpoint, bootstrap (D15 sentinel), CLI dispatch + help
* feat(skillopt): cycle phase (F1 dream-loop wiring), PROTECTED_JOB_NAMES + MCP op (F6 admin scope + allowlist) + Minion handler (F7 --background)
* feat(skillopt): full cathedral — --all batch (F4), --target-models fleet (F5), write-capture (F10), held-out scaffold (F11), adversarial suite 41 cases (F2), E2E PGLite (F3), meta-skill bundle (T7), reflect+judge evals (F8+F9), docs (T10)
* chore: bump version to v0.42.0.0 (MINOR — significant new feature)
* fix(skillopt): wire trajectories from forward gate to reflect + fix parseEditsResponse parser misuse
Two related v0.42.0.0 bugs that conspired to make `runSkillOpt` structurally
unable to accept any candidate edit. Either alone would have killed self-evolution;
together they made the loop a no-op for every input.
**Bug 1 (orchestrator gap):** `runOptimizationLoop` in orchestrator.ts called
`runReflect({successes: [], failures: []})` with hardcoded empty arrays. The
forward gate's `scoredRollouts` were computed then voided. `runReflect`
short-circuits both modes when their batches are empty, so the optimizer was
never asked to propose an edit. Every step hit the no_edits_applied branch.
Fix: add `scoredRollouts: ScoredRollout[]` to `GateResult` and
`runsPerTask?: number` to `ValidateGateOpts`. Forward pass uses
`runsPerTask: 1`; orchestrator partitions returned rollouts by `score >= 0.5`
and threads real successes + failures into `runReflect`.
**Bug 2 (parser misuse):** `parseEditsResponse` in reflect.ts routed every
optimizer response through `parseJudgeJson` first. `parseJudgeJson` looks for
a `score` key (it's a judge-output parser, not an edits parser) and returns
null for any JSON without one — including the well-formed `{"edits": [...]}`
the optimizer is contractually required to emit. The function then early-
returned `[]` and the actual `tryExtractEdits` path on the next line was
unreachable dead code.
Fix: drop the wrong-typed guard. `parseEditsResponse` now calls
`tryExtractEdits` directly. Export it so `reflect.test.ts` can pin the
contract independently of the chat transport.
**Why this slipped through 152 prior skillopt tests:** zero unit coverage
of `parseEditsResponse` or `runReflect`. The existing E2E `all-reject` case
asserted no_improvement (which was true for the wrong reason — empty edits,
not gate rejection). Both bugs were structurally invisible to the existing
test surface.
**New coverage:**
- `test/skillopt/reflect.test.ts` (15 cases):
- 8 `parseEditsResponse` cases including the IRON-RULE regression pin
for the v0.42.0.1 fix (`{"edits": [...]}` JSON must survive the parser).
- 7 `runReflect` D7 contract cases: both modes fire, empty-batch skips,
additive token usage, one-mode-throws-other-still-works, rejected-buffer
flows into anti-bias prompt.
- Documents the trailing-comma limitation as an explicit out-of-scope pin
(so a future tightening of `tryExtractEdits` lights this test up
intentionally).
- `test/e2e/skillopt-loop.serial.test.ts` (7 cases):
- HAPPY PATH: stubbed `gateway.chat` acts as both target agent (emits
sections based on skill content) and optimizer (proposes a real
add-Citations edit). Drives `runSkillOpt` end-to-end against PGLite.
Asserts outcome=accepted, SKILL.md mutated with new section,
frontmatter preserved (D5), history has one committed row,
best.md mirrors disk, delta > epsilon, receipt fields populated.
- 5 broken cases (each isolates a distinct orchestrator-visible failure):
1. Below-baseline regression: optimizer proposes a destructive edit;
gate rejects with reason=below_baseline; SKILL.md unchanged;
rejected-buffer captures the bad edit for anti-bias context.
2. Malformed reflect JSON: orchestrator degrades gracefully to
no_improvement without crashing.
3. Anchor-not-found: applyEditBatch rejects all; sel gate skipped;
rejected-buffer captures with reason=apply_failed.
4. Budget exhausted mid-step: outcome=aborted, no pending rows survive.
5. Converged-skill re-run: starting from already-perfect skill →
no_improvement (no thrash on a well-tuned starting point).
- IDEMPOTENT RE-RUN: drive runSkillOpt twice in sequence. Run 1 accepts.
Run 2 sees improved baseline, no failures, returns no_improvement.
SKILL.md byte-identical to post-run-1; history still has exactly 1
committed row. Proves stability at the fixed point.
All hermetic (no DATABASE_URL, no API keys). PGLite in-memory engine,
tempdir SKILL.md + benchmark, stubbed gateway.chat via
`__setChatTransportForTests`. `.serial.test.ts` because the stub installs
module state and the loop walks shared disk state across epochs.
Test counts after fix: 174 skillopt-surface tests pass (149 pre-existing
unit + 15 new reflect unit + 3 existing E2E + 7 new E2E). Typecheck clean.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix(cycle): align ALL_PHASES skillopt position with actual dispatch order
v0.42.0.0 added skillopt to ALL_PHASES right after `patterns` (line 127), but
the dispatch block in runCycle (line ~1912) actually runs skillopt between
`conversation_facts_backfill` and `embed`. The two were inconsistent, and the
serial test `report.phases.map(p => p.phase)).toEqual(ALL_PHASES)` was failing
on master because of it.
A second pre-existing failure: the two phase-count assertions in
`test/core/cycle.serial.test.ts` still said `toBe(20)` even though
ALL_PHASES grew to 21 when skillopt was added. The author bumped the array
but forgot the test.
Two fixes, one commit:
1. Move `'skillopt'` in ALL_PHASES from after `patterns` to between
`conversation_facts_backfill` and `embed`, matching where runCycle
actually dispatches it. Runtime behavior is unchanged — only the
declaration order moves. Updated the surrounding comment to call out
the position invariant and reference the test that pins it.
2. Update both `toBe(20)` assertions in cycle.serial.test.ts to `toBe(21)`
with a v0.42.0.0 history line in the running comments.
Why declaration follows runtime (not the other way around): the comment
intent ("Runs AFTER patterns — graph-fresh") is still satisfied because
"after the entire main graph-mutating cluster" is strictly fresher than
"right after patterns". No design intent is lost.
Test result: cycle.serial.test.ts is now 28/28 (was 27/28 on master + my
prior commit). Skillopt suite still 174/174.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix(ci): bump PHASE_SCOPE assertion to 21 + fix skill-optimizer Anti-Patterns case
Two CI failures pre-existing on this branch since the v0.42.0.0 skillopt
cathedral landed; master is green because skillopt didn't exist there yet.
1. test/phase-scope-coverage.test.ts asserted ALL_PHASES.length === 20.
skillopt is the 21st phase. Bumped to 21 with v0.42.0.0 history line
in the comment chain. Sibling fix to the cycle.serial.test.ts bump
in commit
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6f26d5e4df |
v0.41.37.0 fix: critical fix wave — reindex tag wipe, grandfather hang, Windows migration spawn, sync ReDoS (#1621 #1581 #1605 #1569) (#1665)
* fix(reindex): add-only tag reconciliation + DB-only re-chunk preserves frontmatter (#1621) reindex --markdown and re-import no longer wipe DB-side enrichment tags. Tag reconciliation is now ADD-ONLY (import-file.ts): re-import adds current frontmatter tags and never deletes, so auto/dream/signal-detector tags survive. The reindex DB-only fallback reconstructs full markdown via serializeMarkdown so re-chunking a page with no on-disk source preserves frontmatter/title/timeline. * fix(migrations): v0.13.1 grandfather chunked, source-safe, soft-delete-filtered (#1581) phaseCGrandfather rewritten from a per-page getPage+putPage loop (which hung 70+ min on an 82K-page PGLite brain) to a chunked bulk SQL pass keyed on pages.id (NOT slug — slug isn't globally unique), filtering deleted_at IS NULL, with a batched rollback log carrying source identity. * fix(migrations): run schema phases in-process to fix Windows getaddrinfo ENOTFOUND (#1605) The 9 'gbrain init --migrate-only' execSync spawns died on Windows+bun+Supabase (child DNS resolution). runMigrateOnlyCore (extracted from initMigrateOnly) runs the schema bring-up in-process for all engines, unblocking schema_version advancement. Includes async-call-site audit, a wall-clock guard, and a runGbrainSubprocess stderr-capture wrapper for the remaining backfill spawns. * fix(sync): ReDoS hardening + diagnostics for schema-pack regexes (#1569) Input-length cap in runRegexBounded + route the unbounded link-inference path through it (closes the only no-timeout ReDoS hole); star-height lint rule warns on nested-quantifier patterns; --no-schema-pack sync escape hatch; GBRAIN_SYNC_TRACE per-file begin heartbeat; PGLite serve/sync concurrency doc. Defensive hardening + diagnostics — the deterministic ~3100-file wedge root cause remains open (no repro). * docs(todos): file v0.41.37.0 fix-wave follow-ups (#1621/#1605/#1569) * chore: bump version and changelog (v0.41.37.0) Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: sync README + CLAUDE.md for v0.41.37.0 critical fix wave Add reindex add-only tag reconciliation (#1621), v0.13.1 grandfather + Windows in-process migration (#1581/#1605), and schema-pack ReDoS hardening + sync --no-schema-pack / GBRAIN_SYNC_TRACE triage (#1569) to CLAUDE.md key-files annotations and README Troubleshooting. Regenerated llms-full.txt. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(ci): bump llms-full.txt budget 700KB→750KB (CLAUDE.md crossed 700KB after master merge) The build-llms size-budget test failed: llms-full.txt is 703,244 bytes after the v0.41.37.0 key-files annotations merged on top of master's v0.41.34/35/36 CLAUDE.md additions. Matches the v0.41.9.0 precedent (600→700); the single-fetch bundle still fits comfortably in modern long-context models. --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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d6db3f0ce3 |
v0.41.34.0 feat(search): retrieval cathedral — max-pool + title + alias + evidence (#1657)
* feat(search): per-page max-pool in searchVector (both engines) T1 of the retrieval-cathedral wave (supersedes #1616). Vector search returned chunk-grain top-k with no DISTINCT ON, so a page could be represented by a weak chunk while a hub page's chunks crowded a distinct page's strong chunk out of the candidate set entirely. Keyword search always pooled per page; the vector path did not. - New shared buildBestPerPagePoolCte() in sql-ranking.ts — single source of truth consumed by searchKeyword + searchVector across postgres + pglite, so the two engines can't drift (the recurring parity bug class). - searchVector both engines: compute score as a select-list expr (HNSW ORDER BY stays pure-distance), pool DISTINCT ON (slug) over the full candidate set before the user LIMIT, deterministic tiebreak (slug, score DESC, page_id ASC, chunk_id ASC). - All keyword pooling blocks refactored onto the shared builder (DRY). - Regression test: a hub page's chunks no longer crowd out a distinct page's strong chunk; results are one-per-page by best chunk. Fails on old path. Verified: real-Postgres engine-parity 22/22, PGLite hermetic suite green. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * feat(search): title-phrase boost (page.title first-class signal) T2 of the retrieval-cathedral wave. A query that is a phrase from a page's title ("Greek amphitheater" -> "The Mingtang - Indoor Greek Amphitheater") matched a weak body chunk instead of being recognized as a title hit. Names of things deserve weight. - New pure title-match.ts: isTitlePhraseMatch (contiguous token-run inside page.title OR exact full-title match). Precision guards: >= 2 content tokens OR exact full-title; stopword filter; token-boundary match (no raw substring). Reused by the eval later so production + bench can't drift. - applyTitleBoost post-fusion stage in hybrid.ts: reads page.title (not the brittle "first chunk"), floor-ratio-gated, stamps title_match_boost for --explain, never touches base_score (the agent's dedup confidence). - ModeBundle.title_boost knob (1.25, on in all modes - cheap gated correctness fix), search.title_boost config key, dashboard description. - KNOBS_HASH_VERSION 6 -> 7 so a boost-on cache write can't serve a boost-off lookup; all version-pin + canonical-bundle assertions updated. - 18 new tests (matcher 13 + stage 5); typecheck clean. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * feat(search): page_aliases data layer (T3 foundation) Free-text alias resolution for search. gbrain stored a page's chosen names in pages.frontmatter `aliases:` JSONB but search never consulted them, so a query like "Hall of Light" or "明堂" couldn't surface the "Mingtang" page. DELIBERATELY SEPARATE from slug_aliases (re-grounded against current code): - slug_aliases: old-slug -> canonical-slug (wikilink/get_page redirect, populated only from concept-redirect conversions) - page_aliases: normalized free-text name -> canonical slug (search hop) Overloading slug_aliases would muddy two distinct semantics, so this is a new table, not an extension (honors DRY by keeping concepts separate). - src/core/search/alias-normalize.ts: ONE normalizeAlias() (NFKC + lowercase + ws-collapse + quote-strip) + normalizeAliasList() shared by the write (ingest) and read (search) paths so they match on the same key (CQ2). - Migration v108 page_aliases (source_id, alias_norm, slug); btree (source_id, alias_norm) for indexed-equality hop, NOT ILIKE; unique TRIPLE (not source_id+alias_norm) so two pages may claim one alias — collisions reported + resolved at query time, not blocked at ingest (Codex#8). Mirror in pglite-schema.ts; Postgres fresh gets it from the migration. - engine.resolveAliases(aliasNorms, {sourceId|sourceIds}) read + setPageAliases(slug, source, aliasNorms) write, both engines, source-scoped. - 17 tests: normalize round-trip, collision, source-scope, replace, clear. Ingest projection + the hybridSearch alias hop land next (T3 wiring). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * feat(search): alias hop + ingest projection (T3 wiring) Wires the page_aliases data layer into ingest (write) and hybridSearch (read) so a query that is a page's declared chosen name surfaces that page — the named-thing class neither max-pool nor title-boost can fix (true synonyms with zero surface overlap: "Hall of Light" / "明堂" -> the Mingtang page). - Ingest projection (import-file.ts): after the page write commits, normalizeAliasList(frontmatter.aliases) -> engine.setPageAliases. Always called (even []) so removing an alias clears its row; content_hash includes non-timestamp frontmatter so alias edits reach this path, not the skip branch. Fail-soft + pre-v108-safe (isUndefinedTableError swallowed). - applyAliasHop (hybrid.ts), AFTER rerank so a named query reliably surfaces its page: FULL normalized-query exact match only (no substring/n-grams), skip >6-token prose queries, present-boost 1.10x / inject absent canonical at top-of-organic + epsilon (never absolute 1.0, D3), collisions alpha-ordered + capped at 3, fail-open on pre-v108 / lookup error (D9). Stamps alias_hit for the T4 evidence contract. - SearchResult.alias_hit attribution field. - 8 tests: inject/boost/CJK/no-match/long-skip/collision + ingest projection round-trip + alias-removal-clears. 73 pass across the T1/T2/T3 + import suite. Backfill of existing pages' aliases lands as T8 (reindex --aliases). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * feat(search): evidence/create_safety contract + search→cheap-hybrid + per-call mode (T4) The agent-facing fix for the incident's ROOT behavior: tonight the agent read a single blended 0.64 score, decided "no strong match, safe to write a new page", and wrote a duplicate on a developed concept page. A blended RRF/cosine score is not a calibrated probability, so the don't-duplicate decision must key off WHY a page matched, not a raw number. - evidence.ts: classifyEvidence (alias_hit > exact_title_match > high_vector_match > keyword_exact > weak_semantic) + createSafetyFor (exists | probable | unknown). stampEvidence runs at the end of every hybrid return path (main + both keyword fallbacks). SearchResult gains evidence + create_safety. The agent keys don't-duplicate off create_safety='exists', not a score threshold. - search op → cheap-hybrid everywhere (D4/D15): full vector+keyword+RRF+pool+ title+alias, expansion OFF (no per-call LLM cost); `query` stays full-control. search.mcp_keyword_only escape hatch (D17) keeps the old keyword-only behavior for operators who don't want query text sent to an embedding provider. - Alias hop + evidence now also run on the keyword-only fallback paths (the named-thing fix is most valuable exactly when vector is unavailable). - Per-call `mode` (D5): honored ONLY for local/trusted callers (ctx.remote=== false) so a remote OAuth client can't escalate to costly tokenmax; local + unknown mode rejects loudly; threaded into resolveSearchMode + the cache key. - 30 tests (evidence classifier incl. before/after-incident cases, per-call mode gate, alias hop). Updated mcp-eval-capture to the new cheap-hybrid contract. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(cli): reconcile `gbrain search` dispatch (T5) After T4 made the `search` op cheap-hybrid, `gbrain search "x"` already does the right thing — but `gbrain search modes/stats/tune` would have run a hybrid search for the literal word "modes" instead of opening the config dashboard (the op intercepts before the unreachable handleCliOnly dashboard path). Add a pre-dispatch interception in main(): `search` + subArgs[0] in {modes,stats,tune} → runSearch dashboard (with the v0.41.6.0 read-only connect+ dispatch 10s timeout preserved); everything else (free-text) falls through to the cheap-hybrid `search` op. Subprocess test pins all three routes: modes/stats → dashboard, free-text → search op ("No results", not "Unknown subcommand"). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * feat(eval): NamedThingBench retrieval-quality gate (T6) The eval that makes the retrieval-maxpool incident impossible to reintroduce silently. 7 query families, each a failure class the incident exposed: title-substring, generic-to-named, alias-synonym, multi-chunk-dilution, short-vs-rich, graph-relationship, hard-negative. - src/eval/retrieval-quality/harness.ts: pure scoring (Hit@1/Hit@3/MRR per family) + injected SearchFn (CLI uses hybridSearch; tests stub it) + evaluateGate. D12 gate: hard-gate the families that ARE the bug from day one (title-substring Hit@1>=0.95, alias-synonym Hit@1>=0.98, dilution Hit@3=1.0), warn-then-enforce the softer families. Env-overridable floors. - `gbrain eval retrieval-quality <fixture.jsonl> [--json] [--source]` + dispatch in eval.ts. Exit 0 PASS / 1 FAIL / 2 USAGE. - Synthetic fixture (placeholder names only, privacy-grep guarded) + hermetic gate test: seeds a synthetic brain, forces the keyword+title+alias path (embed transport stubbed to throw — free, deterministic), asserts the bug families pass. The vector max-pool guarantee is pinned separately by searchvector-maxpool.test.ts. - CI gate: the hermetic test is a normal unit test, so it runs in every PR shard — the gate is live on every change. - 23 tests (harness unit + hermetic gate + fixture privacy guard). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * feat(telemetry): rank-1 score drift signal (T7) Standing observability so a retrieval regression is caught before a human hits it in chat (like tonight). Aggregate columns on search_telemetry (NOT per-query rows, D10): sum_rank1_score + count_rank1 + 3 coarse buckets (<0.6 / 0.6-0.85 / >=0.85). The mean rank-1 base_score is the headline; a downward drift = retrieval quality regressing. - hybrid.ts: capture rank-1 base_score at all three return paths, thread through emitMeta → recordSearchTelemetry opts (like results_count). - telemetry.ts: Bucket + record + flush ON CONFLICT-add + readSearchStats expose avg_rank1_score (null when no samples — no NaN) + rank1_distribution. - Migration v109 ADD COLUMN IF NOT EXISTS (both engines; search_telemetry lives only in migration v57, so the v57+v109 chain covers fresh + upgrade). Columns exempted in schema-bootstrap-coverage (no forward-ref index → no bootstrap need). - `gbrain search stats` surfaces the avg + bucket line; JSON envelope auto-carries the fields. "true-positive" wording dropped per Codex#14 — production has no labels, so this is an unlabeled rank-1 score histogram; labeled calibration lives in NamedThingBench (T6). - 3 round-trip tests (mean+buckets, no-result excluded, empty=null). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * feat(reindex): gbrain reindex --aliases backfill (T8) Import-time projection (T3) covers new + changed pages; this backfills EXISTING pages whose frontmatter `aliases:` predate v108 / the projection. Walks listAllPageRefs (cheap cross-source (source_id, slug) enumeration), reads each page's frontmatter aliases, writes page_aliases via setPageAliases. Idempotent (setPageAliases replaces) so re-running is convergent — no op-checkpoint needed (fast, no embedding). --dry-run reports would-write counts, --source narrows, --limit caps, --json envelope, progress reporter. Wired into the `reindex` dispatch alongside --markdown / --multimodal. 4 tests: backfill from array + comma-scalar frontmatter, --dry-run writes nothing, idempotent second run. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * test(search): pre-migration fail-open regression (T9) Pins that pre-v108 brains (no page_aliases table) keep working: applyAliasHop returns input unchanged + doesn't throw, importFromContent with frontmatter aliases still imports (projection swallows table-missing via isUndefinedTableError), and resolveAliases surfaces the error for the caller to catch. Completes the T9 mandatory regression set (dilution → searchvector-maxpool, dispatch → cli-search-dispatch, MCP contract → mcp-eval-capture, engine parity → engine-parity 22/22, pre-migration → here). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * feat(search): Phase-0 retrieval diagnostic — `gbrain search diagnose` (T0) The operator-facing trace the user runs against the production brain to pin which retrieval layer surfaces (or misses) a target page — the diagnostic the plan front-loaded so we don't ship a fix that doesn't move the incident. `gbrain search diagnose "<query>" --target <slug> [--json] [--source]` reports, for the target: keyword rank+score, vector rank+score (skipped/graceful if no embedding provider), whether the query is a registered alias, and the hybrid final rank + evidence + create_safety + which boosts fired (title/alias). The verdict names the layer that surfaces the target at rank 1 (or "none"), telling you whether the lever is max-pool/innerLimit (vector) vs title/alias. Wired into the `search` dispatch alongside modes/stats/tune (60s timeout since it runs real retrieval). 2 hermetic tests (alias-query trace + title-phrase trace). For the Mingtang incident, run: gbrain search diagnose "Greek amphitheater" --target projects/new-greek-theater/concept_v0 Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs(retrieval): corrected incident record + named-thing layers + glossary (T10) - RETRIEVAL_MAXPOOL_INCIDENT.md: replaces closed PR #1616's RFC with the verified record — what happened, the disease, the corrections to the RFC's mechanics (search was keyword-only, --mode unthreaded, hybrid already pooled at dedup, aliases dead to search), the four-layer fix that shipped, and the triage commands (search diagnose / reindex --aliases / search stats / eval retrieval-quality). - RETRIEVAL.md: new "Named-thing retrieval" section documenting per-page pool + title boost + alias hop + the evidence contract, reconciling the doc with the shipped pipeline (closes the doc/reality gap). - metric-glossary.ts + regenerated METRIC_GLOSSARY.md: Hit@1, Hit@3, avg_rank1_score (drift signal, not labeled accuracy), and create_safety (the evidence contract) now carry plain-English glossary entries. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * test(eval): NamedThingBench fixture privacy guard via slug-shape (T6 fixup) The banned-name literal list itself tripped check-privacy/check-test-real-names. Replace it with the load-bearing assertion: every fixture slug must be an *-example placeholder (no real brain page can be referenced). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(search): source-isolation in per-page pool + alias hop (P0, codex adversarial) Codex outside-voice caught two source-isolation P0s in the retrieval wave — the exact class the v0.34.1 seal guards. Both fixed before merge. P0-1: buildBestPerPagePoolCte pooled on `slug` alone. In a federated brain, two pages with the same slug in different sources collapsed before ranking/pagination (the neighbor-source page dropped). Now DISTINCT ON (COALESCE(source_id,'default'), slug) — composite key matching dedup.ts's pageKey. Also fixes the PRE-EXISTING keyword-path bug (best_per_page was slug-only before this wave); real-PG parity 23/23. P0-2: the alias hop dropped source_id. resolveAliases returned bare slugs and applyAliasHop hydrated via getPage(slug, undefined), so a federated caller could get the default-source page injected or the right allowed-source page suppressed. resolveAliases now returns {slug, source_id} pairs; applyAliasHop matches by (source_id, slug) and fetches each canonical in its OWN source. Regression tests: alias hop boosts only the aliased source (not same-slug in another source); resolveAliases keeps cross-source same-slug distinct. Deferred as documented tradeoffs (TODO): evidence high_vector_match label uses blended base_score not pure cosine; deep-pagination candidate budget is chunk-bounded; telemetry writes swallow errors pre-v109 on rolling deploys. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * chore: bump version and changelog (v0.41.30.0) Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * docs: v0.41.30.0 retrieval cathedral — CLAUDE.md key files + llms regen Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * chore: renumber release v0.41.30.0 → v0.41.34.0 (queue moved) Version trio + CHANGELOG header + CLAUDE.md key-file annotations + TODOS heading + regenerated llms bundles, all moved to 0.41.34.0. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(ci): restore glossary roster + harden facts-anti-loop hook budget Two CI failures surfaced after the master merges that brought the branch to 111 migrations: 1. shard 1 — `ALL_METRICS roster > matches the renderer output (no orphans)`: the merge took master's `renderMetricGlossaryMarkdown` whose `groups` array lacked this branch's 4 retrieval-quality keys (hit@1, hit@3, avg_rank1_score, create_safety). `ALL_METRICS` (derived via Object.keys) kept them, so the roster test saw 4 orphans. The freshness check (check:eval-glossary) passed because renderer-output == committed doc — it can't catch a renderer that drops a metric; the roster test can. Restored the "Retrieval-Quality / Evidence Metrics (NamedThingBench)" group + regenerated docs/eval/METRIC_GLOSSARY.md. 2. shard 2 — facts-anti-loop's two engine-dependent put_page tests failed while the two engine-free extractFactsFromTurn tests passed (the signature of a partially-failed beforeAll). This file has a documented PGLite-cold-start-under-deep-shard-load timeout history; the 30s budget was tuned for 95 migrations and the chain is now 111. Bumped to 60s. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(ci): isolate facts-anti-loop in its own process (serial) Follow-up to the prior hook-timeout bump, which was the wrong theory: the [58ms]/[71ms] body times in the re-run prove beforeAll did NOT time out — the engine connects and the two put_page tests run and fail for real, while the two engine-free extractFactsFromTurn tests in the same file pass. put_page (via dispatchToolCall) touches process-global singletons (the facts queue + the AI gateway used by importFromContent's embed step). Some sibling file in the 78-file shard-2 process leaves residual global state that makes put_page's pre-backstop path fail on the CI runner. The failure is NOT reproducible alone, in a Linux oven/bun:1 container, or in a full local shard-2 run (1172 pass) — only on the GitHub runner, deterministically. Per CLAUDE.md's test-isolation rules, a test coupled to shared process state belongs in its own process. Renamed to *.serial.test.ts so it runs in the dedicated serial-tests job (scripts/run-serial-tests.sh spawns a fresh `bun test` per serial file), where it passes deterministically; test-shard.sh excludes serial files from the matrix. Updated the comment to reflect the real cause and refreshed the test-weights.json key. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> * fix(ci): close cross-file gateway-config pollution in test shards The prior serial-move theory was incomplete. The real, single root cause behind all three shard failures (2, 5, 10) is cross-file AI-gateway config pollution within a shard's bun process: - A test calls configureGateway() and doesn't restore the gateway on exit. The legacy-embedding preload pins OpenAI/1536 ONCE at process start and re-pins per-test ONLY when the gateway slot is empty — so a leaker that reconfigured the gateway to the v0.37 default (zeroentropyai:zembed-1 / 1280-d) and never reset poisons every later file in the shard. - Victim A (shard 5, test/search/searchvector-maxpool.test.ts): runs initSchema in beforeAll under the leaked gateway → content_chunks.embedding becomes vector(1280) → inserting its hardcoded 1536-d basis vectors throws pgvector CheckExpectedDim. - Victims B/C (shard 10 facts-backstop-gating, shard 2 facts-anti-loop): put_page's importFromContent embeds by design (embed failure PROPAGATES, Codex C2). Under a leaked fake-key gateway the embed step 401s and put_page returns isError → the backstop assertions fail. My branch's shard re-partition (added test files + weight changes) merely co-located leakers with victims; the hazard was latent. Fixes (root cause + self-sufficient victims): - test/search/rerank.test.ts (the shard-5 leaker): add afterAll(resetGateway). Its stub omits embedding_model, so it fell back to the ZE/1280 default; now it restores the empty slot so the preload re-pins legacy for the next file. - test/search/searchvector-maxpool.test.ts: pin configureGateway(openai/1536) in beforeAll BEFORE initSchema (initSchema runs before any preload beforeEach, so it can't rely on the inherited slot). - test/facts-backstop-gating.test.ts + test/facts-anti-loop.test.ts: reset the gateway in beforeEach so put_page's embed is a graceful no-op; reverted anti-loop from the serial quarantine back into the matrix (the serial move was the wrong fix for a gateway-state problem). Validated deterministically: a non-resetting leaker that poisons the gateway to ZE, run first in one bun process, no longer breaks any of the three victims (14/14 pass). verify 29/29, typecheck clean, isolation lint clean. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com> |
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ffac8ce0f4 |
v0.41.27.0 fix: withRetry self-heals on null singleton + facts:absorb drain + disconnect audit (closes #1570) (#1608)
* merge master: rebump v0.41.25.0 → v0.41.27.0 (queue collision) Master shipped v0.41.25.0 (#1538 batched sync deletes) and v0.41.26.0 (#1571 dream --source fix) while this branch was in flight. Conflict resolution rebumps to the next available slot. - VERSION: 0.41.25.0 → 0.41.27.0 - package.json: synced - CHANGELOG.md: my v0.41.27.0 entry placed above master's v0.41.26.0 and v0.41.25.0; in-entry version references updated 0.41.25.0 → 0.41.27.0 and forward-references bumped to v0.41.28+. - TODOS.md: kept master's v0.41.20.x section + my v0.41.27.0+ follow-ups No source-file conflicts during the merge. * feat(diagnostics): db-disconnect audit + doctor surface (v0.41.27.0) Instruments every db.disconnect() and PostgresEngine.disconnect() call with a JSONL audit record so the next user-reported #1570 cycle gives us the offender's caller stack instead of the symptomatic "No database connection" error. Audit shape (~/.gbrain/audit/db-disconnect-YYYY-Www.jsonl): {ts, engine_kind, connection_style, caller_stack[], command, pid} - src/core/audit/db-disconnect-audit.ts (NEW): the audit writer, built on the v0.40.4.0 createAuditWriter cathedral. Captures a 6-frame stack via new Error().stack so the offender is readable without spending stderr noise. - src/core/db.ts: logDbDisconnect call at the top of disconnect() (best-effort; never blocks the real teardown). - src/core/postgres-engine.ts: same instrumentation in PostgresEngine.disconnect() — distinguishes 'module' vs 'instance' connection_style so we can tell legitimate worker-pool teardowns apart from the load-bearing module-singleton class. - src/commands/doctor.ts: extends batch_retry_health to surface 24h disconnect count + most-recent caller stack. Warns when the caller frame isn't a known CLI-exit frame (e.g. cli.ts's finally block at the end of an op-dispatch). This is the diagnostic that tells v0.41.28+ where to apply the real ownership fix. - test/db-disconnect-audit.test.ts: unit coverage for the audit writer + caller-stack capture + JSONL shape. - test/e2e/db-singleton-shared-recovery.test.ts: real-Postgres regression that exercises the singleton-null path end-to-end. Refs #1570 * feat(retry): self-heal on null singleton — closes #1570 symptom (v0.41.27.0) withRetry gains an opt-in reconnect callback that fires between the isRetryableConnError classification and the inter-attempt sleep. PostgresEngine.batchRetry injects this.reconnect() — race-safe via the existing _reconnecting guard, handles module and instance pools. Closes the production loss reported in #1570: dream cycles on Supabase no longer drop ~150 link rows per cycle when the singleton goes null mid-batch. The retry now rebuilds the connection between attempts so the second try has somewhere to write to. - src/core/retry.ts: WithRetryOpts gains `reconnect?: () => Promise<void>`. Awaited in the catch branch. onRetry is also now awaited (back-compat- safe: every existing in-tree caller is a sync arrow). Reconnect failures propagate as the real cause — replaces the symptomatic "No database connection" error with whatever the connect() throw was, so operators see the truth. - src/core/postgres-engine.ts:batchRetry — injects `reconnect: () => this.reconnect()`. Covers all 9 batch-retry call sites (addLinksBatch, addTimelineEntriesBatch, upsertChunks, plus the 6 caller-supplied auditSite labels in extract / sync / reindex). - test/core/retry-reconnect.test.ts: 8 hermetic cases pinning the contract — reconnect fires before sleep, only on retryable errors, back-compat when omitted, signal-aborted bypasses reconnect, onRetry is awaited, full success path end-to-end. The deeper bug (who's calling disconnect mid-cycle) is left unaddressed in this commit by design — the diagnostic instrumentation in the prior commit will tell us in the next production run. Refs #1570 * feat(facts): drainPending() + CLI await before disconnect (v0.41.27.0) Closes the silent 'No database connection' tail-end errors after gbrain capture / put_page: the facts:absorb fire-and-forget queue sometimes outlived the CLI process's connection lifetime, so absorb attempts after engine.disconnect() landed in stderr as the GBrainError shape. - src/core/facts/queue.ts: new drainPending({timeout: 1000}) method distinct from shutdown(). Stops accepting new enqueues, awaits in-flight settle, bounded by timeout, returns count of unfinished. Semantically different from shutdown() (which aborts in-flight) so the symptom — drop work that hasn't started yet but let in-flight work finish — matches what CLI exit actually needs. - src/cli.ts: op-dispatch finally block awaits the drain BEFORE engine.disconnect(). Bounded 1s. Opt-out env GBRAIN_NO_FACTS_DRAIN for callers that don't enqueue (keeps fast-exit paths fast). Mirrors the v0.41.8.0 awaitPendingLastRetrievedWrites pattern. - test/facts-queue-drain-pending.test.ts: 6 hermetic cases — empty drain returns immediately, single in-flight settles, timeout bounds wait, shutdown-after-drain is idempotent, post-drain enqueues are dropped, signal-aborted skips waiting. Refs #1570 * docs: update project documentation for v0.41.27.0 README.md: added troubleshooting entry for the v0.41.27.0 retry-reconnect + facts:absorb drain fix (closes #1570), pointing operators at `gbrain doctor --json` to find the offending disconnect caller. CLAUDE.md: extended `src/core/retry.ts` entry with the new optional `reconnect` callback (v0.41.27.0); added two new Key Files entries for `src/core/audit/db-disconnect-audit.ts` (the diagnostic half of the "instrument first, fix later" pivot) and `FactsQueue.drainPending`; extended `doctor.ts:checkBatchRetryHealth` entry with the in-place extension that surfaces 24h disconnect-call count. llms-full.txt: regenerated to absorb CLAUDE.md edits. Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> * chore: rebump v0.41.27.0 → v0.41.28.0 (queue collision with #1573) Master shipped v0.41.27.0 (#1573 git-aware sync_freshness) claiming the same slot. Rebump to the next available version. - VERSION + package.json → 0.41.28.0 - CHANGELOG.md: my entry header + in-entry refs 0.41.27.0 → 0.41.28.0 - TODOS.md: my #1570 follow-up section header + body refs bumped * test: pin gateway in put-page-provenance + embedding-dim-check (CI shard fix) Both files failed on CI shards 1 and 8 under the cross-file gateway-state leak class (CLAUDE.md "Test-isolation lint and helpers"). The v0.41.28.0 merge reshuffled the weight-based shard bin-packing, landing a gateway-mutating sibling ahead of these two victims in the same `bun test` process. Mechanism: - put-page-provenance: put_page embeds via the gateway. A sibling left the gateway configured with OpenAI + the CI placeholder `sk-test` (captured at configureGateway time, survives the withEnv restore as cached gateway state). put_page's embed then fired against live OpenAI and 401'd. The bunfig legacy-embedding preload's beforeEach only re-applies legacy when the gateway was RESET — it does NOT correct a sibling that configured a different LIVE config. - embedding-dim-check: initSchema builds the content_chunks vector column at the gateway's configured dim. A sibling leaking ZE/1280 made the column 1280-d, so `expect(dims).toBe(1536)` failed. Fix (victim-side pinning, the escape hatch the preload documents): - Both: configure the gateway explicitly in beforeAll BEFORE initSchema (OpenAI/1536), resetGateway() in afterAll so neither leaks onward. - put-page-provenance also stubs the embed transport via __setEmbedTransportForTests so embed is deterministic and offline; a dummy OPENAI_API_KEY is supplied in the gateway env because instantiateEmbedding builds the OpenAI client (key check) BEFORE the stubbed transport is reached — the stub then intercepts the actual call so the key never leaves the process. Verified: CI shards 1 (1337 pass) + 8 (905 pass) green with OPENAI_API_KEY unset, plus adversarial sibling orderings (gateway.test / doctor-ze-checks preceding). Typecheck + check-test-isolation clean. --------- Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com> |
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127842e9ef |
v0.41.22.1 feat: brainstorm/lsd judge fixes (closes #1540 end-to-end) (#1562)
* feat(core): add splitProviderModelId centralizer for pricing-side parsing
New pure helper in src/core/model-id.ts that splits provider:model,
provider/model, and bare model strings into a {provider, model} pair.
Defensive contract: null/undefined/empty/whitespace returns
{provider: null, model: ''}.
Will be wired into the 5 pricing/budget sites in the next commit.
Named splitProviderModelId (not parseModelId) to avoid the in-project
collision with the gateway-side src/core/ai/model-resolver.ts:parseModelId
which has a different bare-name contract.
Pinned by 16 cases in test/model-id.test.ts covering all separator
forms plus defensive + edge inputs.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* feat(gateway): accept slash-form provider id in model-resolver
src/core/ai/model-resolver.ts:parseModelId now accepts both
provider:model (colon) and provider/model (slash) forms. Colon wins
when both separators present so OpenRouter nested ids like
openrouter:anthropic/claude-sonnet-4.6 route as
{providerId: 'openrouter', modelId: 'anthropic/claude-sonnet-4.6'}.
Pre-fix: every gateway entry point (chat / embed / rerank) threw
AIConfigError 'missing a provider prefix' on slash form ids. That
meant CLI users running
gbrain brainstorm --judge-model anthropic/claude-sonnet-4-6
would still fail mid-judge with AIConfigError even after pricing
was relaxed to accept slash form. Closes the end-to-end bug class.
Bare names without ANY separator still throw — gateway routing
always needs an explicit provider. Existing tests pinning that
throw (test/ai/capabilities.test.ts:43) stay green.
Pinned by 10 cases in test/ai/model-resolver-slash.test.ts
including a resolveRecipe round-trip that slash and colon forms
land on the same recipe.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* refactor: route 5 pricing/config sites through splitProviderModelId
Five sites had inline ':'-only provider-prefix splits that silently
missed slash-form ids. Centralizing through splitProviderModelId
closes the bug class:
- src/core/anthropic-pricing.ts:estimateMaxCostUsd
- src/core/budget/budget-tracker.ts:lookupPricing (closes the
headline BudgetExhausted no_pricing failure on --max-cost +
slash-form --judge-model)
- src/core/eval-contradictions/cost-tracker.ts:pricingFor
(legacy silent-Haiku fallback preserved per plan D9)
- src/core/minions/batch-projection.ts (deleted bareModel inline
helper; inlined splitProviderModelId at 2 call sites)
- src/core/model-config.ts:isAnthropicProvider (silently fixed
v0.31.12 subagent-guard bypass for slash-form Anthropic ids)
Test gates land together so any bisect step is green:
- NEW test/anthropic-pricing.test.ts (7 cases including structural
regression guard: every ANTHROPIC_PRICING key reachable via all
three forms)
- NEW test/eval-contradictions/cost-tracker-slash.test.ts (6 cases
including legacy-Haiku-fallback pin)
- EXTENDED test/batch-projection.test.ts (slash + double-separator
cases)
- EXTENDED test/model-config.serial.test.ts (2 slash-form
isAnthropicProvider cases)
- EXTENDED test/core/budget/budget-tracker.test.ts (2 slash + colon
reserve() cases)
Behavior changes for slash-prefix ids only; bare and colon ids
unchanged.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* feat(brainstorm): scale judge maxTokens with per-model output cap
Replace the hard-coded maxTokens: 4000 with computeJudgeMaxTokens
that scales with idea count and respects each model's actual output
cap.
Pre-fix: any judge call with 36+ ideas produced ~100 tokens/idea of
JSON that got truncated mid-output. parseJudgeJSON threw, orchestrator
surfaced judge_failed: true, all ideas saved unscored. Verified
failure mode on 72-idea fixture: 0/72 passing before, 39/72 after.
Formula: min(modelCap, max(LEGACY_MIN_MAX_TOKENS, ideaCount*150+500))
Named constants extracted at top of judges.ts:
- TOKEN_BUDGET_PER_IDEA = 150 (1.5x headroom over observed ~100/idea)
- TOKEN_BUDGET_ENVELOPE = 500 (JSON wrapper)
- LEGACY_MIN_MAX_TOKENS = 4000 (pre-fix floor preserved for 1-idea)
- MAX_OUTPUT_TOKENS_CEIL = 32_000 (fallback when model unknown)
- ANTHROPIC_OUTPUT_CAPS (per-model: Opus 4.7 = 32K, Sonnet 4.6 /
Haiku 4.5 = 64K, legacy 3.5 = 8K)
When the caller passes no modelOverride, the cap routes through the
gateway's actual configured chat model via getChatModel() so the
formula matches what chat() will use, not whatever the override
hints at. Pre-fix the undefined-override case fell back to 32K even
if the configured default was a legacy 8K model.
Pinned by 16 cases in test/brainstorm/judges-maxtokens.test.ts:
formula at 1/10/36/96/200/300 ideas, per-model cap binding (Haiku 3.5
8K, Opus 4.7 32K, Sonnet 4.6 64K), and integration via runJudge with
a stubbed chatFn that captures ChatOpts.maxTokens.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* chore: bump version and changelog (v0.41.21.0)
Brainstorm judge fix-wave: closes #1540 end-to-end. parseModelId
centralizer + gateway resolver slash-form acceptance + per-model
maxTokens cap.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* docs: update project documentation for v0.41.21.0
CLAUDE.md: add v0.41.21.0 annotations to brainstorm/judges + model-config
entries; add new key-files entry for src/core/model-id.ts (the shared
splitProviderModelId centralizer) and src/core/ai/model-resolver.ts
slash-form extension.
README.md: add user-facing callout for the brainstorm judge_failed +
slash-form pricing fix, mirroring the v0.41.19.0 callout shape.
llms-full.txt: regenerated to absorb the CLAUDE.md + README changes
(passes test/build-llms.test.ts drift guard).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com>
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5d42f3295e |
v0.41.22.0 feat: type-unification cathedral — 94 types → 15 canonical (closes #1479) (#1542)
* Merge branch 'master' into garrytan/type-taxonomy-unification Resolve VERSION, package.json, CHANGELOG conflicts with v0.41.22.0 on top, preserving master's v0.41.19.0 entry below. * feat: v0.41.22.0 type-unification cathedral — collapse 94 types to 15 (closes #1479) Ships gbrain-base-v2 as the new install default (15 canonical types: 14 + note catch-all) and the unify-types PROTECTED Minion handler that runs the gbrain-base→v2 migration end-to-end on existing brains. What this delivers: - gbrain-base-v2.yaml standalone schema pack (no extends:) with 14 canonical page_types + 9 cluster mapping_rules + catch-all sentinel - 3 new schema-pack primitives: runRetypeCore (chunked UPDATE with legacy_type stamping), runPageToLinkCore (edge-shaped pages → link rows), runPageToAliasCore (concept-redirect → slug_aliases) - rewriteLinksBatch for N-pair atomic FK rewrite - Migration v104 slug_aliases table (forward-bootstrap probed on both engines for safe upgrade chain) - New engine method resolveSlugWithAlias(slug, sourceOrSources) on both Postgres + PGLite with multi-source ambiguity warning - inferTypeAndSubtypeFromPack overload + subtypes: + mapping_rules: + migration_from: schema-pack manifest extensions - findPackSuccessors version-range walker (1.x / 1.0.x / exact match) - expandTypeFilter for --type back-compat (D14): legacy aliases route through mapping_rules → canonical+subtype before the SQL filter fires - 3 new onboard checks: pack_upgrade_available, type_proliferation, dangling_aliases (source-scoped per F12) - unify-types Minion handler (PROTECTED, manual_only via render.ts allowlist per D17): retype-explicit → retype-catch-all → page-to-link → page-to-alias → final sync → active-pack flip - alias_resolved 1.05x post-fusion search boost stage; KNOBS_HASH_VERSION bumped 5→6 (one-time cache miss on upgrade, self-healing in TTL) - ELIGIBLE_TYPES for facts extraction extended with v2 canonicals (codex F-ELIGIBLE: blocker not v0.43 follow-up) Tests: 79 new unit/integration cases + 3 E2E cases covering all 9 production clusters end-to-end. 124-case verification on the cache-key + build-llms fixes. KNOBS_HASH_VERSION assertions updated in 3 tests. Plan: ~/.claude/plans/system-instruction-you-are-working-transient-elephant.md (16 locked decisions D1-D17, 12 baseline fixes F7-F21 absorbed from codex outside voice). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: CI verify failures — system-of-record allow-comment + schema-unify manifest registration Two CI failures on PR #1542: 1. check:system-of-record flagged page-to-link.ts:207 addLinksBatch as a direct write to a derived table. The call IS the reconcile surface for page_to_link mapping_rules — it converts edge-shaped pages into canonical link rows under the PROTECTED unify-types Minion handler, source-scoped, atomic per-rule. Added the canonical `// gbrain-allow-direct-insert: <reason>` comment on the same line. 2. check:resolver emitted 11 orphan_trigger warnings for `schema-unify` because the skill was added to skills/RESOLVER.md without a corresponding entry in skills/manifest.json. Added the registration under the existing skills[] array. bun run verify: 28/28 checks pass locally. * fix: CI test failures — schema-unify conformance + eligibility regression Six test failures across shards 2 + 10 on PR #1542: 1. resolver.test.ts: round-trip parser requires frontmatter triggers to be quoted (`- "..."` or `- '...'`). schema-unify shipped with bare YAML strings; quoted the 10 triggers to round-trip correctly. 2. skills-conformance.test.ts (×3): schema-unify SKILL.md was missing the required Contract, Anti-Patterns, and Output Format sections that every conformant skill must declare. Added all three: - Contract: inputs / outputs / side effects / failure modes - Anti-Patterns: 5 DON'Ts including the autopilot trust boundary - Output Format: per-phase stderr lines + celebration summary + JSON envelope shape 3. facts-eligibility.test.ts (×2): the v0.41.22 ELIGIBLE_TYPES expansion added `concept` to the eligible list, but the existing test suite pins concept as rejected (it's `extractable: true` in the schema pack but the v0.41.11 contract documented this as "cosmetic on the backstop path because backstop uses hardcoded ELIGIBLE_TYPES"). Removed `concept` from the expansion; other v2 canonicals (media, tweet, atom, analysis) stay. Comment updated to document the deliberate omission. All 6 failing tests now pass locally (370/370 across the 3 affected files). bun run verify: 28/28 checks green. * fix: harden findPackSuccessors test against shard pollution CI shard 8 reported 1 fail (1.00ms — too fast for any real loadActivePack file I/O) on `finds gbrain-base-v2 as successor of gbrain-base@1.0.0`. Local triple-run passes 9/9 in isolation. Root cause: the existing afterEach reset clears the module-level pack cache AFTER each test, but the FIRST test in the file inherits whatever state sibling files in the same bun shard process left behind. With 24+ schema-pack tests in shard 8 (mutate, mutate-audit, best-effort, registry-reload, manifest-v041_2, etc.) running before this file, the first test can read a poisoned cache. Fix: add `beforeEach(_resetPackCacheForTests)`. Two-sided reset guarantees clean state regardless of file ordering within the shard. bun run verify: 28/28 checks pass. * fix: quarantine two flaky tests to serial runner CI shard 1 + shard 8 each surfaced one intermittent failure: shard 1: buildBrainTools > execute() on put_page with valid namespace shard 8: findPackSuccessors > finds gbrain-base-v2 as successor Both pass cleanly in isolation. Both are concurrency races against shared in-shard state: - brain-allowlist.test.ts shares a singleton PGLiteEngine across 18 tests with a beforeEach DELETE FROM pages. With max-concurrency=4, two put_page tests can interleave their TRUNCATE + write phases, so the auto-link/extract sub-steps inside put_page race against the sibling test's DELETE. - schema-pack-find-pack-successors.test.ts reads bundled YAML packs via loadActivePack. The module-level pack cache is shared across parallel tests in the same shard; the previous beforeEach reset helped but didn't fully isolate against concurrent file reads under CI load. Fix per CLAUDE.md test-isolation lint rule R2 (concurrency-fragile files belong in the .serial.test.ts quarantine): rename both files to *.serial.test.ts. Serial runner picks them up at max-concurrency=1. 49/49 serial files pass locally. 28/28 verify checks pass. * fix: quarantine embed-stale test to serial runner CI shard 9 reported 6 failures, all from the embedStaleForSource describe block, all ~120-150ms each — classic shared-engine concurrency race shape. Passes 7/7 locally in isolation. Root cause: embed-stale.test.ts shares a singleton PGLiteEngine across 7 tests with beforeEach resetPgliteState. Under bun's max-concurrency=4 in the parallel shard, two tests can interleave their TRUNCATE + seedPage + upsertChunks + embedStaleForSource flow, so one test's stale-chunk count sees another test's mid-flight writes. Same fix as brain-allowlist.serial.test.ts and schema-pack-find-pack-successors.serial.test.ts: rename to *.serial.test.ts so the serial runner picks it up at max-concurrency=1. bun run verify: 28/28 checks pass. 7/7 embed-stale tests pass via serial. --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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a7b79b66d4 |
feat: v0.41.19.0 Supavisor Retry Cathedral (#1537)
Engine-level retry primitive that closes the v0.41.17 production incident
where ~3,000 wiki links + timeline entries were silently lost per dream
cycle on a 16K-page brain. Supavisor's circuit-breaker takes 5-10s to
recover; the prior single-500ms-retry shape couldn't survive it.
ARCHITECTURE
============
Retry becomes a data-primitive contract, not a caller responsibility.
postgres-engine.ts + pglite-engine.ts now self-retry inside addLinksBatch,
addTimelineEntriesBatch, and upsertChunks. Every caller — current AND
future — inherits retry-for-free. CI lint guard `scripts/check-no-double-retry.sh`
fails the build if anyone re-wraps an engine batch method (preventing
3×3=9 retry amplification on incomplete reverts).
CODEX-HARDENED DEFAULTS
=======================
BULK_RETRY_OPTS = {maxRetries:3, delayMs:1000, delayMaxMs:10000,
jitter:'decorrelated'}. Total worst-case wait ≈12s covers full Supavisor
recovery window. Decorrelated jitter (AWS-style uniform(base, prevDelay*3)
capped at maxDelay) replaces 'full' which allowed near-zero retries that
re-hit the still-recovering breaker.
AbortSignal threading from MinionWorker.shutdownAbort.signal through
engine method opts → withRetry → abortableSleep. SIGTERM aborts sleeping
retries instead of blocking deploys for up to delayMaxMs.
OBSERVABILITY
=============
`~/.gbrain/audit/batch-retry-YYYY-Www.jsonl` records every retry event
(success-after-blip AND exhausted-retries). Built on the v0.40.4.0
audit-writer cathedral. Privacy posture: never logs slugs / page IDs /
content (mirrors shell-audit.ts).
`gbrain doctor` learns `batch_retry_health` check. Reads last 24h
(not 7d — codex H-9: avoid permanent noise from one historical blip).
Thresholds: ok (zero or <3 same-site), warn (>=3 same-site OR >=5
cross-site), fail (>=20 sustained breaker). Surfaces bad GBRAIN_BULK_*
env at startup (codex M-10). Corrupt-JSONL tolerant.
30-day audit pruning hooked into the dream cycle's purge phase (codex H-8
— implements the 'pruning convention' for real).
OPERATOR TUNING
===============
GBRAIN_BULK_MAX_RETRIES (int >= 0; 0 disables retries for debugging)
GBRAIN_BULK_RETRY_BASE_MS (int > 0)
GBRAIN_BULK_RETRY_MAX_MS (int >= base)
Bad values throw GBrainError with paste-ready fix hints at doctor startup,
not at first-retry mid-cycle.
VERIFICATION
============
- bun run verify: 28/28 checks green (includes 2 new lint guards:
check-no-double-retry, check-batch-audit-site)
- bun run test: 11453 pass / 1 pre-existing flake (schema-cli.test.ts —
confirmed by running on clean master, NOT introduced by this wave)
- bun run test:slow: 40/40 including new test/core/retry-stress.slow.test.ts
(100 batches × 30% blip rate × decorrelated jitter, zero row loss)
- bunx tsc --noEmit: 0 errors
REVIEWS
=======
- CEO review (SELECTIVE EXPANSION): 4 cherry-picks proposed, 4 accepted
- Eng review (2 passes): 10 findings, 0 critical gaps, architectural
pivot from per-site to engine-level wrap
- Codex independent review: 23 findings; 10 critical/high absorbed
(decorrelated jitter, 12s backoff window, AbortSignal, idempotency
proof, backfill unification, typed audit-site enum, doctor expiry
thresholds, audit pruning, env validation at doctor startup)
PR #1523 closed and absorbed (@garrytan-agents original extract.ts fix
preserved via co-author trailer; 5 test cases moved to test/core/retry.test.ts
with assertions adjusted for the v0.41.19.0 BULK_RETRY_OPTS defaults).
Co-authored-by: garrytan-agents <noreply@anthropic.com>
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cd8efee0ea |
v0.41.15.0 feat(sync): --timeout + --max-age + partial status (closes #1472 RFC) (#1506)
* feat(sync): migration v98 last_refreshed_at + deleteLockRowIfStale helper Schema foundation for v0.41.15.0's `gbrain sync --break-lock --max-age <s>` flag. Adds `gbrain_cycle_locks.last_refreshed_at TIMESTAMPTZ` as the heartbeat signal that distinguishes wedged-but-alive lock holders from healthy long-running syncs that are actively refreshing. Why last_refreshed_at not acquired_at: `withRefreshingLock` already bumps `ttl_expires_at` every ~5 min while work runs, but leaves `acquired_at` at the original timestamp. A 35-min media-corpus sync that's healthy has `acquired_at` 35 min ago but `last_refreshed_at` 30 seconds ago. Using acquired_at for --max-age would steal healthy locks; last_refreshed_at correctly identifies only holders whose JS interval has stopped firing. D-V4-1 rollout safety: migration v98 backfills `last_refreshed_at = NOW()` (NOT `= acquired_at`) so pre-upgrade holders running the old binary get a 30-min protection window. After that window all pre-upgrade syncs are either complete (lock released) OR genuinely wedged (--max-age does the right thing). Documented as a known caveat in CHANGELOG. D-V4-mech-4 SQL cast: deleteLockRowIfStale uses `$N * INTERVAL '1 second'` not `$N::interval` (Postgres does not cast integer to interval the latter way). Atomic DELETE keyed on (id, holder_pid, last_refreshed_at < NOW() - $N * INTERVAL '1 second') RETURNING id, last_refreshed_at — no TOCTOU between inspect + delete. D-V4-mech-3 schema-snapshot parity: column added to all 3 snapshots so fresh init paths (pglite-schema.ts, schema.sql) initialize correctly without depending on the migration runner. schema-embedded.ts regenerated via `bun run build:schema`. Pinned by 13 PGLite cases in test/sync-break-lock-all.test.ts: tryAcquireDbLock writes on INSERT, withRefreshingLock refresh bumps both columns, inspectLock surfaces the new field, deleteLockRowIfStale refuses fresh / breaks stale / safe on holder_pid mismatch / refuses NULL (pre-v98). R1 + R6 regression invariants from the v4 plan. Closes #1472 (RFC from @garrytan-agents) — schema foundation only; performSync abort threading + CLI flags + consumer threading land in follow-up commits in this PR. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(sync): --timeout + --max-age + partial status + per-source AbortController The CLI surface for v0.41.15.0. Wires `gbrain sync --timeout <s>` (graceful self-termination) and `gbrain sync --break-lock --all --max-age <s>` (cron-self-heal) end-to-end through `performSync`, `runOne`, `runBreakLock`, and all `SyncResult.status` consumers. Surface 1: `gbrain sync --timeout <s>` - New `SyncOpts.signal?: AbortSignal` threads through `performSync` → `withRefreshingLock` work callback → `performSyncInner`. - D-V3-1 honest scope: abort checks fire ONLY in pre-bookmark phases (pull, delete, rename, import). Extract + embed run to completion if reached. The `last_commit` bookmark write at sync.ts:1261 is the invariant boundary — partial CANNOT advance the bookmark because the abort checkpoints sit strictly before that write. - D-V3-2 per-iteration: abort check at top of every loop iteration (delete, rename, serial import, each parallel worker's while loop) matches the per-file granularity the existing loops already have. - D-V3-3 per-source AbortController: `--timeout --all` creates ONE controller inside runOne per source so each gets its own budget; NOT a shared global controller (which would starve later sources). try/finally + timer.unref() guarantees cleanup on throw. - D-V4-mech-7 pull error.cause: pullRepo wraps execFileSync errors in GitOperationError. The catch inspects e.cause.code === 'ETIMEDOUT' and e.cause.signal === 'SIGTERM' (NOT the top-level error) to distinguish timeout (partial reason='pull_timeout') from ordinary pull failure (existing warn-and-continue, R2 invariant preserved). Surface 2: `gbrain sync --break-lock [--all] [--max-age <s>]` - Drops the --all refusal at sync.ts:1610. When combined with --all, runBreakLock iterates every active source and prints per-source verdict. - --max-age routes through the new deleteLockRowIfStale helper from db-lock.ts (atomic age-gated DELETE; no TOCTOU). Healthy refreshing holders survive by construction; only wedged-but-alive holders trip. D-V3-5 partial-status consumer threading (conservative posture matching blocked_by_failures): - printSyncResult: new `case 'partial':` arm reports filesImported + reason; tells operator to re-run to continue. - manageGitignore (both single-source and parallel runOne sites, plus watch mode): excludes partial from the gate. A partial sync's db_only path set isn't fully reconciled. - Auto-embed-backfill enqueue inside runOne: excludes partial. The next clean sync will re-walk and re-decide. CLI flag parsing (T16): - parseDurationSeconds in sync-concurrency.ts: accepts 60s/10m/1h/bare int; rejects 0/negatives/decimals/garbage. Names the failing flag in the error message. - --timeout requires --source OR --all (validation rejects bare `gbrain sync --timeout`). - --max-age requires --break-lock; mutually exclusive with --force-break-lock. Coverage: - 15 unit cases (test/sync-timeout.test.ts) pin parseDurationSeconds + SyncResult union additivity. - 2 E2E cases (test/e2e/sync-parallel.test.ts) pin the abort-mid-import contract against real Postgres: status='partial', last_commit unchanged, filesImported bounded. Closes #1472 (RFC from @garrytan-agents) — CLI surface; schema foundation landed in the previous commit. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test(heavy): sync_timeout_rescue.sh reproducer for the cron-cascade 10K-page seed × 4 sources × deliberately tight --timeout × 3 sequential cron emulations. Asserts every source reaches `last_commit === HEAD` within 3 waves. Proves the v0.41.15.0 fix breaks the cascade the PR #1472 RFC documented. Workload (tests/heavy/_sync_timeout_rescue_workload.ts) is PGLite-only because the PGLite engine forces serial sync internally (parallelEligible excludes it). The parallel-fan-out + per-source AbortController case lives in test/e2e/sync-parallel.test.ts against real Postgres. This heavy test pins the contract that matters for cron: aborts → partial returns → next wave content_hash-short-circuits + makes new progress. Smoke-tested locally at PAGES=50 WAVES=2 TIMEOUT_SECONDS=2: every source converges within 2 waves. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(v0.41.15.0): CHANGELOG + README + TODOS + version bump Bumps VERSION + package.json to 0.41.15.0 (next slot after master's v0.41.14.0). CHANGELOG entry leads ELI10 per gstack voice rules and documents the 3 intentional honest gaps: 1. --timeout covers pull + delete + rename + import only; extract + embed run to completion (D-V3-1 honest scope). 2. First 30 min after migration v98, --max-age cannot identify wedged pre-upgrade holders (D-V4-1 rollout trade-off). 3. Full-sync triggers (first sync, --full, chunker-version rewalk) don't respect --timeout yet (deferred to v0.42+). README troubleshooting section: paste-ready cron pattern with shell timeout(1) for OS-level process isolation + gbrain's --timeout for graceful self-termination half-a-minute earlier. TODOS.md: v0.42+ entries for subprocess fan-out (revisit if shell timeout(1) proves insufficient), full-sync --timeout coverage via AbortSignal in runImport, and runFactsBackstop microtask-queue process-alive caveat. llms-full.txt regenerated via `bun run build:llms`. Closes #1472 (RFC from @garrytan-agents). Credit to @garrytan-agents in the CHANGELOG for surfacing the production cron-failure data that motivated the work. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix(test-isolation): rewrite JSDoc to not match mock.module() lint regex scripts/check-test-isolation.sh greps for the literal string `mock.module(` to flag top-level module mocks (R2 rule — top-level mocks leak across files in the shard process). The regex doesn't know about comments, so my two new test files tripped the lint with JSDoc lines literally describing the rule: test/sync-timeout.test.ts:11 "* `mock.module()` (R2). Engine ..." test/sync-break-lock-all.test.ts:15 "* mock.module(), no process.env ..." Both files had ZERO actual mock.module() calls — only the comment text matched. Rewrote both JSDocs to refer to "top-level module mocks" instead of the literal token. Same meaning; doesn't trip the regex. `bun run check:test-isolation` now passes (714 non-serial unit files scanned). `bun run verify` clean (22/22 checks pass). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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dab441f59f |
v0.41.4.0 wave: local providers + cross-platform stdin + gateway-routed dream judge (6 community PRs) (#1377)
* fix(cli): use fd 0 instead of '/dev/stdin' for cross-platform stdin reads
`readFileSync('/dev/stdin', 'utf-8')` works on Unix but fails on Windows
(Git Bash, PowerShell, cmd) with `ENOENT: no such file or directory,
open '/dev/stdin'`. Windows doesn't expose `/dev/stdin` as a filesystem
path.
Reading file descriptor 0 directly (`readFileSync(0, 'utf-8')`) is the
documented Node.js idiom and works on every platform. No behavior change
on Unix — same syscall path, same semantics.
Repro on Windows before the fix:
echo "test" | gbrain put my-page
ENOENT: no such file or directory, open '/dev/stdin'
After: round-trip put/search/delete works on Windows Git Bash.
* v0.40.6.1 feat: llama-server reranker — local Qwen3 / self-hosted ZE via llama.cpp
Adds local reranker support so users can point gbrain's reranker call at their
own llama.cpp server instead of ZeroEntropy's hosted API. One new recipe
(`llama-server-reranker`), a `path?: string` + `default_timeout_ms?: number`
extension on `RerankerTouchpoint`, env passthrough wiring, budget-tracker
`FREE_LOCAL_RERANK_PROVIDERS` set so `--max-cost` callers don't TX2 hard-fail on
local rerank, and a doctor-probe divergence fix (probe and live search now read
the same `search.reranker.model` path via `loadSearchModeConfig` + `resolveSearchMode`).
ZE-hosted users are unchanged. Voyage / Cohere / vLLM rerankers stay out of
scope — different wire shapes need adapter hooks designed against their actual
shapes in a follow-up plan.
Verification:
- `bun run verify` (typecheck + 13 pre-checks): clean
- `bun run check:all` (15 historical checks): clean
- 107/107 expect() calls pass across 5 affected test files
- /codex review against the full diff: GATE PASS (caught one [P2] /v1 path
doubling bug pre-merge; fixed by changing recipe path to leaf `/rerank`)
- Claude adversarial subagent: 7 net-new findings filed as v0.40.7+ TODOs
(none currently exploitable; hardening for future contributor traps)
Test surface (107 cases, 5 files):
- test/ai/rerank.test.ts: path override (exact URL match), default_timeout_ms
honored, empty models[] accepts any id, ZE regression
- test/ai/recipe-llama-server-reranker.test.ts: recipe shape regression guard
+ base_url + path concat assertion (codex-caught /v1/v1/ regression)
- test/search-mode.test.ts: timeout precedence chain (per-call > config >
recipe > bundle), ZE no-recipe-default regression, unknown provider fallthrough
- test/models-doctor-reranker.test.ts: divergence-fix helper across DB-plane
read, mode default, disabled, override, DB-error graceful fallback
- test/core/budget/budget-tracker.test.ts: free-local rerank pricing + arbitrary
model id + chat-kind TX2 hard-fail preserved
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* docs: post-ship documentation sync
* docs: index docs/ai-providers/ in llms.txt (zeroentropy + llama-server-reranker)
The hand-curated llms-config.ts doc map never included docs/ai-providers/, so
both zeroentropy.md (since v0.35.0.0) and the new llama-server-reranker.md were
invisible to the AI-facing llms.txt / llms-full.txt index. Adds an "AI providers"
section with both. Marked includeInFull: false (setup walkthroughs belong in the
index but would push the single-fetch bundle past FULL_SIZE_BUDGET) — same
treatment CHANGELOG.md gets.
Caught by the /ship document-release subagent.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* fix: recipe-aware embedding-provider check for local providers
doctor --remediation-plan and autopilot both judged the embedding
provider with a hosted-only key check, so a brain on ollama: or
llama-server: was reported "blocked" on a missing API key it never
needed, contradicting doctor --json's 100%-coverage health.
Extract a shared embeddingProviderConfigured() helper into
brain-score-recommendations.ts: empty auth_env.required (local
providers) is configured with no key; hosted providers check their
OWN required key. Both producers (doctor, autopilot) call it,
killing the DRY violation that caused the bug. Hosted brains with a
missing key still block.
* fix(budget): price local embed providers at $0
A --max-cost-bounded embed/reindex job configured for ollama: or
llama-server: TX2 hard-failed with no_pricing because
lookupEmbeddingPrice has no entry for local models. Add
FREE_LOCAL_EMBED_PROVIDERS (sibling to FREE_LOCAL_RERANK_PROVIDERS)
so a pricing miss on a local-inference provider returns $0 instead
of null. lmstudio/litellm intentionally excluded.
* feat(models): embedding reachability probe in gbrain models doctor
A down/misconfigured local embed server was invisible until first
embed. Add probeEmbeddingReachability() (mirrors the reranker probe):
a 1-input embed with a 5s abort timeout, classified via classifyError,
under a new 'embedding_reachability' touchpoint, gated on the
zero-network config probe returning ok first.
* fix: don't count config-plane voyage/google keys as configured
codex review caught a false positive: HOSTED_EMBED_KEY_CONFIG mapped
VOYAGE_API_KEY/GOOGLE_GENERATIVE_AI_API_KEY to config fields, but
buildGatewayConfig only threads openai/anthropic/zeroentropy config
keys into the gateway env. A Voyage/Google brain with the key only in
config.json would be judged "configured" and dispatch an embed.stale
job that then fails auth at the gateway. Drop those two from the map so
the producer closures resolve them by env var only, matching what the
gateway can actually use. Pinned by a regression test.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* feat(dream): route significance judge through gateway.chat for multi-provider support
Replaces the hardcoded `new Anthropic()` client in the dream-cycle synthesize
phase with a gateway-routed JudgeClient adapter. Mirrors the v0.35.5.0 pattern
that closed #952 for runThink: construction-time provider/key probe returns null
on a clear miss (cheap pre-flight); the verdict loop wraps the chat call in
try/catch for AIConfigError mid-run.
Any provider with a registered gateway recipe (Anthropic, DeepSeek, OpenRouter,
Voyage, Ollama, llama-server, etc.) is now reachable via:
gbrain config set models.dream.synthesize_verdict <provider>:<model>
The canonical config key `models.dream.synthesize_verdict` (per PER_TASK_KEYS
in src/core/model-config.ts) is used unchanged. The exported JudgeClient
interface signature is preserved for test-seam stability.
The original community PR (#1349) shipped a custom fetch adapter that
bypassed the gateway entirely. This reworked landing routes through the
canonical seam so future provider additions automatically benefit, and a
CI guard (T7) will land in this wave to prevent the bug class from
re-opening (the same one that bit src/core/think/index.ts before v0.35.5.0).
Co-Authored-By: justemu <206393437+justemu@users.noreply.github.com>
* test(dream): synthesize-gateway-adapter unit tests + R3 parsed-verdict parity
11 cases pin the gateway-routed JudgeClient adapter from T5:
- A1: makeJudgeClient returns null on missing Anthropic key (legacy short-circuit preserved)
- A2: returns a JudgeClient when chat provider is reachable
- A3: JudgeClient.create routes through gateway.chat (via __setChatTransportForTests)
- A4: ChatResult.text → Anthropic.Message.content[0].text mapping
- A5: empty text from gateway → graceful empty-text Anthropic.Message
- A6: non-AIConfigError from gateway propagates to caller (no swallow)
- A7: AIConfigError from gateway propagates as AIConfigError (caught per-transcript in production loop)
- A8: makeJudgeClient returns null on unknown provider prefix
- A9: returns a JudgeClient for non-anthropic providers without env-probing (delegates to gateway at call time)
- R3: parsed-verdict SEMANTIC parity — gateway-routed and legacy SDK-shape JudgeClients produce same {worth_processing, reasons} given identical canned LLM text
- R3 corollary: unparseable LLM output → both paths fall through to cheap-fallback verdict
Codex flagged byte-identical-Anthropic.Message as a meaningless gate; R3 is
parsed-verdict semantic parity instead. Mirror pattern of
test/think-gateway-adapter.test.ts for cross-site consistency with the
v0.35.5.0 runThink migration.
* ci: guard against direct Anthropic SDK construction in gateway-routed files
New scripts/check-gateway-routed-no-direct-anthropic.sh greps two guarded
files (src/core/cycle/synthesize.ts and src/core/think/index.ts) for
`new Anthropic()` constructor calls and runtime imports of @anthropic-ai/sdk.
Type-only imports (`import type Anthropic from '@anthropic-ai/sdk'`) stay
allowed because both files use Anthropic.Message / .MessageCreateParamsNonStreaming
as adapter types.
Comment lines (starting with `//` or ` *`) are excluded so historical
references in JSDoc don't false-fire. Negative test in this commit's
verification confirms: injecting `new Anthropic()` into synthesize.ts
makes the guard exit 1 with a clear error pointing at the gateway adapter
pattern; reverting restores the OK state.
Wired into both `bun run verify` and `bun run check:all`. Closes the bug
class that bit synthesize.ts in PR #1349 (which would have shipped a
parallel fetch stack instead of routing through the canonical gateway).
The same class previously bit think/index.ts and was fixed structurally
in v0.35.5.0; this guard prevents either file from regressing.
Extend GUARDED_FILES in the script when migrating another file off
direct SDK construction.
* docs(put_page): point Windows / pipe-buffer users at gbrain capture --file
Extends the put_page op description (surfaced by `gbrain put --help`) with a
one-line pointer to `gbrain capture --file PATH --slug SLUG` for the file-
as-input use case. Capture (v0.39.3.0) is the canonical Windows-pipe-buffer
escape route: reads files as a Buffer first, scans the first 8KB for NUL bytes
to refuse binary content, decodes to UTF-8 only after the safety check, and
adds provenance write-through.
Lands the user-facing value the closed PR #1365 was reaching for, without
duplicating the CLI surface. Credits the original contributor.
Co-Authored-By: ecat2010 <90021101+ecat2010@users.noreply.github.com>
* test: R1+R2+R4 critical regression pins for the community-PR-wave landing
Per the wave's eng-review plan (IRON RULE — mandatory):
R1 — get_page handler accepts calls without `content` param. Pre-wave
PR #1365 landed its `!p.content → throw` check in the WRONG handler
(get_page instead of put_page), which would have broken every read
in the system. Pin: get_page MUST NOT require content + the schema
carries no `content` or `file` param.
R2 — put_page schema content stays `required: true`. PR #1365 also
flipped `content` from required→optional in the schema. Pin: the
contract stays at `required: true` + the closed PR's `file` param
is NOT in the schema.
R4 — Cross-platform stdin via fd 0 (PR #1325 regression pin). Source-grep
asserts src/cli.ts uses `readFileSync(0, ...)` and NOT the legacy
`readFileSync('/dev/stdin', ...)`. Belt-and-suspenders pattern
assertions confirm the parseOpArgs branch shape (cliHints.stdin
check, 5MB cap, isTTY gate) hasn't drifted.
R3 (gateway-adapter parsed-verdict parity) lives in the sibling file
test/cycle/synthesize-gateway-adapter.test.ts.
* test(e2e): update dream-synthesize no-key reason text + harden hermeticity
After T5's gateway-adapter rework, the "no API key" verdict text changed from
'no ANTHROPIC_API_KEY for significance judge' to
'no configured provider for verdict model: <model>' (broader + names the
actual model so the user sees WHICH provider failed). Update both assertions
that check the old text.
Hermeticity bug fix in the same commit: `withoutAnthropicKey` previously only
cleared the env var. After the rework, `makeJudgeClient` ALSO checks
`loadConfig().anthropic_api_key` (same hasAnthropicKey() pattern think/index.ts
uses since v0.35.5.0). If the developer running the test has the key set in
~/.gbrain/config.json, the test would behave non-deterministically. Fix:
override GBRAIN_HOME to a fresh tmpdir for the duration of the body, restore
on return (even on throw).
* test(e2e): pin verdict-loop AIConfigError catch from T5 rework end-to-end
Drives runPhaseSynthesize against a real PGLite engine with the gateway
chat transport stubbed to throw AIConfigError on every call (simulates a
revoked/misconfigured provider surfacing mid-run). Asserts:
- Phase does NOT crash; converts the throw to a per-transcript verdict
with worth=false and reasons[0] matching "gateway error: ...".
- status='ok' so subsequent transcripts in the loop would continue
being judged (not visible in 1-transcript test, but the loop shape is
proven not to abort).
Pre-rework (T5), this code path didn't exist — judgeSignificance threw
directly to runPhaseSynthesize and crashed the whole phase. Pin so a
future regression that removes the try/catch fires loudly.
* docs(claude.md): annotate v0.41+ community-PR-wave changes
Two additions to the Key files section:
- src/core/cycle/synthesize.ts — appends a v0.41+ paragraph documenting
the gateway-adapter rework (makeJudgeClient + AIConfigError catch loop +
canonical config key + JudgeClient interface preserved + CI guard
reference + test file references).
- scripts/check-gateway-routed-no-direct-anthropic.sh — new entry
documenting the CI guard's contract, scope, and how to extend
GUARDED_FILES when migrating another file off direct SDK construction.
CLAUDE.md drives /sync-gbrain and llms.txt generation; both need the
wave's annotations to land BEFORE the llms regeneration step (T10).
* docs(llms): regenerate llms.txt + llms-full.txt for v0.41+ wave
Refreshes the auto-generated llms.txt bundles to pick up the CLAUDE.md
annotations landed earlier in this wave (gateway-adapter synthesize.ts
+ check-gateway-routed-no-direct-anthropic.sh + the cherry-picked
llama-server-reranker recipe). Pinned by test/build-llms.test.ts.
* fix(providers): dynamic-width id column accommodates llama-server-reranker
v0.40.6.1 introduced `llama-server-reranker` (21 chars), which overflowed
formatRecipeTable's static 14-char PROVIDER column. When the id is longer
than the column, padEnd is a no-op — the row starts with the tier name
directly, no space delimiter. test/providers.test.ts 'each recipe appears
at most once' iterates every recipe and asserts at least one row starts
with `${id} ` or `${id} `; with no space after `llama-server-reranker`,
the assertion fails and the recipe appears effectively missing from the
human-readable list.
Fix: compute column width dynamically as `max(14, max(id.length) + 1)` so
every id is followed by at least one space, regardless of length. Also
widens the separator rule to match. 14 stays as the floor so the existing
short-id rows (openai 6, ollama 6, anthropic 9, ...) keep their familiar
layout when llama-server-reranker isn't in the active recipe set.
10/10 cases in test/providers.test.ts pass after the fix.
* chore: pre-landing review polish — refresh models doctor tip + file embed timeout TODO
Two pre-landing review absorptions:
- `src/commands/models.ts:154` — the help-text tip said `gbrain models doctor`
"spends ~1 token per model" but the wave added an `embed(['probe'])` call
AND a reranker probe. Generalize to "spends a minimal request per configured
chat/embed/rerank surface" so the cost expectation matches reality.
- `TODOS.md` — file a follow-up to widen `default_timeout_ms` from
RerankerTouchpoint to EmbeddingTouchpoint so `probeEmbeddingReachability`
doesn't hardcode 5000ms while the sibling reranker probe reads the
recipe's configured timeout. Local CPU embedding endpoints (llama-server)
hit the same cold-start curve as Qwen3-Reranker-4B; workaround today is
"re-run the probe" per the existing JSDoc.
Other informational findings from pre-landing review either match
established patterns (no behavioral test for `probeEmbeddingReachability`,
matching `probeRerankerReachability`), are intentional choices documented
in JSDoc (the `as unknown as Anthropic.Message` cast), or are micro-perf
in non-hot paths (autopilot's 4 sequential `getConfig` awaits per
5-minute tick). All non-blocking.
* ci: tighten gateway-routed guard against import bypass shapes + honest JSDoc
Adversarial review caught two soft spots in the wave's new contracts:
1. `scripts/check-gateway-routed-no-direct-anthropic.sh` only matched the
default-import shape `import Anthropic from '@anthropic-ai/sdk'`. A future
contributor (or, more realistically, a future refactor) could bypass with:
- `import { Anthropic } from '@anthropic-ai/sdk'`
- `import { Anthropic as A } from '@anthropic-ai/sdk'`
- `import * as Anthropic from '@anthropic-ai/sdk'`
- `const x = await import('@anthropic-ai/sdk')`
Tightened the regex to match ANY value-shaped import from the SDK module
(excluding only the explicit `import type ... from '@anthropic-ai/sdk'`
form which the adapter's Anthropic.Message return type needs). Added a
second grep for dynamic imports. Verified all four bypass shapes now
trigger the guard against synthesize.ts; type-only import still passes.
2. `synthesize.ts:makeJudgeClient` JSDoc claimed the adapter "tolerates the
array-of-blocks shape for future flexibility" — but the mapping flattens
ONLY text blocks; `tool_use`, `tool_result`, image blocks silently
become empty strings. Today only `judgeSignificance` calls this and it
only sends string content, so no behavior bug. But the comment was
marketing future flexibility the code doesn't deliver. Narrowed to call
out the silent-drop and say to extend the mapping if a future caller
wires non-text content through.
Both wave-scope: the CI guard was added by the wave, the JSDoc was added
by the wave's T5 rework. Adversarial review caught them before merge.
* fix(models doctor): reranker probe timeout matches live search precedence chain
Codex Pass-9 adversarial review caught a probe-vs-production divergence:
production `hybridSearch` resolves reranker timeout via the full chain
(per-call > config > recipe > bundle) by going through
`loadSearchModeConfig + resolveSearchMode`, but `probeRerankerReachability`
was reading ONLY the recipe's `default_timeout_ms` — so an operator who
set `search.reranker.timeout_ms=1000` would see doctor wait 30s and report
"reachable" while production search timed out at 1s and fail-opened.
A higher configured timeout produces the opposite false failure (probe
gives up at 5s when production would have waited longer).
Fix: extract `resolveLiveRerankerTimeoutMs(engine)` parallel to the
existing `resolveLiveRerankerModel(engine)` — same precedence chain,
same DB-plane consistency posture. The probe now reads the SAME timeout
live search reads, on the same lookup path.
The codex P1 finding about `FREE_LOCAL_*_PROVIDERS` zero-pricing being
bypassable via redirected `LLAMA_SERVER_BASE_URL` is filed as a TODO under
community-pr-wave follow-ups — couples with the existing
FREE_LOCAL_PROVIDERS unification TODO so both close in one v0.41+ PR.
* ci(guard): handle mixed type+value imports + macOS BSD sed POSIX classes
Codex structured review [P3] caught a bypass in the freshly-tightened
gateway-routed guard:
import { type Message, Anthropic } from '@anthropic-ai/sdk';
new Anthropic();
The previous regex `^\s*import\s+[^t][^y]*from ...` was meant to exclude
`import type ...` but stops at the `y` in `type` inside the brace list,
silently allowing the value-import `Anthropic` through. Two fixes:
1. Replace the brittle regex-based type-exclusion with a clause-level
parse: extract the brace-list specifiers, allow the import iff EVERY
non-empty specifier is `type`-prefixed. Catches mixed-import bypasses
(`{ type Foo, Bar }`) while keeping all-type braces (`{ type Foo, type Bar }`)
passing. Default + namespace imports remain always-value-shaped.
2. Replace `\s` with POSIX `[[:space:]]` in the sed extract — macOS BSD sed
doesn't honor `\s` in extended-regex mode (it silently no-ops the pattern
so `specifiers` comes back empty and the script falls through to the
default/namespace branch's wrong error message).
Hermetic 7-shape regression matrix now verifies every TypeScript import
shape against the expected ALLOW/BLOCK verdict; all 7 pass:
- ALLOW: `import type Anthropic from '...'`
- ALLOW: `import type { Foo } from '...'`
- ALLOW: `import { type Message, type Foo } from '...'`
- BLOCK: `import { type Message, Anthropic } from '...'`
- BLOCK: `import { Anthropic } from '...'`
- BLOCK: `import Anthropic from '...'`
- BLOCK: `import * as A from '...'`
Subshell-trap fix in the same commit: the previous "exit 1 inside while-pipe"
pattern doesn't propagate to the outer `$?` because the pipe spawns a
subshell. Switched to a tmpfile-flagged sentinel so the verdict survives
the subshell boundary cleanly.
* chore: bump version and changelog (v0.41.4.0)
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* fix(audit-writer): route log() to file matching event ts, not real-now
CI failure surfaced a time-dependent test flake in
`test/audit/audit-writer.test.ts` "returns events from current week,
filtered by ts cutoff" (added in v0.40.4.0 PR #1300). The test pinned
synthetic `now = 2026-05-22T12:00:00Z` (ISO week 21), logged 3 events
with synthetic ts values, then called `readRecent(7, now)` expecting
to find 2 events in window.
Root cause: `log()` ignored the caller-supplied `ts` for filename
routing and ALWAYS wrote to the file matching real-time-now's ISO
week. When real CI time crossed into 2026-W22 (this Monday), the
events went to W22's file but `readRecent` walked W21 + W20 → 0 hits.
Fix:
- `log()` parses `event.ts` (when provided) and routes to the file
matching that ts's ISO week. Falls back to real-now when ts is
missing or unparseable.
- No behavior change for production callers — none of the 5 audit
consumers pass `ts` explicitly (rerank-audit, audit-slug-fallback,
content-sanity-audit, graph-signals, supervisor-audit). The writer
stamps real-now → both ts and filename use real-now → same file
as before.
- Sibling test "honors caller-supplied ts override" also pinned a
fixed ts and would have broken from the opposite angle (test
read from `computeFilename()` default = real-now). Updated to
read from `computeFilename(new Date(fixedTs))` so it asserts the
per-row file routing the wave now provides.
22/22 audit-writer cases pass. Production callers (5 sites) unchanged.
Pre-existing on master since v0.40.4.0; surfaced when real time
crossed into a different ISO week than the test's synthetic now.
NOT introduced by this PR (#1377 community-PR-wave) — audit-writer
files aren't touched by the wave.
---------
Co-authored-by: Tobias <34135750+tobbecokta@users.noreply.github.com>
Co-authored-by: kohai-ut <chris@tincreek.com>
Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com>
Co-authored-by: justemu <noreply@github.com>
Co-authored-by: justemu <206393437+justemu@users.noreply.github.com>
Co-authored-by: ecat2010 <90021101+ecat2010@users.noreply.github.com>
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af5ee1eb5a |
v0.40.8.1 docs: README rewrite + personal-brain + company-brain tutorials (#1345)
* docs: rewrite README lead around search-vs-think differentiator The current README opened with a generic "smart but forgetful" tagline that buried the actual differentiator. Garry's 2026-05-23 X thread crystallized the positioning: "Search gives you raw pages. Think gives you the answer." That plus graph traversal plus gap analysis is what nobody else ships in one box. Changes: - README lead now leads with the search-vs-think frame, the "nobody else does this" claim, and the "strategic moat / so you don't lose context" framing. - Collapsed five stacked "New in vX.Y.Z" paragraphs in the lead into one Recent Releases section after the install path, freeing the first viewport to be about what gbrain IS, not what shipped last week. - New ## Search vs think section with side-by-side CLI example, gap-analysis explanation, and the find_trajectory + think compounding story. - ORIGIN.md closing paragraph names think as the reason the brain is worth building. - No em dashes used as connectors (per humanizer rules). - All factual claims (page counts, benchmark numbers, version references) preserved verbatim. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: add v0.40.6.0 to README Recent Releases Picked up sync --all + per-source locks + sources status dashboard from the v0.40.6.0 merge. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): add visceral "what this looks like" before/after table Pulled verbatim from BrainBench Cat 29 — same question, same brain, Haiku judge. Shows what a typical personal-knowledge brain (top-K vector retrieval, what MemPalace / Mem0 / Hindsight ship) returns vs what gbrain think returns. Search hallucinates three people who actually work at OTHER companies; think correctly identifies what's known + flags the gap. Score: search 1/10 vs think 9/10. The before/after lands above Install so the reader sees concrete differentiation before they decide to install. Backs the abstract "search vs think" claim from the lead with a real receipt. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): swap before/after example to verbatim Cat 29 receipt (Q2 ARR) Per @garrytan — the prior example used the synthetic Q1 (employees of Horizon TECH 6) with paraphrased answer text. Replaced with the verbatim Cat 29 Q2 receipt: actual question (with the in-question typo that exists in the eval), actual truncated search-answer text from the JSON receipt, actual think-answer text with all three ARR readings + citations, and the actual Haiku judge verdicts pasted verbatim. Also strips Mem0 + Hindsight references from the comparator phrasing — Mem0 is a YC company we don't want to single out, and Hindsight was a hackathon-stage project that never launched. The comparison phrasing now reads "MemPalace and most peer AI-memory stacks" — accurate without naming systems we shouldn't be benchmarking against. The three things gbrain think did that a typical top-K retrieval cannot are listed below the table for readers who want the takeaway in plain English: 1. Caught the name typo (question said "Acme AI 0", brain has "Acme CO 0") 2. Walked the typed-claim Facts fence to build a chronological trajectory 3. Cited every claim Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): add "Your brain's shape (schema packs)" section Per @garrytan — the README had nothing on schema packs (v0.38/v0.39 dynamic-schema cathedral). New section lands between "How to get data in" and "Recent releases" so the narrative flow reads: what gbrain is → concrete example → install → query (search vs think) → get data in → schema packs (how the brain understands your shape) → recent releases → loop → capabilities → ... The section opens by naming the differentiator out loud: "Most personal- knowledge tools force one fixed layout: their idea of notes + people + tags. Drop a Notion export or your own years-old Obsidian vault and the agent doesn't know what your folders mean." Three options surfaced: - gbrain-base (default, zero-config Garry layout) - gbrain-recommended (extends base with 13 more dirs) - your own pack via the schema detect → suggest → review-candidates three-command magical moment Six representative CLI verbs shown verbatim. Closes with one paragraph explaining the threading through every read/write path (parseMarkdown, whoknows, extract_facts, search cache) and a one-line summary of the 7-tier resolution chain pointing at docs/architecture/schema-packs.md for the full reference. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): de-brand "Think" in the lead; reframe as GBrain's brain layer Per @garrytan — "we don't need to brand it Think, we want to say the think command later but we don't lead on it!" Changes: - Lead sentence: "Search gives you raw pages. Think gives you the answer" → "Search gives you raw pages. GBrain gives you the answer, through a brain layer." The product is GBrain; think is the CLI verb that runs the brain layer, introduced later. - Two-bullet differentiator list: the "gbrain think" bullet now leads with the capability ("A synthesis layer that gives you the actual answer.") rather than the CLI command. The bullet body still names what the layer does (synthesized prose, citations, gap analysis). - Strategic-moat paragraph: "`gbrain think` is what makes the moat usable" → "The brain layer is what makes the moat usable." - "What this looks like" table header: "GBrain `think`" → "GBrain's brain layer (one synthesized answer, run via `gbrain think`)". CLI command stays in the cell so the example is reproducible; the framing leads with what it IS, not the verb. - Three-bullet takeaway under the table: "Three things `gbrain think` did" → "Three things the brain layer did". Aggregate sentence: "gbrain think averages 5.60/10" → "GBrain's synthesis layer averages 5.60/10". - Section heading: "## Search vs think" → "## Two ways to query your brain". The section still introduces `gbrain search` and `gbrain think` as the two CLI verbs side by side; the heading no longer brands "think" as the thing. The "think command" comes through naturally where it appears as a CLI example. The PRODUCT is GBrain. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): switch to first-person voice (Garry speaking directly) Per @garrytan — drop "Built by..." third-person framing and write in first person. Edits: - Lead credibility paragraph: "Built by the President and CEO of Y Combinator to run his actual AI agents" → "I'm Garry Tan, President and CEO of Y Combinator. I built GBrain to run my own AI agents." Subsequent sentences switch "his deployments" → "my deployments", "the agent ingests... you wake up smarter" → "my agent ingests... I wake up smarter — and so will you" (the closing "and so will you" connects Garry's experience to the reader's). - Compounding paragraph: "As Garry's personal agent gets smarter, so does yours" → "As my personal agent gets smarter, so does yours." - Schema packs section: "the layout used by Garry's production brain" → "the layout my production brain uses". - License + credit: "Built by Garry Tan to run his OpenClaw and Hermes deployments — the production brain behind his actual AI agents" → "I built GBrain to run my OpenClaw and Hermes deployments — the production brain behind my AI agents." The whole top of the README now reads as Garry talking directly to the reader about what he built and why. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): DRY the lead — drop redundant "through a brain layer" + repeat GBrain "GBrain gives you the answer, through a brain layer. GBrain is the brain layer your AI agent has been missing..." — two GBrains, two brain layers. Tightened to: "GBrain gives you the answer. It's the brain layer your AI agent has been missing — the only one that does synthesis, graph traversal, and gap analysis in one box." Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): frame GBrain as a company brain too, link to YC RFS Per @garrytan — GBrain is now usable as a company brain (federated sync, OAuth scoping, Cat 22 source isolation), and YC just put company-brain on its Request for Startups. Added a paragraph after the personal-brain lead that names the three v0.34+ features that make multi-user safe (federated sync, per-source OAuth scoping, the Cat 22 leak-free source isolation), then links to https://www.ycombinator.com/rfs#company-brain with a one-line pitch: "if you're building in that space, you might as well build on this." The framing carries forward the personal-brain story while opening the aperture: GBrain works for one person (Garry's production deployment) AND for a team (per the features Cat 22 just verified). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): rewrite company-brain paragraph in plain English @garrytan caught me writing internal eval-suite jargon ("Cat 22 proves source isolation is leak-free across hybrid search, listPages, getPage, and federated reads") in a paragraph aimed at someone deciding whether to use GBrain. Rewritten in plain English: "Each person on the team gets their own slice of the brain, scoped by login. When you query, you only see what you're allowed to see — never another person's notes, never another team's data. We fuzz- tested this across every way you can read the brain (search, list, lookup, multi-source reads) and got zero leaks." Same factual content, zero internal vocabulary. The "Cat 22" name belongs in the benchmark page, not the front-door README. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(tutorials): add company-brain tutorial (Diataxis tutorial quadrant) End-to-end walkthrough for setting up GBrain as a multi-user company brain. Audience: founder / CTO / head of ops at a 10-50 person company who has heard about GBrain (from the YC RFS company-brain page or my tweets) and wants to set it up as their team's shared institutional memory. ~3700 words, written for a learner with zero prior gbrain knowledge. Twelve parts walk the reader from "I've never run gbrain" to "three teammates each query the brain through their own AI agent and see the correctly scoped answer": 1. The mental model (personal brain vs company brain, federated sources, OAuth scoping, what you get) 2. Prerequisites table (Postgres, embedding key, Anthropic key, git repo, Bun, host machine + cost projection) 3. Install + Postgres + API keys + doctor verify 4. Create three sources (shared / customers / internal) + sync 5. Spin up HTTP MCP server with --bind 0.0.0.0 + --public-url 6. Register one OAuth client per teammate with --source + --federated-read 7. Verify scoping works (alice can't see internal, bob can't see customers) 8. Connect each teammate's AI agent via thin-client install 9. First real `gbrain think` query showing sourced + synthesized + gap-analysis answer 10. Operating the brain (autopilot, doctor --remediate, sources status, admin dashboard) 11. Cost + speed expectations from the v0.40.6.0 benchmark 12. Common gotchas + troubleshooting Voice: - First-person Garry in intro / motivation paragraphs - Zero internal jargon. No "Cat 22", "P@5", "knobsHash", "RRF", "MRR" - Plain English throughout - No em dashes used as connectors (zero in final draft) - "Brain layer" / "synthesized answer" framing, not "Think" branding - No Hindsight, no Mem0 (per repeated session feedback) - Every example uses placeholder names (alice-example, bob-example, acme-co) Cross-linked from: - README.md company-brain paragraph - docs/INSTALL.md (under the migrate --to supabase block) - docs/architecture/topologies.md (See also section) Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): drop version chatter, add Tutorials section, expand tutorial roadmap Per @garrytan: the README should read as the current docs written for people who have never known GBrain before. Versions are what the CHANGELOG is for. Version-chatter sweep across the README: - Killed the entire ## Recent releases section. That's a changelog summary, not docs. CHANGELOG.md owns it. - Stripped "(v0.38+)" from the ## How to get data in heading. - Rewrote "(the v0.38 put_page write-through plumbing)" as "(the database and on disk in one move)" — describes WHAT happens, not WHEN it shipped. - Stripped "(The legacy gbrain skillpack install managed-block model was retired in v0.36.0.0; run gbrain skillpack migrate-fence once if you're upgrading from an older release.)" from the skillpack paragraph. Upgrade history goes in the CHANGELOG. - Stripped "New in v0.40.4.0:" from the hybrid-search graph-signals description. Just describes what the feature does. - Stripped "As of v0.37," from the embedding-provider auto-detect paragraph in the Troubleshooting section. - Stripped "the embedding + reranker stack that became the v0.36.2.0 default" → "ships as the default" in the License + credit section. - Stripped "in Cat 29" from the synthesis-benchmark sentence (same internal-jargon class as Cat 22 which @garrytan called out earlier). Replaced ## Recent releases with ## Tutorials: - Links to the one shipped tutorial (company-brain.md) with a one-line description. - Names the next several planned tutorials in prose (not as broken links): personal brain quickstart, connect your agent, VC dealflow, vault migration, code brain. No fake links. - Points at the tutorial index page for the full roadmap. - Closes with "Open an issue describing the workflow you want documented" to invite prioritization input from real users. New tutorial index at docs/tutorials/README.md: - Shipped section: company-brain.md - In-progress roadmap with 7 candidate tutorials (personal brain quickstart, connect your agent, VC dealflow, vault migration, code brain, fully local, dream cycle setup) - Each roadmap entry names the persona, the core commands the tutorial would demonstrate, and the differentiator - "Want to write one?" section invites community PRs and points at company-brain.md as the model Reverted the obscure topologies.md "See also" link from pointing at company-brain.md specifically to pointing at the tutorials index overall — the tutorial belongs in the README's Tutorials section where users actually look, not buried in an architecture doc. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(tutorials): land personal-brain tutorial (full-stack install) The canonical solo install walkthrough, adapted from Garry's live setup session notes (the "Apple I, soldering breadboards" session). Builds the full stack: 2 GitHub repos, Telegram bot, AlphaClaw on Render, OpenClaw + GBrain + Supabase. About 2 hours end-to-end, $100-150/month sustained. Replaces the "Set up your personal brain in 30 minutes" stub on the tutorials roadmap with something genuinely complete. Edits to the source draft: - Stripped brain-page YAML frontmatter (type/access/links/etc — not needed for a public docs file) - Privacy sweep per CLAUDE.md: removed real-name references to the collaborator and the agents involved in the session, replaced with "a collaborator" / "my main agent" / generic placeholder names - First-person voice consistency: the source draft slipped between first person and third person ("Garry walked through"); rewrote everything in first person - Zero em-dashes used as connectors (verified by grep) - Added ZeroEntropy to the providers list (it's the default; not mentioning it would leave readers paying 2.6× more on embeddings) - Opened with a router paragraph that points brain-layer-only readers at INSTALL.md and team readers at company-brain.md, so each audience finds the right walkthrough fast Tutorials index updated: - personal-brain.md promoted from In Progress to Shipped (it IS the "set up your personal brain in 30 minutes" entry that was on the roadmap, just better-named and more complete) README.md Tutorials section now lists both shipped tutorials side by side. Reads naturally: solo install first (broader audience), team install second. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(tutorials): rewrite company-brain as a true superset of personal-brain Per @garrytan: the company brain tutorial should pick up from where the personal brain tutorial leaves off, not duplicate the install. Pedagogical flow now reads: "you already did personal-brain; here is what to add to make it multi-user." Restructure: - Opens with explicit "this tutorial picks up where the personal brain tutorial leaves off" + a router for readers who haven't done that one yet. No duplicated install steps. - Part 1 (mental model) reframed as "what changes when you go from personal to company" + "what this is NOT" (not a different install, not a thin-client-everywhere replacement). - Part 2 is now "switch the brain backend to multi-user Postgres" — surfacing the migrate --to supabase path for readers who started on PGLite, skip-to-Part-3 for readers already on Postgres. - Part 3 adds the new content @garrytan called for: per-person folder structure inside each source. customers/alice-example/, internal/ alice-example/, internal/bob-example/, internal/legal/ etc. So teammates' writes don't collide and the per-person/per-role abstraction is real on disk, not just in OAuth scope. - NEW Part 6: per-person crons. Each teammate gets their own scheduled tasks (7am customer digest for alice, 9am ops status for bob, weekly contract compliance for carol) scoped to their OAuth client so the cron can only touch their slice. - NEW Part 7: per-person skills. The 60+ shipped skills are generic; teams want a few specific ones (onboarding-new-hire, customer-success-followup, weekly-team-digest). Scaffolded via gbrain skillify scaffold, scoped via allowed_clients in frontmatter. - Existing strong parts retained: OAuth scoping + verify, per- teammate AI client connect, first synthesized query, operating notes, gotchas. Reworded where needed to refer back to personal- brain steps instead of re-explaining them. Voice + style sweeps: - Zero em-dashes used as connectors (verified by grep) - Zero internal jargon (no "Cat 22", "P@5", "RRF", "MRR", etc.) - Zero version chatter in body text (only the one acceptable reference to the dated benchmark filename in a docs link) - "Brain layer" / "synthesized answer" framing, not "Think" branding - First-person Garry voice in intro/motivation paragraphs - All examples use placeholder names (alice-example, bob-example, carol-example, acme-co, diana-example) - No mentions of Mem0 / Hindsight (per session-long convention) Word count: 3608 (vs 3717 before — about the same length, but more of those words now describe the NEW content rather than re-explaining prereq install). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(tutorials): enrich company-brain with real-world patterns from production deployment Mined production patterns from my own running company-brain deployment to ground the tutorial in shapes that actually work. Added four substantive sections. Part 3 (sources) gains "Two scoping models" sidebar: - Model A: separate sources with OAuth scoping (SQL-enforced isolation, right for multi-user with different AI clients per person — what the tutorial walks you through). - Model B: one source with partners/<slug>/ directory convention (simpler ops, scoping is convention-only, right when one agent serves everyone over Telegram — what I actually run in production). - Mix-and-match guidance: separate sources for the obviously-different ones AND partners/<slug>/ inside the shared source for per-person workspace. Part 7 (skills) gains "Shared rule files at the skills root" subsection: - _brain-filing-rules.md: iron-rule decision tree for where new pages belong. Every ingest skill consults it before creating a page. - _output-rules.md: output quality standards (deterministic links built from API data not LLM-composed strings, citation format, no AI-slop). - _excluded-people.md: privacy gate naming people the brain must never reference even when they appear in source material. Re-attribute or discard. The file that prevents accidental publication of things about people who aren't fair game. - _operating-rules.md, _x-ingestion-rules.md, _x-api-rules.md. - These turn into the de facto company policy for the agent. Edit one, every skill picks it up next request. NEW Part 8 "Wire Slack carefully": - Two crons, two jobs (scan every 5-15min for live signals + archive nightly for full history). - Channel-to-task-ID mapping via topic-registry.json (don't reference raw Slack channel IDs in skills; friendly names that resolve at runtime). - Deterministic links rule (LLM-composed Slack URLs hallucinate constantly; build from API data only). - Dismissed-items state so re-scans don't surface noise that was already triaged. - Per-channel scoping mirrors per-person scoping. Sensitive channels scope by OAuth client. - Names the actual production skills (slack, slack-scan, slack-archive) for scaffold reference. NEW Part 9 "Onboard each teammate yourself (the botmaster pattern)": - The load-bearing UX gate for adoption. Don't hand a teammate an OAuth credential and tell them to "try it out." That's how internal tools die. - Step 1: pre-populate their slice (partners/<their-slug>/USER.md with role/focus/priorities/preferences, 5-10 concepts that are theirs, 2-3 example brain entries that demonstrate the shape). About 20 minutes per teammate. - Step 2: walk them through 2-3 wow flows personally. A synthesis query (show the brain layer). A gap-analysis query (build trust). A write-back flow (show capture value). About 15 minutes. - Step 3: graduate to DM only after the wow moment lands. The order flips the conversion rate. - About 45 minutes per person total. Cheaper than an unadopted tool. Parts 8-12 renumbered to 10-14 to make room. Cross-references in body text checked (Part 3 ref in Part 5, Part 4 ref in operating notes, Part 5 ref in Slack section all still correct). Word count: 4938 (vs 3608 before). Still readable in one sitting per the original target; added content is all load-bearing patterns from production. Voice gates: - Zero em-dashes used as connectors (sed-replaced all 8 introduced by the additions with periods) - Zero internal jargon (no Cat N, no P@5, no RRF, no MRR) - Zero banned names (no Brad, Gessler, Wintermute, Zion, Straylight, Seibel, Caldwell, Mem0, Hindsight) - "Brain layer" / "synthesized answer" framing preserved - First-person Garry voice throughout - All examples use placeholder names (alice-example, bob-example, carol-example, diana-example, acme-co) Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(tutorials): expand personal-brain Step 7 with the three real Supabase gotchas @garrytan: the personal-brain tutorial needs to surface the specific Supabase setup gotchas I hit the hard way. Rewrote Step 7 with the operational detail. Three new subsections: - 7a: Turn on pgvector. The vector extension has to be toggled in Database → Extensions before GBrain's schema migrations will run. Five seconds in the dashboard, an hour of debugging if you forget. - 7b: Use the CONNECTION POOLER string, not the direct connection. Direct is port 5432, IPv6-only. Pooler is port 6543 via pgbouncer, IPv4-compatible, survives connection storms from parallel workers. Shows the exact pooler hostname format and the gbrain config set command. - 7c: Buy the IPv4 add-on. About $4/month. Even with the pooler, some Supabase regions / Render plans hit IPv6 resolution snags. Symptom: network-unreachable errors or connect hangs in gbrain doctor. Toggle on in Project Settings → Add-ons. Saves debugging time on multiple installs. - 7d: Verify with gbrain doctor — names which of 7a / 7b / 7c to revisit if a check fails. The old "Operating note" about Supabase being the scaling bottleneck preserved at the end of the section since it's a different concern (scale, not setup). Voice gates: 0 em-dashes (verified), first-person Garry voice ("I hit the hard way"), no internal jargon, no banned names. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): rewrite "What this looks like" for someone arriving cold @garrytan: the prior version assumed too much. "Eval receipt", "top-K vector retrieval", "MemPalace", "Haiku judge", "Facts fence", "synthesis layer" — all jargon that requires reading the rest of the project to parse. A new reader bounces. New version requires zero prior context: - Sets up a universal scenario anyone gets: "you have a meeting with alice tomorrow, what do you need to know?" - Shows what a typical tool returns (a list of 5 pages with snippets) so the reader sees the gap themselves - Shows what gbrain returns (a real briefing with the open items surfaced, plus a "heads up" about what's missing from the brain) - Lets the two outputs speak for themselves, no judge scores or benchmark numbers in the body - Closes with one plain-English sentence on the difference: "Search finds the pages. The brain reads them for you and writes the answer." What got cut: - The eval-receipt path reference (means nothing to a new reader) - The Haiku judge scores (0/10 vs 9/10) — not useful out of context - The verbatim judge verdict quotes (long, internal vocabulary) - The "Facts fence", "typed-claim", "synthesis layer" feature names - The MemPalace name-drop - The link to the comprehensive benchmark page (it's still reachable from the Tutorials and benchmark sections; doesn't need to be in the intro) - The numbered "three things gbrain think did" breakdown The example content is illustrative (same scenario shape as a real production query) but stripped of the internal benchmark wrapper. Reads naturally as "imagine you're about to ask gbrain something." Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: capitalize proper-noun names in prose across README + tutorials @garrytan caught lowercase "alice" in prose — proper nouns should be capitalized. The lowercase was leaking from the slug convention (people/alice as the actual storage slug) into descriptive text. Rule applied: capitalize Alice / Bob / Carol / Diana / Acme when used as a person or company name in prose. Keep lowercase in: - Slugs and file paths (people/alice, customers/acme-co) - Code identifiers in fenced blocks where the slug IS the value - URLs and hostnames (brain.acme-co.com) - Channel-name-style references (#alice-customers) Files swept: README.md, docs/tutorials/company-brain.md, docs/tutorials/personal-brain.md, docs/tutorials/README.md. The README sweep was the primary target (Garry's actual call-out); the tutorial sweep keeps voice consistent across all the front-door docs. Hand-fixed four occurrences inside code-fenced blocks that were human comments rather than code (terminal session comments "# Terminal 1, as Alice", "# Terminal 2, as Bob", directory-tree inline comments "← Alice's customer notebook"). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test(readme-hero-anchors): rotate ZeroEntropy anchor → search-vs-answer headline CI caught one expected regression after v0.40.8.1's README rewrite. The D9 hero-anchors guard required "ZeroEntropy" in the first 50 lines of README.md (the v0.36.0.0 default story). The post-rewrite hero intentionally rotated that out per Garry's "no version chatter in README" directive — ZeroEntropy still appears further down (line 211, 231, 279) but no longer in the hero. The guard's docstring explicitly handles this case: "did we deliberately rotate the headline? If yes: update the anchors here." Rotation: - Dropped: regex /ZeroEntropy|\bZE\b/ in the first 50 lines - Added: regex matching the new headline "Search gives you raw pages. GBrain gives you the answer." which is the load-bearing differentiator of the post-rewrite hero. If a future cleanup PR accidentally rewords the search-vs-answer framing, the new anchor catches it the same way the ZeroEntropy anchor caught accidental drops before. Other 4 anchors unchanged (OpenClaw + Hermes + production-number + P@5/R@5 — all still load-bearing). Updated docstring records the v0.40.8.1 rotation as the audit trail for the next time this happens. Verified: `bun test test/readme-hero-anchors.test.ts` → 5 pass / 0 fail. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): restore agent-led install path + per-client MCP guides The README install section had collapsed to three generic shapes ("agent platform", "CLI", "MCP server") that buried the load-bearing flow: paste a URL pointing at INSTALL_FOR_AGENTS.md into your agent and let it do the work. That's the path most users actually take. Restored the original three-tier structure with an explicit second tier for "install it into your existing agent" (Codex, Claude Code, Cursor), plus surfaced the per-client MCP guides individually so users see the command shape they actually need instead of one generic docs/mcp/ link. Six per-client MCP links now in the README itself: Claude Code, Cursor/Windsurf (stdio), Claude Desktop, Claude Cowork, Perplexity Computer, ChatGPT. Each carries the one-line shape that matters (claude mcp add, Settings > Integrations, OAuth 2.1, etc.). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): link personal-brain tutorial from the agent-install path People landing on the README without an existing OpenClaw or Hermes deployment need a starting point that walks the whole flow, not just "paste this URL into your agent." The personal-brain tutorial already covers picking a platform, deploying it, pointing it at INSTALL_FOR_AGENTS.md, and verifying the first query. Surfaced as a callout right under the agent-install snippet so the path is visible to first-time users without burying the experienced-user flow. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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v0.40.7.0 Schema Cathedral v3 — agent-on-ramp + production rebuild of PR #1321 (#1327)
* v0.40.6.0 Phase 1 foundations — pack-lock + mutate-audit + cache invalidation + lint rules + best-effort
Six new primitives that Phase 2's withMutation skeleton (next commit) depends on.
No consumers yet; all callers wire up in Phase 4. Foundations ship first per
codex C1 phase-ordering finding from /plan-eng-review.
1.1 pack-lock.ts (18 cases)
Atomic acquire via openSync(path, 'wx') = O_CREAT|O_EXCL. Kernel-level
atomic, NO TOCTOU window. Codex C8 caught that page-lock.ts:79+96 has
existsSync+writeFileSync (TOCTOU) — we deliberately do NOT copy it.
Stale detection via TTL (60s default) + kill(pid, 0) liveness probe.
TTL refresh every 10s while withPackLock(fn) runs so long DB-aware
lint/stats on big brains don't go stale. --force = "steal stale lock"
(NOT "skip locking"). Lock path per-pack so two packs never block.
1.2 mutate-audit.ts (13 cases)
ISO-week JSONL at ~/.gbrain/audit/schema-mutations-YYYY-Www.jsonl.
Privacy redacted per D20: type names → sha8, prefixes → first slug
segment only. Matches candidate-audit.ts privacy posture. Both verbose
surfaces gate on GBRAIN_SCHEMA_AUDIT_VERBOSE=1 (same env). Logs BOTH
success AND failure events so Phase 9's schema_pack_writability doctor
check has signal to read (closes codex C11). summarizeMutations()
primitive shipped for cross-surface parity between doctor + future
audit CLI.
1.3 registry.ts cache invalidation + stat-mtime TTL (10 cases)
invalidatePackCache(name?) walks the extends-chain reverse-graph
(every cached entry whose chain contains name is evicted). This is the
codex C6 fix — pre-v0.40.6, editing a parent pack silently left
children stale because cache identity was child-bytes-only. New
per-name CacheEntry tracks the file-stat snapshot of every file in
the extends chain. tryCachedPack(name) is the TTL-gated fast path:
inside STAT_TTL_MS (1000ms default, env GBRAIN_PACK_STAT_TTL_MS)
returns cached without statting. Outside the window: stats every file
and cascade-invalidates on any mtime change (D11 cross-process
detection). resolvePack reference-equality preserved on byte-identical
re-build. ASCII state-machine diagram in file header (D9).
1.4 best-effort.ts (4 cases)
loadActivePackBestEffort(ctx) returns ResolvedPack | null. Single
source of truth for the 4 T1.5 wiring sites (Phase 8). null means
"EMPTY FILTER" semantics, NOT "fall back to hardcoded defaults" —
pack-load failure must be loud, per D4. Never throws.
1.5 lint-rules.ts (35 cases)
11 pure rule functions extracted from CLI handlers per codex C13/D16.
9 file-plane rules + 2 DB-aware rules (extractable_empty_corpus, mutation_count_anomaly).
Phase 2 withMutation pre-write gate composes file-plane subset.
runAllLintRules() returns {ok, errors, warnings} structured report
ready for CLI + MCP.
1.6 query-cache-invalidator.ts (4 cases)
invalidateQueryCache(engine, sourceId?) DELETEs query_cache rows so
cached search results bound to old page types don't survive a
schema mutation. Reuses SemanticQueryCache.clear() so we don't
reinvent the PGLite+Postgres parity. Codex C9 fix.
Tests: 84 new cases across 6 test files. All 153 schema-pack tests green.
Plan: ~/.claude/plans/system-instruction-you-are-working-recursive-thacker.md
Closes: half of T2-T7 from the plan's Implementation Tasks JSONL.
Successor to: closed PR #1321 (community PR; author garrytan-agents).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.40.6.0 Phase 2 — mutate.ts withMutation skeleton + 11 primitives
Builds on Phase 1 foundations (pack-lock, mutate-audit, lint-rules,
cache invalidation, query-cache-invalidator).
withMutation(packName, opts, mutator, op, ctx): 8-step skeleton wrapping
every primitive. Atomic .tmp+fsync+rename. Per-pack file lock. Pre-write
file-plane lint validation gate. Audit log on success AND failure. Pack
cache + query cache invalidation hooks. ASCII state-machine diagram in
file header per D9.
11 primitives, each ~5-line wrapper around withMutation:
add_type, remove_type (with codex C14 reference check), update_type
add_alias, remove_alias, add_prefix, remove_prefix
add_link_type (rejects fm_links refs on remove)
remove_link_type, set_extractable, set_expert_routing
Inline minimal JSON→YAML emitter so mutating a YAML pack stays YAML.
The emitter's array-of-mappings nesting was tricky: the first key sits
inline with the `- ` (e.g. `- name: person`), subsequent keys live at
indent+1, and nested arrays inside the mapping keep their relative
depth (the v0.40.6 emitter bug I fixed pre-commit: trim+prefix lost
internal indent of nested arrays like path_prefixes).
YAML round-trip: emitted YAML reparses cleanly through parseYamlMini.
Comments and formatting NOT preserved (documented in plan; pin pack.json
if you care about layout).
Codex C14 reference check: removeType refuses if any other type's
aliases/enrichable_types/link_types/frontmatter_links references the
target. STILL_REFERENCED error names every reference for cleanup.
Validation gate composes runFilePlaneLintRules from Phase 1.5 — a
mutation that would create a dangling ref or prefix collision fails
BEFORE the .tmp write (the invariant: pack file on disk is NEVER
partial).
Tests: 34 cases pinning every primitive + skeleton invariant. Bundled
guard, codex C14, atomicity (crash-mid-write leaves original untouched,
lock auto-released after mutator throw), YAML round-trip, validation
gate firing on prefix collision.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.40.6.0 Phase 3 — stats + sync pure core functions
Both ship as runStatsCore / runSyncCore pure functions so Phase 4 CLI
handlers (next commit) and Phase 7 MCP ops (later) both compose without
duplicating logic. Codex C13 / D16 prereq for the MCP exposure phase.
stats.ts (17 cases):
Multi-source aware: sourceIds[] (federated read) OR sourceId (single)
OR neither (whole-brain aggregate). NULLIF(type, '') normalizes
empty-string + NULL to one untyped bucket (pages.type is NOT NULL in
the schema so empty string is the legacy "untyped" representation).
Soft-delete exclusion. by_type sorted by count desc, ties by name asc.
Empty-brain coverage:1.0 (vacuous truth, matches getBrainScore).
Dead-prefix detection: pack-declared prefixes with zero matching
pages surface as DeadPrefixHint[] (agent's drilldown signal for
mis-declared paths). Best-effort: pack-load failure leaves
pack_identity:null + dead_prefixes:[].
sync.ts (13 cases):
D14 chunked UPDATE: 1000-row batches per prefix. Each batch:
WITH win AS (SELECT id FROM pages WHERE untyped+prefix LIMIT $batch),
upd AS (UPDATE ... WHERE id IN win RETURNING 1) SELECT COUNT(*). Loop
until zero rows. Concurrent writers never block on the row-set for
more than ~100ms per batch (vs the multi-second monolithic UPDATE
shape PR #1321 had).
Codex C5 write-side scoping: sourceId param directly, NOT
sourceScopeOpts which is read-side and inherits OAuth federation
reads. Phase 7 MCP op (schema_apply_mutations) enforces at dispatch.
Dry-run by default: per-prefix probe returns would_apply + 10-slug
sample (the drilldown signal). Apply path returns total_applied.
Idempotency contract pinned: second apply finds zero matching rows.
Soft-delete exclusion on both probe + update. Dead-prefix flag set
when probe returns count=0. JSON envelope schema_version:1.
Tests use canonical PGLite block per CLAUDE.md test-isolation rules.
seedPage helper auto-seeds sources(id) row before FK insert.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.40.6.0 Phase 4 — wire 14 new schema CLI verbs
Thin handlers wrapping Phase 2's mutation primitives + Phase 3's
stats/sync cores. CLI is the human surface; Phase 7 wires the same
cores into MCP for agent use.
New verbs:
Authoring:
add-type <name> --primitive P --prefix dir/ [--extractable]
[--expert] [--alias A]* [--pack <name>]
remove-type <name> [--pack <name>]
update-type <name> [--extractable BOOL] [--expert BOOL]
[--primitive P] [--pack <name>]
add-alias <type> <alias> [--pack <name>]
remove-alias <type> <alias> [--pack <name>]
add-prefix <type> <prefix> [--pack <name>]
remove-prefix <type> <prefix> [--pack <name>]
add-link-type <name> [--inverse V] [--page-type T] [--target-type T]
[--pack <name>]
remove-link-type <name> [--pack <name>]
set-extractable <type> BOOL [--pack <name>]
set-expert-routing <type> BOOL [--pack <name>]
Activation:
reload [--pack <name>] Flush in-process cache; --pack scopes
Discovery + repair:
stats [--source <id>] Per-type counts + coverage + dead prefixes
sync [--apply] [--source <id>] Backfill page.type (chunked UPDATE)
cli.ts: schema added to CLI_ONLY_SELF_HELP so `gbrain schema --help`
routes to printHelp() instead of the generic one-line stub.
withConnectedEngine defensive fix retained from PR #1321:
EngineConfig built once and passed to BOTH createEngine and
engine.connect for future-proof against engine implementations that
read URL at connect time.
End-to-end agent journey verified:
fork gbrain-base mine → use mine →
add-type researcher --primitive entity --prefix people/researchers/
--extractable --expert →
active (shows 23 page types) →
stats (shows 100% coverage on empty brain, vacuous truth).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.40.6.0 Phase 5+6+7 — schema lint with rich rules + 9 new MCP ops
This is the marquee commit: Wintermute and any other remote OAuth agent
can now author + introspect schema packs over normal HTTPS MCP. Phases
5+6 collapse into Phase 7 because the new MCP ops compose Phase 1.5's
lint rules and Phase 2/3's mutation/stats/sync cores directly — no
extra extraction needed (D6 from /plan-eng-review).
Phase 5: schema lint CLI wired to runAllLintRules from Phase 1.5
Replaces the prior 2-rule check (duplicate names + missing prefix)
with the full 11-rule suite. New --with-db flag opts into the 2
DB-aware rules (extractable_empty_corpus, mutation_count_anomaly).
JSON envelope shape stable. Exit code 1 on any error.
Phase 7: 9 new MCP operations
Read-scope (NOT localOnly — read scope is safe to expose remote):
get_active_schema_pack — identity packet (pack name, sha8, counts).
list_schema_packs — bundled + installed names.
schema_stats — composes runStatsCore from Phase 3.
schema_lint — composes runAllLintRules; --with-db is
CLI-only (DB-aware rules need engine).
schema_graph — JSON {nodes, edges} from link_types
inference + frontmatter_links.
schema_explain_type — settings for one declared type.
schema_review_orphans — untyped pages drilldown.
Admin-scope (NOT localOnly per D2 — Wintermute reaches via OAuth):
schema_apply_mutations — BATCHED per D10. Single MCP tool taking
a mutations[] array; composes all 11
mutate primitives. Atomic batch_id; outer
withPackLock wraps the whole batch so no
other writer can slip in mid-iteration.
Partial-results returned on mid-batch
failure for forensic agent debugging.
Audit log records actor=mcp:<clientId8>
(D20 privacy-redacted shape).
reload_schema_pack — flush in-process cache + extends-chain
cascade (codex C6 fix from Phase 1.3).
withConnectedEngine defensive fix applied to schema.ts:withConnectedEngine
(PR #1321 closed) — EngineConfig built once and passed to BOTH
createEngine AND engine.connect for defense in depth.
Test seams:
- operationsByName lookup pinned for every new op.
- All 9 ops have scope + localOnly declarations pinned to lock in
the trust posture.
- Batched mutation atomicity tested: partial-failure returns
{error: mutation_failed, partial_results: [...]} with one batch_id
across all results.
- Audit log actor=mcp:<clientId.slice(0,8)> capture verified
end-to-end (audit JSONL read back after the op handler runs).
- Empty mutations[] rejected with invalid_request.
- Unknown op surfaced via SchemaPackMutationError INVALID_RESULT.
Coverage: 23 new cases for the 9 ops (operations-schema-pack.test.ts).
All 255 schema-pack-related tests green.
Plan: ~/.claude/plans/system-instruction-you-are-working-recursive-thacker.md
Successor to: closed PR #1321.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.40.6.0 Phase 8 + 10 + 12 — T1.5 wiring, schema-author skill, ship
Final wave commit. Brings the cathedral from "shipped but undiscoverable"
to "shipped + agents find it + agents use it."
Phase 8 (partial T1.5 wiring — agent-facing surfaces):
- whoknows CLI (src/commands/whoknows.ts:340) consults the active pack
via loadActivePackBestEffort + expertTypesFromPack. Pack-load failure
→ EMPTY filter (NOT hardcoded ['person', 'company'] defaults) per
D4. A researcher type declared --expert in a custom pack now
surfaces in `gbrain whoknows "ML"` results. Pre-v0.40.6 it silently
never matched.
- find_experts MCP op (src/core/operations.ts:2820) same wiring so
OAuth clients (Wintermute etc.) inherit pack-aware expert routing
over HTTP MCP, not just CLI.
- facts/eligibility.ts and enrichment-service.ts union widening
deferred to v0.40.7+ (filed in TODOS.md as 2 follow-up entries) —
larger blast radius than fit this wave's context budget.
Phase 10 (skill + RESOLVER + Convention — the discoverability layer):
- skills/schema-author/SKILL.md — agent dispatcher for "evolve the
schema pack." 36 trigger phrases route here. Explicit Non-goals
section names brain-taxonomist (filing one page) and eiirp
(schema-check during iteration) so agents pick the right surface.
7-phase workflow: brain → assess → propose → apply → sync → verify
→ commit. Lists every gbrain schema CLI verb + every MCP op the
skill uses. brain_first: exempt frontmatter (this skill IS the
brain-first path for schema authoring).
- skills/conventions/schema-evolution.md — decision tree for "when to
add a type vs alias vs prefix." <20 pages → don't pack-codify;
20-100 → alias or narrow prefix; 100+ → first-class type. Don'ts
section + "when to remove a type" + "when to commit the pack" all
answered from one place.
- skills/RESOLVER.md entry with full functional-area dispatcher line
(compressed routing pattern per v0.32.3 dispatcher convention).
- schema-evolution.md added to the cross-cutting Conventions list.
Phase 12 (ship bookkeeping):
- VERSION → 0.40.6.0
- package.json → 0.40.6.0
- CHANGELOG.md entry with ELI10 lead per CLAUDE.md voice rules
(250+ words explaining the wave in plain English before any
file/function name appears), full "To take advantage of v0.40.6.0"
paste-ready commands block, itemized changes by category, credit
to @garrytan-agents (PR #1321 author).
- TODOS.md gains 10 new follow-up entries grouped under
"v0.40.6.0 Schema Cathedral v3 follow-ups (v0.40.7+)" covering:
enrichment-service union widening, facts/eligibility wiring, 3
doctor checks, T16 + T16.1 evals, T19 federated closure, T20
extends merging, T21 YAML comments, T22 admin SPA, T23
schema:write scope, T24 multi-tenant federation.
- llms-full.txt regenerated via bun run build:llms (CLAUDE.md
edits trigger the test/build-llms.test.ts gate — required per
repo discipline).
Verification:
- bun run typecheck clean.
- Full agent journey smoke-tested end-to-end in Phase 4 commit
(fork → use → add-type → active → stats — all green).
- All 255+ schema-pack tests green from Phases 1-7.
Total wave: 6 commits, ~5000 net LOC, 84 new tests, 21 design
decisions captured. PR #1321 closed with successor pointer comment.
Plan: ~/.claude/plans/system-instruction-you-are-working-recursive-thacker.md
Co-Authored-By: garrytan-agents <garrytan-agents@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix(ci): rename Wintermute → 'your OpenClaw' + add schema-author skill conformance
CI failures from PR #1327 first run:
1. check:privacy script flagged 4 'Wintermute' name leaks (CLAUDE.md:550 rule —
never use the private OpenClaw fork name in public artifacts):
- src/core/operations.ts:3816 → 'your OpenClaw and similar remote agents'
- src/core/operations.ts:4015 → 'your OpenClaw, etc.' (in description)
- src/core/operations.ts:4225 → 'your OpenClaw, etc.' (in comment)
- test/operations-schema-pack.test.ts:325 → clientId 'remoteAgentClient12345678'
(matching audit-actor regex updated: 'mcp:remoteAg' instead of 'mcp:wintermu')
2. skills/manifest.json missing schema-author entry. Added between
brain-taxonomist and skillify per alphabetical-ish grouping.
3. skills/schema-author/SKILL.md missing 3 conformance sections per
test/skills-conformance.test.ts:
- ## Contract (inputs/outputs/side effects/idempotency/trust/atomicity)
- ## Anti-Patterns (don't mutate bundled packs, don't add types for one-off
directories, don't conflate filing vs. schema authoring, etc.)
- ## Output Format (per-mutation JSON, per-batch JSON, stats JSON, sync
dry-run JSON, human format, error envelope codes)
The 3 sections were inserted ABOVE the existing 'Failure modes' section so
the existing failure-mode bullets are still adjacent to the new error
envelope codes in Output Format.
Verified locally:
- bun run check:privacy → clean
- bun test test/skills-conformance.test.ts test/check-resolvable.test.ts test/check-resolvable-cli.test.ts test/regression-v0_22_4.test.ts → 286/286 pass
- bun test test/operations-schema-pack.test.ts → 23/23 pass
- bun run verify → clean (privacy + skill_brain_first + fuzz-purity + typecheck)
llms.txt + llms-full.txt regenerated.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: v0.40.7.0 — schema cathedral v3 README + CLAUDE.md annotations
Doc-debt cleanup from the v0.40.7.0 ship (Phase 12 had deferred these to
fit context budget; /document-release surfaced the gap):
- README.md: new "What's new in v0.40.7.0" lead paragraph above the
v0.36.4.0 entry. ELI10 lead: "Your agents can now author your brain's
schema pack themselves" + the agent journey + 14 CLI verbs + 9 MCP
ops + schema-author skill boundary callouts.
- CLAUDE.md: new "Schema Cathedral v3 (v0.40.7.0)" section between the
thin-client routing cluster and the Commands section. 14-bullet
Key Files cluster covering pack-lock / mutate-audit / registry /
best-effort / lint-rules / query-cache-invalidator / mutate / stats /
sync / schema.ts CLI / operations.ts MCP / whoknows T1.5 wiring /
schema-author skill / schema-evolution convention. Each bullet
references the design decisions (D2/D4/D6/D8/D9/D10/D11/D13/D14/D20)
and codex findings (C5/C6/C8/C9/C13/C14) captured during /plan-eng-review.
Closes the "CLAUDE.md has zero v0.40.7.0 mentions" doc debt.
- llms-full.txt + llms.txt regenerated.
Privacy check clean (no Wintermute leaks in the new prose — used "your
OpenClaw" per CLAUDE.md:550 rule). test/build-llms.test.ts 7/7 green.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: tutorial — Build your first schema pack (closes v0.40.7+ doc-debt)
Closes the tutorial gap surfaced by /document-release's Diataxis coverage
map. The schema-pack cathedral shipped with reference (CLAUDE.md cluster),
how-to (SKILL.md 7-phase workflow), and explanation (conventions/
schema-evolution.md decision tree), but no tutorial — no concrete
"your first schema mutation" walkthrough.
docs/schema-author-tutorial.md ships exactly that:
- 8 numbered steps, time-to-first-result < 3 (active pack visible by step 2)
- Walks from `gbrain schema fork gbrain-base mine` through `add-type
researcher` + `sync --apply` + proving the T1.5 wiring via `gbrain
whoknows` surfacing the new type
- Every step shows the exact command and expected output
- Placeholder pages (alice-example, bob-example, charlie-example) so any
brain can run the tutorial without affecting real content
- "What you built" section recaps state on disk + active wiring
- "Next steps" cover add-link-type, add-alias, lint --with-db, commit to
source control, MCP path for agents
- "Related docs" cross-links to reference (CLAUDE.md cluster) + how-to
(SKILL.md workflow) + explanation (schema-evolution.md)
Cross-linked:
- README.md "What's new in v0.40.7.0" paragraph gets a "Walkthrough:"
pointer at the end
- skills/schema-author/SKILL.md gets a "## Tutorial" callout just above
the workflow phases — agents that hit the skill via RESOLVER routing
see the tutorial pointer first
Closes the Diataxis quadrant matrix to full coverage:
- Tutorial: ✅ docs/schema-author-tutorial.md (NEW)
- How-to: ✅ skills/schema-author/SKILL.md workflow
- Reference: ✅ CLAUDE.md cluster + gbrain schema --help
- Explanation: ✅ skills/conventions/schema-evolution.md
Privacy check clean. Typecheck clean. llms-full.txt regenerated (545KB).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: what-schemas-unlock — the WHY doc (7 use cases + structural argument)
The schema-author tutorial walks through HOW to mutate a pack. This new
doc explains WHY agents and users should care, with concrete killer use
cases on real corpus shapes:
1. The 4000 invisible meetings — untyped pages skip every structural
surface (whoknows, find_experts, recall, think). Adding a `meeting`
type + sync flips them from invisible to queryable. Same content,
completely different agent experience.
2. The founder ops brain — 4 type-adds + 4 link-types build a
CRM-shaped query surface. `gbrain whoknows "Series A SaaS"` routes
through investor + portco specifically; `graph-query` walks intro
chains. Downstream of notes, not parallel to them.
3. The research brain — researcher / paper / lab / grant / dataset
types + cites / authored / uses link verbs turn a reading-list-as-
markdown into a queryable research graph.
4. The legal brain (or anything where claims have numbers) — typed
`damages=5000000`, `filed_date=...` become comparable across pages
of the same type. Generic note systems can't do this because they
don't know which numbers belong to which type.
5. The team brain — each mounted brain has its own schema pack. Two
engineers searching the same brain get DIFFERENT routing because
their personal packs declare different expert types.
6. The agent-co-curates pattern — the NEW thing in v0.40.7.0. Agent
watches your ingestion stream, runs `gbrain schema detect`
periodically, proposes a new type when a pattern accumulates, applies
it via batched MCP `schema_apply_mutations` after one approval.
Brain learns. Audit log captures the agent's client_id as
`actor: mcp:<clientId8>`.
7. Before-vs-after on real content — pick a corpus, note top-3
whoknows results, add the type via sync, re-run. The numerical
delta IS the win.
Then the structural argument: types matter at query time. Untyped
content is invisible content. The schema is queryable AND mutable AND
auditable — that's the production-system difference from "vibes-based
knowledge management."
Closes with the v0.40.7.0-specific list of what changed (withMutation
skeleton, O_CREAT|O_EXCL atomic lock vs page-lock.ts TOCTOU pattern,
privacy-redacted audit log, 9 MCP ops, T1.5 wiring, cross-process
invalidation via stat-mtime TTL gate).
Cross-linked:
- README.md "What's new in v0.40.7.0" paragraph now has both the
"Why it matters:" pointer (this doc) AND the "Walkthrough:"
pointer (tutorial).
- docs/schema-author-tutorial.md opens with "Want the WHY before the
HOW?" link to this doc.
- skills/schema-author/SKILL.md now has a "Tutorial + vision" section
that points at both, with explicit guidance that agents should read
the WHY doc before pitching schema authoring to a user.
177 lines. Privacy check clean. Typecheck clean. llms-full.txt
regenerated (545KB).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: surface schema docs from README Capabilities + Docs index + llms.txt
The two new schema docs were ONLY linked from the v0.40.7.0 "What's new"
paragraph in README. That paragraph will get pushed down by every future
release and become a worse and worse entry point.
Real discovery paths added:
1. README.md `## Capabilities` section — new "Agent-authored schema
(v0.40.7.0)" bullet between "Brain consistency" and "## Integrations".
Permanent home alongside Hybrid search, Self-wiring graph, Minions,
43 skills, Eval framework. Includes the one-paragraph pitch + 3
pointer links (vision / tutorial / agent skill).
2. README.md `## Docs` index — two new lines added at the top of the
list (right after docs/INSTALL.md, before docs/architecture/):
- docs/what-schemas-unlock.md with one-line description
- docs/schema-author-tutorial.md with one-line description
3. scripts/llms-config.ts `Configuration` section — both docs added to
the curated llms.txt entry list so the LLM-readable map points at
them. Sits right after docs/GBRAIN_RECOMMENDED_SCHEMA.md (topical
grouping). includeInFull defaults to true so they ride in the
single-fetch llms-full.txt bundle.
Result: schema docs are now reachable from 5 entry points instead of 1:
- README "What's new" paragraph (release-pinned, will age out)
- README Capabilities bullet (permanent, top-of-funnel)
- README Docs index (permanent, end-of-page reference)
- llms.txt (LLM-readable curated map)
- llms-full.txt (single-fetch bundle for agents)
Also caught 3 leftover Wintermute leaks in docs/what-schemas-unlock.md
that the privacy check flagged: agent-co-curates pattern now uses "your
OpenClaw"; `register-client wintermute` example renamed to
`register-client my-agent` per CLAUDE.md:550 privacy rule. Privacy
check clean. test/build-llms.test.ts 7/7 green. llms.txt 4314 → 5000
bytes, llms-full.txt 545KB → 572KB.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Co-authored-by: garrytan-agents <garrytan-agents@users.noreply.github.com>
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d28be5d091 |
v0.40.4.0 feat(search): selective graph signals + per-stage attribution + audit-writer unification (#1300)
* v0.40.4.0 T1: shared audit-writer primitive Extract createAuditWriter() helper. Five hand-rolled JSONL audit modules (rerank-audit, shell-audit, supervisor-audit, audit-slug- fallback, phantom-audit) duplicated the same ISO-week filename math, best-effort write loop, and read-current-plus-previous-week loop. T2 refactors all 5 onto this primitive. Behavior preservation: filename format, JSONL line shape, mkdir recursive, appendFileSync utf8, stderr-on-failure all byte-identical to the existing modules so their tests pass unchanged. resolveAuditDir() moves here from shell-audit.ts; shell-audit.ts will re-export for back-compat (T2). Honors GBRAIN_AUDIT_DIR with whitespace-trim, falls back to ~/.gbrain/audit/. Test coverage: 22 cases covering ISO-week math + year-boundary edges (2027-01-01 → 2026-W53), env override, mkdir-recursive, fail-open stderr-warn shape, cross-week readback, corrupt-row skip, non-finite- ts skip, round-trip with nested fields, computeFilename + resolveDir accessors. Plan ref: D5=B audit unification cathedral expansion. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 T2: refactor 5 audit modules onto shared writer Replace the duplicated ISO-week filename math + best-effort write loop + read-current-plus-previous-week loop in: - src/core/rerank-audit.ts (rerank-failures-*.jsonl) - src/core/audit-slug-fallback.ts (slug-fallback-*.jsonl) - src/core/minions/handlers/shell-audit.ts (shell-jobs-*.jsonl) - src/core/minions/handlers/supervisor-audit.ts (supervisor-*.jsonl) - src/core/facts/phantom-audit.ts (phantoms-*.jsonl) All five now delegate file I/O to createAuditWriter from T1. Public API preserved bit-for-bit: - logRerankFailure, readRecentRerankFailures, computeRerankAuditFilename - logSlugFallback, readRecentSlugFallbacks, computeSlugFallbackAuditFilename - logShellSubmission, computeAuditFilename, resolveAuditDir - writeSupervisorEvent, readSupervisorEvents, computeSupervisorAuditFilename plus isCrashExit, summarizeCrashes, CrashSummary (domain-specific helpers stay in supervisor-audit.ts; only file I/O moves) - logPhantomEvent, readRecentPhantomEvents, computePhantomAuditFilename Domain-specific behavior preserved: - audit-slug-fallback emits per-call stderr (D7 dual logging) in the caller; the shared writer is failure-only stderr - rerank-audit truncates error_summary to 200 chars before write - phantom-audit spreads optional fields conditionally (skip undefined) - supervisor-audit keeps single-file readback (no cross-week walk) to preserve pre-v0.40.4 doctor assertions resolveAuditDir lives in src/core/audit/audit-writer.ts; shell-audit.ts re-exports it so existing imports keep working (every other audit module + gbrain-home-isolation.test.ts + minions.test.ts + minions-shell.test.ts pull resolveAuditDir from shell-audit.ts). Operator-visible drift: rerank-audit stderr line drops the 'rerank-failure audit' qualifier — was '[gbrain] rerank-failure audit write failed (...)' now '[gbrain] write failed (...); search continues'. Stderr is human-debugging, not machine-parsed; the file written gives the qualifier away in `tail -f audit/*`. Test coverage: 128/128 audit-touching tests pass unchanged. Plan ref: D5=B audit unification cathedral expansion. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 T3: getAdjacencyBoosts engine method (PG+PGLite parity) Add BrainEngine.getAdjacencyBoosts(pageIds) returning Map<page_id, AdjacencyRow{hits, cross_source_hits}>. Returns ALL pages with hits >= 1 (callers apply their own threshold). Cross-source semantic (D15=A): cross_source_hits EXCLUDES the target page's own source. A page in source A linked from 2 pages in source A reports cross_source_hits = 0. Linked from 1 in source B + 1 in source C reports 2. Source-scope contract: pageIds MUST already be source-scoped by the caller. Method does NOT filter by source_id. The in-set restriction makes cross-source leakage impossible by construction. JSDoc spells this out; same trust posture as cosineReScore's chunk_id handling. COALESCE(p.source_id, 'default') on both target and from-page sides for defense-in-depth even though pages.source_id is NOT NULL today. JSDoc/SQL contract alignment (codex #2): HAVING >= 1 matches the "returns ALL pages with hits >= 1" contract; threshold of 2 is the caller's call in applyGraphSignals. Known limitation (codex #15): cross_source_hits cannot distinguish "genuinely linked from another team" from "mirrored imports from another source." T-todo-4 captures the v0.41+ refinement. SearchResult type extension (D4=A flat fields, D12=A attribution): - graph_adjacency_hits, graph_cross_source_hits, graph_session_demoted, graph_session_prefix - base_score, backlink_boost, salience_boost, recency_boost, exact_match_boost, graph_adjacency_boost, graph_cross_source_boost, session_demote_factor, reranker_delta All optional; T4-T6 populate them. Test coverage: 7/7 hermetic PGLite cases. Empty input, singleton, same-source hub, cross-source attribution including the "linked-only-from-other-source" case (widget in source b, linked from alice+bob in source a → cross_source_hits=1), JSDoc HAVING>=1 contract. Postgres parity asserted by SQL-shape identity (will get a mirror Postgres E2E in T10's eval gate work via DATABASE_URL when set; PGLite hermetic case shipped now). NULL source_id COALESCE branch noted as untestable in current PGLite schema (pages.source_id is NOT NULL); kept as defense-in-depth. Plan ref: T3 in v0.40.4.0 wave plan; D1=A, D3=A, D15=A. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 T4+T11: applyGraphSignals 4th stage in runPostFusionStages New file src/core/search/graph-signals.ts. Three signals: 1. Adjacency-within-top-K (×1.05): hits >= 2 inbound from in-set. 2. Cross-source adjacency (×1.10, stacks): cross_source_hits >= 2. Dormant on single-source brains. 3. Session diversification (×0.95): if multiple top-K share a slug prefix, keep highest scoring, DEMOTE the rest. NOT amplify — codex caught the original framing was backwards (amplification of redundancy makes the cited "weak chunks compete for budget" problem worse, not better). Conservative magnitudes (D14=B): 1.05/1.10/0.95. Score-distribution probe (onScoreDistribution) collects min/p25/p50/p75/p95/max + reorder_band_width to feed T-todo-2 magnitude calibration wave. Slot: 4th stage inside runPostFusionStages (hybrid.ts:248), AFTER backlink/salience/recency, pre-dedup. Inherits the v0.35.6.0 floor-ratio gate from computeFloorThreshold — this is the structural protection that prevents a low-cosine hub from outranking a strong non-hub (codex T2 / D1=A). PostFusionOpts extends with graphSignalsEnabled, onGraphMeta, onScoreDistribution. Caller (hybridSearch in subsequent T5 work) resolves graph_signals from the mode bundle. Source-scope contract preserved: getAdjacencyBoosts takes raw page_ids, no source filter. Adjacency is in-set restricted so cross-source leakage is impossible by construction (D3=A). Fail-open: engine throw → JSONL audit row via shared createAuditWriter (T1/T2 primitive, featureName='graph-signals-failures') + meta.errored + caller's results unchanged. Session diversification ALSO skips on failure (predictable all-or-nothing posture). Mutation note (codex #9): score mutated in place. base_score must be stamped at runPostFusionStages entry BEFORE this stage so eval-capture sees pre-boost score (T6 attribution wave). Test coverage (24 cases, including T11 IRON RULE regression): - sessionPrefix multi/single/empty cases - computeScoreDistribution percentile math - Disabled + empty short-circuits - Adjacency hit, no-hit, cross-source stacking, cross-source alone - Session diversification 3-share + single-segment + singleton - Test seam injection (no engine call) - Fail-open: throw → audit row + meta.errored + unchanged - Empty Map → session still runs - Score-distribution always emits when enabled - Meta carries fire counts + duration_ms - Missing page_id silently skipped from dedup set - **T11 IRON RULE regression (3 cases):** * weak hub BELOW floor_threshold does NOT get boosted past above-floor non-hub (the bug class the floor gate exists for) * hub AT floor still gets boosted (gate is < not <=) * NaN score → NaN >= threshold is false → no boost Plan ref: T4 + T11 in v0.40.4.0 wave plan; D1=A, D2=A, D11=B, D14=B, D9=A, D5=B. Codex outside-voice #1 + #2 + #6 + #8 + #9 addressed. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 T5: graph_signals mode-bundle knob + KNOBS_HASH bump 3→4 ModeBundle gains graph_signals: boolean. Per-mode defaults: - conservative: false (cost-sensitive tier) - balanced: true (the wave's primary surface for default-on) - tokenmax: true (power-user tier, capstone fit) SearchKeyOverrides + SearchPerCallOpts gain optional graph_signals field. resolveSearchMode picks via the standard per-call → config override → mode bundle chain. loadOverridesFromConfig parses 'search.graph_signals' from the config table ('1' or 'true' → true). SEARCH_MODE_CONFIG_KEYS adds the key so `gbrain search modes --reset` clears it alongside other knobs. KNOBS_HASH_VERSION bump 3→4 (append-only per CDX2-F13). New `gs=` parts entry appended AFTER cross-modal + column + prov entries. A graph-on cache write cannot be served to a graph-off lookup — mid-deploy hit-rate dip clears within cache.ttl_seconds (3600s). src/commands/search.ts KNOB_DESCRIPTIONS gains graph_signals entry so `gbrain search modes` dashboard renders the new knob. Test coverage: - test/search-mode.test.ts (+ 8 new cases): per-mode defaults canonical, config override both directions, per-call override wins, knobsHash distinct for on/off, config key registered, attributeKnob reports per-call + mode sources correctly. - test/search/knobs-hash-reranker.test.ts: version assertion bumped 3→4 with v0.40.4 rationale comment. - test/cross-modal-phase1.test.ts: version assertion bumped 3→4 with v0.40.4 rationale comment. - Canonical-bundle assertions updated to include graph_signals in expected shape (3 cases). 50/50 search-mode tests pass. 45/45 cross-modal pass. 17/17 knobs-hash-reranker pass. 10/10 balanced-reranker pass. Plan ref: T5 in v0.40.4.0 wave plan. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 T6: per-stage attribution stamping in every boost Every boost stage that mutates SearchResult.score now stamps a field recording WHAT it multiplied: - applyBacklinkBoost → backlink_boost (skipped when count == 0) - applySalienceBoost → salience_boost (skipped when score == 0) - applyRecencyBoost → recency_boost (skipped on evergreen prefix) - applyExactMatchBoost → exact_match_boost (skipped on no-match OR when intent's exactMatchBoost == 1.0 no-op) - runPostFusionStages → base_score stamped ONCE at entry, BEFORE any boost mutates r.score. Idempotent: caller-pre-stamped value preserved. Empty-results short-circuit unchanged. - applyReranker → reranker_delta = original_index - new_index (positive = rank improved; raw rerank score stays in rerank_score) - applyGraphSignals → graph_adjacency_boost, graph_cross_source_boost, session_demote_factor (T4 already stamped these) Why: feeds the T7 `gbrain search --explain` formatter so it can attribute the final score to its components. Without these stamps, "why did this rank where it did?" is grep-and-guess. SearchResult.reranker_delta doc updated to clarify it's a RANK delta (positive = improved), not a score delta. The raw relevance score stays in `rerank_score` (untyped, for back-compat with telemetry that already reads it). Test coverage: 16 new cases in test/search/attribution-stamping.test.ts. Pins: every boost stamps when it fires AND skips stamping when it doesn't (no false attribution on no-op stages). base_score idempotency preserved. reranker_delta computed correctly across rank-improved + rank-degraded cases. All 178/178 search tests pass (no regressions). Plan ref: T6 cathedral expansion in v0.40.4.0 wave plan; D12=A. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 T7: gbrain search --explain per-stage attribution New file src/core/search/explain-formatter.ts renders SearchResult[] as a multi-line breakdown of how the final score was formed: 1. people/alice (score=12.4) base=10.2 (rrf+cosine) + backlink ×1.08 + salience ×1.05 + adjacency ×1.05 (hits=3) + cross_source ×1.10 (other_sources=2) ↑ reranker rank +2 = final 12.4 Reads the boost_* / base_score / *_hits fields populated by T4 + T6. Empty path: "no boosts applied" when no stage stamped anything. Session demote rendered with `-` prefix (not `+`) so the demotion direction is visually distinct from boosts. CliOptions gains `explain: boolean`; parseGlobalFlags recognizes `--explain` anywhere in argv. cli.ts formatResult for `search` + `query` cases reads CliOptions.explain via the module-level singleton and routes to formatResultsExplain when set. Lazy import keeps the hot path narrow for the common non-explain case. Number formatting: 4-decimal precision, trailing zeros stripped ('1.0000' → '1', '0.1234' → '0.1234'). NaN preserved as 'NaN'. Test coverage: - test/search/explain-formatter.test.ts: 19 cases pin output format. Each boost type renders correctly, every-stage stacking composes, reranker_delta=0 doesn't render, empty list short- circuits, rank numbering 1-based, number formatting edge cases. - test/cli-options.test.ts: 3 new cases for --explain parsing (basic, absent default, any-argv-position). Existing CliOptions literals in test/cli-options.test.ts + test/thin-client-upgrade-prompt.test.ts updated for new required explain field. JSON envelope unchanged — the same attribution fields surface in existing --json output via JSON.stringify; no separate JSON formatter needed. Plan ref: T7 cathedral expansion in v0.40.4.0 wave plan; D12=A + D6=A. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 T8: doctor check graph_signals_coverage New checkGraphSignalsCoverage in src/commands/doctor.ts. Wired into both runDoctor (local engine) and doctorReportRemote (HTTP MCP / JSON path) so local AND remote-server brains both surface the metric. Logic: 1. Resolve active graph_signals setting: config override 'search.graph_signals' wins, else mode bundle default ('search.mode' → conservative=false, balanced/tokenmax=true). 2. When disabled → silent ok ("disabled — coverage not checked"). Avoids polluting doctor output on installs that don't use the feature. 3. When enabled, compute global inbound-link density: COUNT(DISTINCT to_page_id) / COUNT(*) across non-deleted pages. 4. <10% → warn ("signal will rarely fire") with paste-ready `gbrain extract all` fix hint. 5. >=30% → ok ("fire on most queries") with metric. 6. 10-29% → ok ("fire occasionally") with metric. Known limitation (codex outside-voice #14): global density is an imperfect proxy for "top-K subgraphs have enough edges to fire." T-todo-5 captures the v0.41+ refinement that measures actual fire rate from search-stats after 30 days of data. Best-effort: SQL errors → warn with the underlying message. Never breaks doctor. Test coverage (7 new cases in test/doctor.test.ts): - conservative mode → silent ok regardless of coverage - balanced default + 0 links → warn at 0% with fix hint - balanced default + 40% inbound → ok "fire on most queries" - balanced default + 20% inbound → ok "fire occasionally" - explicit search.graph_signals=false overrides mode default - empty brain → ok with explanation - check is wired into runDoctor (source-grep regression guard) All 55/55 doctor.test.ts cases pass. Plan ref: T8 in v0.40.4.0 wave plan; D6=A. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 T9: gbrain search stats graph_signals section runStatsSubcommand in src/commands/search.ts gains a graph_signals section in both --json and human output: Graph signals: enabled: true (mode default) failures: 3 fail-open event(s) ECONNREFUSED 2 timeout 1 Data sources: - config: 'search.graph_signals' override → enabled + source=config, otherwise mode-bundle default → enabled + source=mode_default. - JSONL audit: readRecentGraphSignalsFailures(days) returns events; failures_count is len, failures_by_reason buckets by first word of error_summary (e.g. 'ECONNREFUSED', 'timeout'). JSON envelope (schema_version 2 unchanged; graph_signals is a new sibling property of stats, so consumers reading the existing fields keep working): { "schema_version": 2, ...stats..., "graph_signals": { "enabled": bool, "source": "config" | "mode_default", "failures_count": int, "failures_by_reason": { reason: count } }, "_meta": { metric_glossary: { ..., graph_signals_enabled: ..., graph_signals_failures_count: ... } } } Fire-rate metrics (adjacency_fires, cross_source_fires, session_demotions) and score-distribution stats are NOT in this section yet — they require telemetry-table writes from the applyGraphSignals onMeta callback. Wired in v0.41+ via T-todo-2 calibration wave (the wave that needs them). For v0.40.4: status + error count is the actionable surface for "is graph_signals on, and is it failing?" Human output: prints the section after the existing stats block. Edge case: when total_calls is 0 BUT graph_signals is enabled OR has historical failures, still prints the section so operators don't lose the signal on a brain with no telemetry yet. Test coverage (6 cases in test/search/search-stats-graph-signals.test.ts): - search.graph_signals=true → enabled true, source=config - mode=conservative → enabled false, source=mode_default - no config → enabled true (balanced default), source=mode_default - JSONL failures bucketed by first word of error_summary - empty audit → failures_count 0, empty failures_by_reason - human output includes "Graph signals:" header Plan ref: T9 in v0.40.4.0 wave plan; D6=A. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 T10: eval gates (longmemeval-mini A/B + paired bootstrap) New test/e2e/graph-signals-eval.test.ts runs each longmemeval-mini question twice (graph_signals off, graph_signals on) and asserts: Gate 1 (QUALITY) — paired bootstrap, 10,000 resamples: - If signals-on is significantly WORSE than off (delta < 0 AND p < 0.05) → fail. - Otherwise pass. p>=0.05 either direction OR delta >= 0 → ok. Gate 2a (CHANGE-MAGNITUDE): mean Jaccard@5 over result-set overlap must be >= 0.5. If results overlap less than half, the change is too large and needs human review before default-on. Gate 2b (CHANGE-MAGNITUDE): top-1 stability rate >= 0.7. If 30%+ of top picks change, hard look required. Gate 3 (HARD ABSOLUTE FLOOR): recall@5 drop <= 5pt. Catastrophic regression catch (codex outside-voice #18 — addresses the "top-5 must not drop at all" brittleness on tiny fixtures). Bootstrap implementation: - Per-question observation is binary (recall@5 hit/miss). - Paired pairing on question_id between on/off branches. - Centered distribution under null (subtract observed mean) per standard paired-bootstrap-shift approach for binary outcomes. - Two-tailed p-value: |resampled delta| >= |observed delta|. - Deterministic seeded RNG so test runs are stable across CI. pairedBootstrapPValue exported as a pure function with separate tests for edge cases (empty input, all-equal, strong positive, strong negative, determinism). Reusable from future calibration waves. Hermetic: in-memory PGLite via createBenchmarkBrain + resetTables between questions. No API keys needed (--no-embed import path exercises keyword-only retrieval). Skips gracefully via describe.skip when the fixture is missing. Plan ref: T10 in v0.40.4.0 wave plan; D7=C absolute floor + D13=A paired bootstrap; codex #4 + #18 stability-vs-quality distinction. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 T12: VERSION + package.json + CHANGELOG + TODOS VERSION: 0.37.11.0 → 0.40.4.0 package.json: 0.37.11.0 → 0.40.4.0 CHANGELOG.md: top entry for v0.40.4.0 in ELI10-lead voice per CLAUDE.md release rules. Lead is plain-English ("Your search now notices when a page is a hub for your query"); precise file paths / SQL semantics / numbers live in the "Itemized changes" section below. Includes the cathedral-expansion notes (D5=B audit unification, D12=A per-stage attribution, D13=A eval gates) and the "To take advantage of v0.40.4.0" verify-and-fix block. TODOS.md: 5 new items captured under "v0.40.4 graph signals — deferred follow-ups (v0.41+)": - T-todo-1: profile graph-signal SQL latency, merge if hot (D8=C) - T-todo-2: magnitude calibration wave from probe data (D14=B / D17) - T-todo-3: DB-backed audit table for cross-deploy observability (codex #15) - T-todo-4: sync-topology-aware cross-source signal (codex #11) - T-todo-5: replace doctor's global density with fire-rate (codex #14) Verified the 3-line audit: VERSION + package.json + CHANGELOG topmost all match 0.40.4.0. `bun install` ran (lockfile unchanged — root package version isn't stored in bun.lock). `bun run build:llms` refreshed llms.txt + llms-full.txt for the next commit. Plan ref: T12 in v0.40.4.0 wave plan. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 TODO: document pre-existing shard-2 flake noticed during ship 3 isCacheSafe test failures in shard 2 reproduce on stashed clean master. Confirmed pre-existing — not introduced by v0.40.4. Filed under "Pre-existing flake on master (noticed during v0.40.4 ship)" with reproduction commands + remediation options. Shipping v0.40.4 through it; future wave can fix. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 privacy scrub: replace wintermute → media in example slugs CLAUDE.md line 550 bans the private OpenClaw fork name in public artifacts. Example session prefix in sessionPrefix() docs + 3 test fixtures swept to 'media/chat/...' instead. Pre-existing scripts/check-privacy.sh in `bun run verify` caught it. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 fix: wire graph_signals from mode bundle to runPostFusionStages CRITICAL: pre-landing review (codex outside-voice via /ship Step 9) caught that hybrid.ts's `postFusionOpts` literal at line 566 was building PostFusionOpts WITHOUT threading `resolvedMode.graph_signals` to `graphSignalsEnabled`. The gate at hybrid.ts:358 read the field from a literal that never set it. Result before this fix: the entire v0.40.4 graph-signals wave was dead code in production. Mode bundles set `balanced.graph_signals = true` and `tokenmax.graph_signals = true`, but no production call site ever reached applyGraphSignals. The KNOBS_HASH bump 3→4 correctly varied the cache key by the flag, so contamination was prevented — but the feature itself never fired. All shipped infrastructure (engine SQL, fail-open audit, attribution stamps, --explain formatter, doctor coverage check, search-stats section) was reachable only through the unit-test seam (`opts.adjacencyFn`). The CHANGELOG-advertised behavior never landed in user-visible search. Fix: thread `graphSignalsEnabled: resolvedMode.graph_signals` into the postFusionOpts literal (1 line). Inline comment names codex's catch so future refactors see the regression class. Tests: new test/search/graph-signals-wire-integration.test.ts pins the wire end-to-end. Three cases: 1. balanced mode → hybridSearch on a seeded brain with adjacency hub produces a result with base_score stamped (proves runPostFusionStages actually ran). 2. search.graph_signals=false config override → no graph_* fields stamped (proves the gate honors the override path). 3. Source-grep regression guard pinning the `graphSignalsEnabled: resolvedMode.graph_signals` literal in hybrid.ts so a future refactor can't silently disconnect. All 57 existing v0.40.4 wave tests still pass. Typecheck clean. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 fix: pre-landing review AUTO-FIX findings (audit msg drift + deleted_at) Two informational findings from /ship pre-landing review (Step 9): 1. Stderr message qualifier drift (rerank/slug-fallback/phantom audits) Pre-v0.40.4 messages included a per-feature qualifier: [gbrain] rerank-failure audit write failed (...) [gbrain] slug-fallback audit write failed (...) [gbrain] phantom audit write failed (...) The T2 refactor dropped the qualifier (plan promised "byte-identical" operator-visible behavior, but stderr lines did drift). Restored via new `errorMessagePrefix` option on `createAuditWriter` (optional, '' default). Three modules pass the per-feature qualifier; shell-audit and supervisor-audit unaffected (their pre-v0.40.4 messages didn't have a separate qualifier — label already carried the feature name). 2. Defense-in-depth `deleted_at IS NULL` on getAdjacencyBoosts SQL was previously protected by-construction (hybridSearch's visibility filter ensures input pageIds are live), but matches the v0.35.5.0 findOrphanPages pattern and closes the bug class if a future caller bypasses hybridSearch. Added to both Postgres and PGLite engines for parity. Three JOIN sites guarded (targets CTE, FROM-pages join). One inline comment per engine cites the codex review and the v0.35.5.0 precedent. Plan ref: /ship pre-landing review v0.40.4.0 (codex finding C and F). All 84 audit+graph-signals tests pass. Typecheck clean. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 fix: adversarial review HIGH findings (codex H1+H2 + Claude F1) Three HIGH-severity issues from /ship adversarial pass: H1 (Codex): Eval gate was a no-op. Test passed `graph_signals: graphSignalsOn` via `as any` cast, but SearchOpts had no field and hybridSearch's perCall didn't thread it. Both off/on branches resolved to the mode-bundle default — gate measured identical behavior, could pass while detecting nothing. Fix: add `graph_signals?: boolean` to SearchOpts (types.ts:794). Thread `opts.graph_signals` into perCall in both hybridSearch (hybrid.ts:425) AND hybridSearchCached (hybrid.ts:1027) so the cache-key resolver also sees the override. Drop the `as any` from the eval test — types are real now. H2 (Codex): Session diversification fired on entity directories. sessionPrefix() used "any shared parent directory" as the session signal. Result: a search for "people in SF" returned `people/alice` + `people/bob` + `people/charlie` and the latter two got demoted to 0.95×. Every common entity-search query silently penalized legitimate same-type results. Default-on for balanced/tokenmax means production behavior was wrong. Fix: narrow sessionPrefix() to fire ONLY when the slug contains a session-like marker (`chat`/`session`/`sessions` segment OR a `YYYY-MM-DD` date segment). Entity directories (`people/`, `companies/`, `docs/`) return null → diversification skips. Returns NULL (not the slug itself) so the loop skips clean. Examples in JSDoc: your-agent/chat/2026-05-20-foo → 'your-agent/chat/2026-05-20-foo' daily/2026-05-20/journal-entry-1 → 'daily/2026-05-20' transcripts/chat/funding-discussion → 'transcripts/chat/funding-discussion' people/alice → null ← codex H2 regression docs/quickstart → null F1 (Claude adversarial subagent): case-sensitivity drift across 3 sites. loadOverridesFromConfig in mode.ts is case-insensitive + whitespace-trimmed for 'search.graph_signals' values. But doctor's checkGraphSignalsCoverage (doctor.ts:899) AND search-stats's readGraphSignalsStats (search.ts:288) used case-sensitive compare. User sets `search.graph_signals TRUE`: production enables the feature, but doctor + search-stats both silently report disabled. Operators lose the only observability surface for the new feature on values like 'True'/'TRUE'. Fix: trim + lowercase parity at both sites. Mirror the parser's semantic. Also case-normalized `search.mode` reads at both sites for the same divergence class. Tests: - sessionPrefix block rewritten with 7 cases covering chat marker + date anchor + entity dirs (now-NULL) + degenerate (no /). - Added regression test pinning codex H2: people/alice + people/bob + people/charlie do NOT get diversified. - graph-signals-eval.test.ts drops `as any` — typed field works. - Existing tests using `chat/a`/`chat/b` updated to session-shaped `media/2026-05-20/chunk-a` so the date anchor actually fires. 111/111 graph-signals + doctor + search-stats tests pass. Typecheck clean. Plan ref: /ship adversarial review v0.40.4.0 (codex H1, H2; Claude F1). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.40.4.0 TODOs: capture 11 LOW adversarial findings for v0.41+ Codex L1 (audit window underreport) + Claude F2/F3/F5-F8/F11/F12/F14/F16 from /ship adversarial review. None are load-bearing; all captured under 'v0.40.4 adversarial review LOW findings — captured for v0.41+'. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: update project documentation for v0.40.4.0 - README: surface v0.40.4.0 graph signals + --explain in Hybrid search capability - CLAUDE.md: annotate engine.ts getAdjacencyBoosts, new graph-signals.ts / explain-formatter.ts / audit/audit-writer.ts, plus hybrid.ts post-fusion 4th stage, mode.ts graph_signals knob + KNOBS_HASH 3→4, cli-options.ts --explain flag, search stats + doctor coverage check - llms-full.txt: regenerated from CLAUDE.md per the build:llms chaser rule Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> * fix(ci): pin bun-version to 1.3.13 across all workflows setup-bun action with `bun-version: latest` calls the GitHub API (https://api.github.com/repos/oven-sh/bun/git/refs/tags) to resolve the tag. CI started failing today with HTTP 401 "Bad credentials" even though the action receives a token (visible as `token: ***` in the run log). Pinning the version eliminates the API call entirely. Affected workflows: test.yml, e2e.yml, release.yml, heavy-tests.yml (5 invocations total). Pinned to 1.3.13 — matches package.json engines (`bun >= 1.3.10`) and the version v0.40.4.0 was developed against. Bump cadence: when a new bun version is required, update this pin in one PR. Trading "always-latest" for "always-deterministic" is the right trade for a 5-shard CI matrix. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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a19ee8bafe |
v0.40.2.0 feat: trajectory routing for temporal + knowledge_update (gbrain think + LongMemEval) (#1296)
* feat(facts): add event_type column + trajectory-format helper (v0.40.2.0 Commit 1)
Substrate work for v0.40.2.0 Track B (trajectory routing for temporal +
knowledge_update). This commit lands the schema + the shared formatter;
think wiring + LongMemEval extractor + intent routing come in Commits 2-4.
Migration v81 (facts_event_type_column):
ALTER TABLE facts ADD COLUMN event_type TEXT (nullable, metadata-only).
Lets the v0.35.4 typed-claim substrate carry event-shaped rows
(event_type='meeting'/'job_change'/'location_change') alongside the
metric-shaped rows (claim_metric/claim_value etc) it has carried since
v67. Temporal-reasoning questions ("when did I last meet Marco") need
the event shape; the metric shape doesn't fit them.
Engine changes (pglite + postgres parity):
- TrajectoryPoint.event_type: string | null added; projection in both
findTrajectory SQL paths returns the column.
- TrajectoryOpts.kind?: 'metric' | 'event' | 'all' added (default 'all').
Defensive opt that future-proofs filtering once event rows accumulate.
- Both engines apply the new kind filter at SQL level when set.
Back-compat (codex outside-voice concern):
Existing callers (founder-scorecard, eval-trajectory) already defensively
skip metric === null rows in their per-metric math. Event-only rows
(metric=NULL, event_type='meeting') ride through invisibly to those
callers — verified by the new regression test that asserts byte-identical
computeFounderScorecard + computeTrajectoryStats output with and without
event rows in the input. Both callers now pass kind:'metric' explicitly
for call-site clarity (no behavior change).
MCP find_trajectory op:
- event_type added to the wire-shape map.
- kind param added to the op declaration (enum metric/event/all).
Shared formatter (src/core/trajectory-format.ts, new):
formatTrajectoryBlock(points, entitySlug, opts) — sibling shape to
renderTakesBlock + renderChatBlock. Groups by (metric ?? event_type).
Per-metric cap 20, total cap 100 (prompt-budget guardrail). For
knowledge_update intent, annotates value-change rows with
"(superseded prior)" — the explicit signal codex flagged was missing
from default RRF-ordered retrieval. Promoted to src/core/ so both
gbrain think (Commit 2) and the LongMemEval harness (Commit 4)
consume one source of truth.
Prompt-injection coverage (codex Problem 10):
src/core/think/sanitize.ts INJECTION_PATTERNS extended with three
new entries — close-trajectory, open-trajectory, xml-attr-inject —
so adversarial </trajectory> sequences in extracted text get
escaped before reaching the model. Parity with the existing
</take> coverage.
Tests (all hermetic, no DATABASE_URL):
- test/trajectory-format.test.ts (17 cases, all green): grouping,
caps, sanitization, supersession annotation, determinism,
provenance, text-cap, adversarial </trajectory> escape.
- test/engine-parity-event-type.test.ts (6 cases): PGLite round-trip
of the column + kind filter matrix.
- test/regressions/v0_40_2_0-trajectory-backcompat.test.ts (4 cases):
pins the byte-identical-output contract that founder-scorecard's
per-metric math ignores event rows.
- test/migrate.test.ts: v81 round-trip verified via existing
structural assertion harness.
- 209 tests across 5 impacted suites pass; bun run verify clean
(17 pre-checks including privacy, jsonb, type, fuzz purity).
Plan: ~/.claude/plans/system-instruction-you-are-working-crystalline-owl.md
GSTACK REVIEW REPORT: CEO + ENG + CODEX CLEARED.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(think): trajectory injection for temporal + knowledge_update (v0.40.2.0 Commit 2)
Wires the v0.40.2.0 substrate (Commit 1's facts.event_type column +
formatTrajectoryBlock) into the production `gbrain think` surface.
Default ON; flip `think.trajectory_enabled=false` to opt out.
New pure modules (zero engine dependency):
- src/core/think/intent.ts — classifyIntent(question): regex-first
routing into 'temporal' | 'knowledge_update' | 'other'. KU wins over
temporal when both match. The 'other' fast path short-circuits with
zero SQL.
- src/core/think/entity-extract.ts — extractCandidateEntities() pulls
high-precision candidates from retrieval slugs (people/, companies/,
organizations/, deals/) and medium-precision noun phrases from the
question. Word-level tokenization + stop-word boundaries stitch
"Blue Bottle" as one candidate while splitting "I last meet Marco"
correctly. Leading-verb stripper drops "meet", "visit" etc so
"marco" surfaces cleanly. Cap of 5 per question.
Engine-touching wiring (src/core/think/index.ts):
- RunThinkOpts gains 4 fields: withTrajectory (default true),
sourceId, allowedSources, remote.
- readThinkTrajectoryEnabled() reads the config kill switch; default
true; survives missing config table on legacy brains.
- Trajectory orchestration sits between gather and prompt assembly:
intent classify → extract candidates → per-candidate
resolveEntitySlugWithSource → skip fallback_slugify → 5s timeout
Promise.race + 3-wide concurrency cap → formatTrajectoryBlock.
Any error degrades to "no block" + TRAJECTORY_INJECTION_FAILED
warning; the think call itself never crashes from trajectory.
- On success, TRAJECTORY_INJECTED_<N>_POINTS warning records the
count for downstream telemetry.
Prompt placement (src/core/think/prompt.ts) — Codex Problem 6 fix:
buildThinkUserMessage's trajectoryBlock slot honors BOTH existing
orderings — calibration mode inserts trajectory between calibration
and question; default mode inserts between retrieval and the output
instruction. NO third ordering is introduced. Empty trajectoryBlock
skips the "Known trajectory:" header entirely (don't cue the model
we tried).
Resolution-source signal (src/core/entities/resolve.ts) — Codex Problem 5:
New companion resolveEntitySlugWithSource() returns
{slug, source: 'exact_page' | 'fuzzy_match' | 'fallback_slugify'}
so trajectory routing can skip fallback-only resolutions —
querying findTrajectory on an invented slug always returns [] and
wastes a SQL round-trip. The original resolveEntitySlug keeps its
contract for pre-v0.40 callers.
MCP think op handler (src/core/operations.ts):
Extracts sourceScopeOpts(ctx) into scalar sourceId + allowedSources
+ remote, threads through to runThink. CLI callers omit (engine
default source, remote=false). Mirrors the same source-scope
discipline applied to all other read paths in v0.34.1.0.
Sanitization (Commit 1 already extended INJECTION_PATTERNS for
</trajectory> — consumed here).
Test coverage (all hermetic, no DATABASE_URL, no API keys):
- test/think-intent.test.ts (14 cases) — temporal, KU, other,
precedence (KU wins when both match), defensive non-string inputs.
- test/think-entity-extract.test.ts (10 cases) — retrieved-slug
source, noun-phrase source, stop-word stripping, leading-verb
stripping, dedup across sources, 5-candidate cap.
- test/think-trajectory-injection.test.ts (7 cases against PGLite
in-memory) — temporal intent injection happy path with superseded-
prior annotation, "other" intent short-circuit, withTrajectory:
false bypass, think.trajectory_enabled=false config bypass,
empty-trajectory skip, engine.findTrajectory throw is caught
(Promise.allSettled defense), TRAJECTORY_INJECTED warning count.
- Existing test/think-pipeline.serial.test.ts re-asserted unchanged
(10 cases — calibration mode parity, gather, sanitization,
cite-render all intact).
72 tests pass across 7 impacted suites; bun run verify clean (17 pre-
checks). Defaulted on per CEO + Eng D1; kill switch via config.
Plan: ~/.claude/plans/system-instruction-you-are-working-crystalline-owl.md
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(longmemeval): inline Haiku claim extractor + content-hash cache (v0.40.2.0 Commit 3)
Populates the LongMemEval benchmark brain's facts table inline at
import time so Commit 4's intent routing has data to retrieve. Per the
CHANGELOG D1 decision, this is full-haystack preprocessing — disclosed
explicitly in the benchmark output's methodology_note field (Commit 4).
New module src/eval/longmemeval/extract.ts:
extractAndInsertClaims({engine, client, model, sessionSlug,
sessionId, sessionBody, sourceId, aliasMap})
- Hashes the session body (sha256) for cache lookup.
- Cache hit → reuses parsed claims (cuts a 3-iteration benchmark
run from $1.50 to $0.50 when sessions repeat across questions,
as they do in LongMemEval).
- Cache miss → one Haiku call. System prompt asks for
{entity, metric, value, unit, period, event_type, valid_from, text}[]
JSON. New parseExtractedJsonArray() helper does fence-strip + parse
(parseModelJSON from cross-modal-eval is shaped for scored objects,
not arrays — different parser needed here).
- Per-record validateClaim() drops malformed records (missing
entity, bad date) silently; the rest land in NewFact rows.
- Per-question AliasMap (Codex Problem 4 — semantics pinned):
"Marco" + "Marco Smith" + "marco" in the SAME question collapse
to one slug via first-mention-wins canonicalization. Across
questions, the harness creates a fresh map (no leak).
- Real-page-aware entity resolution via the v0.40.2.0
resolveEntitySlugWithSource (Commit 2). Slugify-fallback rows
still insert (we need the data); the resolution_source signal
is only consulted at trajectory retrieval time (Commit 4).
- Bulk insert via engine.insertFacts with the
`gbrain-allow-direct-insert` allow-list comment per the
check-system-of-record CI guard contract — benchmark brain is
ephemeral in-memory PGLite, no markdown source-of-truth applies.
- Fail-open posture: Haiku throw, malformed JSON, insert collision
all return inserted=0 without throwing. One bad session never
kills the per-question loop.
- getCacheStats() exposes hits/misses/size for the per-run stderr
telemetry Codex Problem 14 asked for (empirical hit-rate
reporting; the optimistic claim self-verifies).
Substrate plumbing (extends Commit 1):
- NewFact.event_type?: string | null added in engine.ts so the
extractor can pass event-shaped rows through to insertFacts.
- PGLite engine + Postgres engine insertFacts() now persist
event_type. Param-positional dispatch extended to 20/21 placeholders
(null-embedding vs embedding-present); tx.unsafe vector cast on
Postgres path unchanged.
Test coverage (test/longmemeval-extract.test.ts, 13 cases, hermetic):
- Happy path: typed-claim + event rows both insert with correct
kind (event_type='meeting' → kind='event'; claim_metric='mrr'
→ kind='fact').
- Alias map: per-session collapsing ("Marco" + "Marco Smith"),
cross-session persistence within one question, fresh map per
question (caller-clears semantics pinned).
- Content-hash cache: identical body → cache hit, only ONE Haiku
call across two sessions; different bodies miss; getCacheStats
reports hits/misses/size.
- Fail-open: malformed JSON, Haiku throw, empty array output,
invalid records (missing entity, bad date) — none crash; 0
inserted in each case.
55 tests pass across 4 impacted suites; bun run verify clean.
Plan: ~/.claude/plans/system-instruction-you-are-working-crystalline-owl.md
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(longmemeval): trajectory intent routing + prompt splice + methodology disclosure (v0.40.2.0 Commit 4)
The final wiring: per-question intent classification + trajectory call
+ block splice into the answer-gen prompt. Plus the methodology
disclosure stamps that close out the Codex D1 contract.
New module src/eval/longmemeval/intent.ts:
classifyIntent(q): prefers q.question_type from the dataset
(LongMemEval ships labels like 'temporal-reasoning',
'knowledge-update', 'single-session-user') before falling back to
the SHARED regex set imported from src/core/think/intent.ts.
Single source of truth for the regex — think and longmemeval
cannot drift.
Harness wiring in src/commands/eval-longmemeval.ts:
- runEvalLongMemEval() spawns an extractor model via resolveModel
(tier:'utility' → haiku) when trajectory routing is enabled.
Calls resetExtractorState() once per benchmark run so the
content-hash cache + counters start clean.
- runOneQuestion() creates a FRESH per-question AliasMap (Codex
Problem 4 — first-mention-wins canonicalization stays scoped to
one question, never leaks across).
- Per session: after importFromContent lands, extractAndInsertClaims
populates the facts table. Fail-open if the Haiku call errors;
next session keeps going.
- After hybridSearch returns: classifyIntent(q) routes
temporal/knowledge_update through extractCandidateEntities (the
SHARED helper from Commit 2's think/entity-extract) → per-candidate
findTrajectory with 5s Promise.race timeout → formatTrajectoryBlock.
First candidate with a non-empty trajectory wins.
- generateAnswer() splices the trajectory block BEFORE the
Retrieved sessions block. Empty block (no entity match / no
points) → no "Known trajectory:" header (don't cue the model
we tried).
- JSON envelope gains 5 fields per question when trajectory routing
is on: intent, trajectory_points, entity_resolved,
resolution_source, methodology_note. methodology_note also
written to stderr at run completion.
Resolution-source gate DIVERGES from think (intentional):
In the think production path, fallback_slugify results are skipped
because querying invented slugs wastes SQL — production brains have
canonical pages. In the LongMemEval benchmark, there ARE no
canonical pages; both the extractor and the lookup go through
slugify-fallback on the same free-form name, so they cohere on the
same slug. Applying the think-path gate here would permanently
block trajectory injection on the benchmark. Comment in
runOneQuestion documents the divergence.
New CLI flag --no-trajectory:
Bypasses BOTH the Haiku extractor AND the per-question intent
routing. Used by the measurement protocol to baseline default-on vs
no-trajectory across 3 seeds per condition with paired-bootstrap
CI. Documented in the help text.
New RunOpts fields:
- extractorClient?: ThinkLLMClient — separate stub from the
answer-gen client so tests can isolate the two surfaces.
- extractorModel?: string — model override for the Haiku call.
methodology_note = 'extractor=haiku-preprocess-full-haystack-v1'
stamped on:
- Every per-question JSON envelope row.
- Stderr summary at run completion.
This is the Codex D1 contract: the temporal-reasoning delta we
publish is "gbrain + Haiku-preprocess pipeline" vs "gbrain alone",
not directly comparable to LongMemEval's published baselines
without that disclosure.
Extractor cache hit-rate stderr summary (Codex Problem 14):
'[longmemeval] extractor.cache_hits: 412 / 489 sessions (84.2%,
cached_bodies=412)' — empirical verification of the optimistic
hit-rate claim. The optimistic number self-verifies per run.
Test coverage (all hermetic, no API keys):
- test/longmemeval-intent.test.ts (9 cases) — dataset
question_type → Intent mapping for all six LongMemEval labels;
dataset label trumps question-text signal; unknown labels fall
through to the regex classifier.
- test/longmemeval-trajectory-routing.test.ts (4 cases) —
end-to-end through runEvalLongMemEval with both clients stubbed:
trajectory block lands in answer-gen prompt for temporal
intent + absent for 'other'; --no-trajectory bypasses extractor
AND injection AND omits envelope fields; methodology_note
stamped on every routed row; perf gate preserved (< 10s for
2-question fixture).
118 tests pass across 11 impacted suites; bun run verify clean.
Wave complete. CHANGELOG draft + measurement plan live in the plan
file. v0.40.2.0 ready for /ship after a real-LLM spot-check run.
Plan: ~/.claude/plans/system-instruction-you-are-working-crystalline-owl.md
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore: bump version and changelog (v0.40.2.0)
v0.40.2.0 trajectory routing wave — gbrain think now grounds answers
about temporal/knowledge-update questions in the typed-claim timeline
the brain has been quietly building via the extract_facts cycle phase.
Default ON; flip think.trajectory_enabled=false to opt out.
LongMemEval-side wiring lands the same plumbing in the benchmark
harness with explicit methodology disclosure (extractor=haiku-preprocess-
full-haystack-v1) in the JSON envelope and stderr summary — the published
temporal-reasoning number is "gbrain + Haiku-preprocess" vs "gbrain alone",
not directly comparable to LongMemEval's published baselines without that
disclosure.
Plan: ~/.claude/plans/system-instruction-you-are-working-crystalline-owl.md
3 review passes: CEO + ENG + CODEX all CLEARED.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: sync project docs for v0.40.2.0 trajectory routing
CLAUDE.md, README.md, AGENTS.md extended with the v0.40.2.0 trajectory
routing surface: gbrain think integration (default ON via
think.trajectory_enabled config key), facts.event_type schema column +
TrajectoryPoint.event_type + TrajectoryOpts.kind filter, shared
formatTrajectoryBlock helper in src/core/trajectory-format.ts,
LongMemEval extractor + intent routing + methodology disclosure,
migration v82.
llms-full.txt regenerated to match CLAUDE.md edits (CI test/build-llms
gate).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* test: fill v0.40.2.0 unit + e2e gaps (71 new tests across 7 gap areas)
Audit of the trajectory-routing wave's test surface vs the shipped
code surfaced 7 gaps. All filled, all green. Total: 343 tests across
17 impacted suites (was 272 pre-fill).
Gap 1 — Migration v86 structural tests (11 new in test/migrate.test.ts):
- v86 entry exists with documented name + idempotent
- exactly one event_type column add to facts
- IF NOT EXISTS guard
- column is nullable (no NOT NULL, no DEFAULT regression guard)
- does NOT create any index (event_type is selectivity-poor)
- does NOT touch any other table (blast-radius pin)
- does NOT carry a sqlFor override (engine-shared SQL contract)
- PGLite round-trip: column exists with right type + nullable
- event_type INSERT/SELECT round-trip
- NULL round-trip for legacy + metric-only rows
- LATEST_VERSION >= 86 contract pin
Gap 2 — resolveEntitySlugWithSource branch coverage (12 new in
test/entity-resolve.test.ts):
- exact_page branch (full slug, slug-shape match)
- fuzzy_match branch (Title-cased display name, bare first name via
prefix expansion)
- fallback_slugify branch (unseeded name, multi-word non-match
phrase, accented input)
- null tail (empty + whitespace)
- back-compat parity with resolveEntitySlug for both exact_page and
fallback_slugify branches
Gap 3 — INJECTION_PATTERNS dedicated coverage for new entries (18 new
in test/think-sanitize-trajectory.test.ts):
- close-trajectory entry registered + matches canonical and
whitespace/case variations
- open-trajectory entry registered + matches both no-attr and
with-attrs forms
- xml-attr-inject strips entity=/metric=/event_type=/kind=
- does NOT strip non-trajectory attribute names (class/id/title)
- combined multi-vector attack: all three patterns fire
- formatTrajectoryBlock end-to-end with adversarial extractor text:
one live </trajectory> (the wrapper, not the injection); one
entity= attribute (the wrapper, not the injection)
- pattern ordering invariant: new entries land after close-take
Gap 4 — runThink calibration-mode placement contract (3 new in
test/think-trajectory-injection.test.ts):
- default mode: question → pages → takes → trajectory → instruction
- calibration mode: pages → takes → calibration → trajectory →
question → instruction (Codex P6 — no third ordering invented)
- empty trajectory in calibration mode preserves the existing
calibration shape (no false-positive cue)
Gap 5 — runThink resolution_source != fallback_slugify gate (1 new
in test/think-trajectory-injection.test.ts):
- candidate that only matches via fallback_slugify is NOT queried
(think-path divergence from longmemeval-path which accepts it)
Gap 6 — E2E for runThink trajectory injection (7 new in
test/e2e/think-trajectory-pglite.test.ts):
- full pipeline lands <trajectory> block in answer-gen prompt
- knowledge_update intent annotates value-change rows with
(superseded prior)
- 'other' intent short-circuits (no block, no SQL)
- think.trajectory_enabled=false config bypasses entire path
- empty brain → graceful no-op (no crash, no block)
- multi-entity deterministic ordering
- adversarial </trajectory> in seeded fact text is escaped before
reaching the LLM (end-to-end sanitization gate)
Gap 7 — longmemeval extractor stress + persistence pins (6 new in
test/longmemeval-extract.test.ts):
- alias map cross-session stress with 12 sessions in one question;
all 12 rows collapse under ONE entity_slug
- different entities stay separate across many sessions
- embedding + embedded_at both NULL on benchmark-inserted rows
(regression guard against accidental embed-on-write)
- row_num sequential + source_markdown_slug stamped per session
(v0.32.2 partial UNIQUE index contract)
- source field stamped "longmemeval:extractor" (audit-tag pin)
- cache key invariance: same body hash hits cache across different
sessionId/slug
bun run verify clean (17 pre-checks). No regressions in any of the
14 non-new impacted suites.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* test: exempt facts.event_type from schema-bootstrap-coverage CI guard
The schema-bootstrap-coverage CI guard (test/schema-bootstrap-coverage.test.ts)
enforces that every ALTER TABLE ADD COLUMN in MIGRATIONS is covered by
applyForwardReferenceBootstrap OR by PGLITE_SCHEMA_SQL's CREATE TABLE
bodies OR by COLUMN_EXEMPTIONS.
v0.40.2.0's migration v87 adds facts.event_type but deliberately ships
without a bootstrap probe because:
- No CREATE INDEX in PGLITE_SCHEMA_SQL references event_type
- No FK references event_type
- All existing callers (founder-scorecard, eval-trajectory, gbrain
think trajectory injection) defensively skip NULL-metric rows in
per-metric math, so event_type=NULL on pre-v87 brains is invisible
- Pre-v87 brains land event_type=NULL via the migration ALTER
Exactly mirrors the precedent set by facts.claim_metric / claim_value /
claim_unit / claim_period exemptions (v67 typed-claim columns) which
are exempted for the same structural reason: column-only migration,
no forward-reference index, no downstream filter breaks on old brains.
Adding facts.event_type to COLUMN_EXEMPTIONS with a brief rationale
comment matching the existing v0.35.6 entry shape.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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3de06b6c29 |
v0.38.2.0 fix(doctor): bounded frontmatter scan + partial-state surfacing (supersedes #1287) (#1297)
* fix(frontmatter): prune vendor dirs at descent + bounded wall-clock with partial-state surfacing Two production-grade fixes for the v0.38.2.0 wave (supersedes PR #1287). Root cause Fix 1 (the bug that hung gbrain doctor on 216K-page brains): both brain-writer.ts:walkDir and frontmatter.ts:collectFiles recursed into every subdirectory without calling pruneDir, the canonical descent-time pruner used by sync/extract/transcript-discovery since v0.35.5.0. On brains that double as code workspaces, the walkers stat'd hundreds of thousands of entries under node_modules / .git / .obsidian / *.raw / ops that isSyncable filtered out at the leaf — paying the IO cost for nothing. Wiring pruneDir at descent (with the v0.37.7.0 #1169 submodule-gitfile check) eliminates the bulk of the wall-clock pain. Fix 2 (codex outside-voice C1): AbortSignal.timeout cannot interrupt the synchronous walker — readdirSync / lstatSync / readFileSync block the event loop, so timer callbacks never fire mid-walk. The load-bearing wall-clock bound is now a deadline check inside scanOneSource's visit callback (Date.now() > opts.deadline). AbortSignal still works at source boundaries. Shape changes (codex C2 + C4): - ScanOpts: + deadline?: number, + dbPageCountForSource hook, + visitDir test seam - PerSourceReport: + status: 'scanned' | 'partial' | 'skipped', + files_scanned, + db_page_count - AuditReport: + partial: boolean, + aborted_at_source: string | null - ok = grandTotal === 0 && !partial (a clean prefix from a timed-out scan no longer falsely reports clean) walkDir + collectFiles now exported with an optional visitDir callback for the regression suite. Production callers don't pass it. Tests: - test/brain-writer-walk-prune.test.ts (new, 12 cases): visitDir-based descent-time pruning assertions for both walkers. Pins the property output-based tests can't catch (isSyncable rejects vendor files at the leaf — so a test checking only output passes under the original bug). - test/brain-writer-partial-scan.test.ts (new, 5 cases): deadline + partial state + ok-after-abort + numerator/denominator coverage. Uses deadline, NOT AbortSignal, since codex C1 proved abort can't interrupt sync. - test/brain-writer.test.ts: existing "abort mid-scan" test refit to the new partial-state contract (per_source has 'skipped' entries instead of being empty — gives doctor visibility into which sources weren't checked). - test/migrations-v0_22_4.test.ts: AuditReport fixture extended with the new required fields. Plan + cross-model review: ~/.claude/plans/system-instruction-you-are-working-hidden-lollipop.md Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix(doctor): wire deadline + partial-state into frontmatter_integrity check Adopts the v0.38.2.0 ScanBrainSources surface in doctor's frontmatter_integrity check. - AbortSignal.timeout(fmTimeoutMs) for between-source bound. - deadline = Date.now() + fmTimeoutMs (the load-bearing mid-walk bound — codex C1 caught that AbortSignal alone can't fire inside the sync walker). - GBRAIN_DOCTOR_FM_TIMEOUT_MS env override (default 30000ms; invalid values fall back to default rather than crash). - Per-source DB denominator via SELECT COUNT(*) FROM pages WHERE source_id = $1 AND deleted_at IS NULL (codex C3: deleted_at filter so soft-deleted pages don't inflate the count). - Honest partial-render: "PARTIAL — scanned ~N files (source has ~M pages in DB), K issue(s) so far" instead of "scanned ~N of M pages" (codex C3 — the two populations are overlapping but not identical sets). - "NOT SCANNED (timeout — run gbrain frontmatter validate <id>)" per skipped source so the user knows which sources didn't get checked. - Catch block simplified to "unexpected error only" (codex D4 — the AbortError special case from PR #1287 was unreachable in a sync walker). Tests: test/doctor-frontmatter-partial.test.ts (new, 11 cases) — structural source-grep pins on every load-bearing render string plus the simplified- catch contract. Behavioral coverage is deferred to the heavy script (tests/heavy/frontmatter_scan_wallclock.sh, T6) because runDoctor calls process.exit unconditionally and can't be driven from bun:test directly; refactoring runDoctor to return rather than exit is a separate TODO. Plan + cross-model review: ~/.claude/plans/system-instruction-you-are-working-hidden-lollipop.md Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: v0.38.2.0 release notes, Phase 2 design sketch, heavy wall-clock smoke - CHANGELOG.md: ELI10-lead-first release entry per CLAUDE.md voice rules. Names the user-visible behavior change, the per-source partial render, the performance numbers table, the "things to watch" caveats. Credits @garrytan-agents for PR #1287's diagnosis. - VERSION + package.json: 0.37.11.0 -> 0.38.2.0. - docs/architecture/frontmatter-scan-incremental.md: Phase 2 design sketch for DB-backed scan state. Schema, migration shape, writer paths (sync-side UPSERT + incremental scan + autopilot cycle phase), doctor reader, sequencing concerns, two-phase rollout plan. Starting point for the follow-up PR — sub-second steady-state doctor needs incremental state, but the schema migration carries its own contract surface (forward-reference bootstrap, schema-drift E2E, PGLite-vs-Postgres parity) that deserves its own focused PR. - tests/heavy/frontmatter_scan_wallclock.sh (new, manual / nightly per tests/heavy/README.md): seeds a synthetic 60K-file brain (10K real + 50K under node_modules/) and asserts gbrain doctor completes in <15s with frontmatter_integrity: ok. Codex C7 caught that the original plan's 1500-file budget was too small to be a meaningful guard — at that scale the test passes BEFORE AND AFTER the fix, proving nothing. 60K is the minimum that catches the descent-into-vendor-trees regression. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: adversarial review followups — CLI hint, deadline-vs-await race, between-source breadcrumb Codex adversarial review caught 4 real bugs in the v0.38.2.0 wave. All four fixed before ship. #1 (user-facing): `gbrain frontmatter validate` takes a filesystem PATH, not a source id. Pre-fix the NOT SCANNED hint pointed users at `gbrain frontmatter validate src-a` — which would fail with "no such directory", breaking the very remediation this PR ships to give them. Fix: render `src.source_path` instead. #2 (correctness): between sources, `await dbPageCountForSource(src.id)` ran unchecked. A slow query could blow past the deadline, then scanOneSource was still called and returned `status='partial'` with `files_scanned=0` — misleading ("partial scan" when actually zero files were scanned). Fix: add a post-await deadline re-check; mark source + remainder as 'skipped' if the budget already burned. #3 (UX): when the outer-loop deadline check fired BETWEEN sources, `aborted_at_source` stayed null and the doctor message said "PARTIAL SCAN" with no source name. Fix: stamp `aborted_at_source` with the source we were about to start. #4 (correctness): the COUNT query had no per-call deadline. A wedged Postgres pool could make a single COUNT hang past the budget and defeat the wall-clock guarantee. Fix: Promise.race against the remaining deadline; on timeout, resolve null and the post-await re-check (#2) marks the source skipped. Tests: 3 new regression cases in brain-writer-partial-scan.test.ts pinning the fixed contracts (skipped-vs-partial under slow COUNT, hanging COUNT within deadline, aborted_at_source before any source starts). 8648 pass / 0 fail across the full suite. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(README): refresh production-brain stats — 8.2x pages, 5.6x people, 7.4x companies Pre-update line (months stale): "17,888 pages, 4,383 people, 723 companies, 21 cron jobs running autonomously, built in 12 days." Fresh counts from ~/git/brain (the wintermute production brain): - pages: 17,888 → 146,646 (8.2x) - people: 4,383 → 24,585 (5.6x) - companies: 723 → 5,339 (7.4x) - cron jobs running: 21 → 66 (113 total, 66 enabled per ~/git/wintermute/workspace/ops/cron-snapshot.json) Dropped "built in 12 days" — at 146K pages the initial-velocity claim is stale narrative that no longer matches the current scale story. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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26c54588fe |
v0.38.0.0 ingestion cathedral — gbrain capture + write-through + IngestionSource contract (#1275)
* feat(ingestion): v0.38 substrate — daemon + IngestionSource contract + 2 sources
The foundation for the ingestion cathedral (CEO+DX+Eng plan-reviewed).
Plan: ~/.claude/plans/system-instruction-you-are-working-ethereal-riddle.md
WHAT YOU CAN NOW DO
The IngestionSource public contract is locked. Skillpack publishers can
build third-party ingestion sources (Granola, Linear, Mail, voice, OCR,
etc.) and ship them through the v0.37 skillpack registry. The locked
surface lives at the new package subpaths:
import { IngestionSource, IngestionEvent } from 'gbrain/ingestion';
import { IngestionTestHarness, expectEvent } from 'gbrain/ingestion/test-harness';
Both subpaths are pinned by test/public-exports.test.ts — breaking either
is a major-version change.
WHAT THIS COMMIT BUILDS
Foundation:
- src/core/ingestion/types.ts (IngestionSource, IngestionEvent,
IngestionSourceContext, validateIngestionEvent, computeContentHash,
INGESTION_SOURCE_API_VERSION, INGESTION_CONTENT_TYPES)
- src/core/ingestion/dedup.ts (24h content-hash LRU, 5000-entry cap)
- src/core/ingestion/skillpack-load.ts (gbrain.plugin.json discovery for
third-party sources, api_version compat with paste-ready upgrade hints,
in-process trust model for v1)
- src/core/ingestion/daemon.ts (IngestionDaemon: in-process source
supervision sibling to v0.34.3.0 ChildWorkerSupervisor pattern, plus
validate -> dedup -> rate-limit -> dispatch pipeline + health surface)
- src/core/ingestion/test-harness.ts (publisher-facing test utility with
fake clock + in-memory event bus + expectEvent matchers + engine proxy
that throws on access so publishers know what they're depending on)
- src/core/ingestion/index.ts (barrel for gbrain/ingestion subpath)
First two built-in sources prove the abstraction:
- file-watcher (chokidar over the brain repo; 1s debounce; honors
pruneDir from src/core/sync.ts; symlinks rejected; Linux ENOSPC
surfaces a paste-ready sysctl hint at runtime)
- inbox-folder (~/.gbrain/inbox/ target for iOS Shortcuts / AirDrop /
Drafts; auto-archives processed files into .archived/YYYY-MM-DD/;
symlink rejection; world-writable dir warning; routes content-type by
extension)
Public exports surface (count 18 -> 20) pinned in:
- package.json exports map
- test/public-exports.test.ts EXPECTED_EXPORTS + count gate
- scripts/check-exports-count.sh baseline
ARCHITECTURE-LOCKED DECISIONS (from /plan-eng-review)
E1 webhook source process boundary: webhook source will live INSIDE
serve --http (NOT this daemon) when it lands in the next commit. Daemon
supervises only daemon-side sources.
E2 content-type processor execution: hybrid by size (inline <1MB,
Minion handlers >1MB). Processors land in a later commit.
E3 publisher TTHW: chokidar v4.0.3 across platforms; ephemeral PGLite
persistence and Linux inotify-limit doctor probe land in later commits.
E4 migration v80 (provenance columns) + forward-reference bootstrap:
lands with put_page write-through in a later commit.
DX-locked decisions (from /plan-devex-review):
- Source error semantics: throws bubble to daemon; supervisor backoff.
- IngestionTestHarness exported as gbrain/ingestion/test-harness.
- api_version field on gbrain.plugin.json with loud-fail on mismatch.
TESTS
192 cases across 8 test files, 0 failures:
- test/ingestion/types.test.ts (28 cases pinning the contract)
- test/ingestion/dedup.test.ts (15 cases for LRU + TTL + collision)
- test/ingestion/skillpack-load.test.ts (22 cases for manifest
validation + api_version compat + collision policy + module load)
- test/ingestion/test-harness.test.ts (24 cases for harness lifecycle +
clock + healthCheck + every expectEvent matcher)
- test/ingestion/daemon.test.ts (19 cases for supervision + dispatch
pipeline + health surface + per-source config + logger wrapping)
- test/ingestion/sources/file-watcher.test.ts (10 cases including
ENOSPC sysctl-hint surfacing)
- test/ingestion/sources/inbox-folder.test.ts (24 cases including
symlink rejection + world-writable warning + archive-loop-prevention)
- test/public-exports.test.ts (2 new cases for the new subpaths)
typecheck clean. bun run verify gate passes.
NEXT IN WAVE
Subsequent commits in this PR ship webhook source (serve --http route),
cron-scheduler refactor + OpenClaw credential auto-migrate, content-type
processors (PDF + image OCR + audio transcribe + video keyframe), put_page
write-through with serializePageToMarkdown DRY extract, migration v80
+ bootstrap probes, gbrain capture verb, publisher DX cathedral (init
scaffold extension + gbrain ingest test [--watch] + tail + validate),
daemon rename autopilot -> ingest with forever-alias, doctor inotify
probe on Linux, skillpack contract docs + reference pack.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(ingestion): webhook source — POST /ingest + ingest_capture Minion handler
Lands the v0.38 ingestion cathedral's webhook source. Per the
/plan-eng-review E1 decision, the webhook source lives INSIDE
`serve --http` (NOT the ingestion daemon) so there is no new IPC: the
HTTP route submits Minion jobs directly into the existing queue, and
the daemon supervises only daemon-side sources.
WHAT YOU CAN NOW DO
With `gbrain serve --http` running and an OAuth client minted, any
HTTP caller (Zapier, IFTTT, n8n, Make, Apple Shortcuts) can POST a
captured thought into the brain:
curl -X POST https://your-brain.example.com/ingest \
-H "Authorization: Bearer $TOKEN" \
-H "Content-Type: text/markdown" \
-d "# captured from my Shortcut"
The route auths via OAuth (write scope required), validates the
content-type, enforces a 1MB payload cap and per-IP rate limit
(100 events / 10s), submits an `ingest_capture` Minion job tagged
`untrusted_payload: true`, and returns 202 Accepted with the job id.
The job materializes the page under `inbox/YYYY-MM-DD-<hash6>` by
default (overridable via X-Gbrain-Slug header) so the user has a
predictable triage location.
WHAT THIS COMMIT BUILDS
- src/core/minions/handlers/ingest-capture.ts (new) — handler that
takes an IngestionEvent payload, resolves a slug via fallback chain
(job.data.slug -> event.metadata.slug -> inbox/<date>-<hash6>),
validates the event at the handler boundary, REJECTS binary
content_types with a paste-ready hint to install a processor
skillpack, and routes through importFromContent. Defaults
noEmbed: true (embed is a separate Minion job, matching the sync
handler's pattern).
- src/commands/jobs.ts — registers `ingest_capture` in
registerBuiltinHandlers alongside sync/embed/extract.
- src/commands/serve-http.ts — POST /ingest route with:
- OAuth write-scope gate via requireBearerAuth({requiredScopes:['write']})
- 100 events / 10s rate limiter (sibling to ccRateLimiter)
- Content-type allowlist: text/markdown, text/plain, text/html,
application/json; binary REJECTED with HTTP 415
- 1 MB payload cap (configurable via GBRAIN_INGEST_MAX_BYTES)
- Caller-overridable source identity via X-Gbrain-Source-Id /
X-Gbrain-Source-Uri / X-Gbrain-Content-Type / X-Gbrain-Slug
headers — useful for downstream tools that want clean provenance
- untrusted_payload: true ALWAYS (network input)
- Idempotency on (client_id, content_hash) so simultaneous retries
collapse to one job
- maxWaiting: 50 per client so a runaway integration can't
monopolize the queue
- Audit row in mcp_request_log + SSE broadcast for the admin feed
TESTS
test/ingestion/ingest-capture.test.ts (15 cases against PGLite):
- defaultSlugForEvent helper (3 cases pinning shape + UTC + determinism)
- slug resolution fallback chain (3 cases)
- validation + content-type routing (5 cases including binary rejection
+ untrusted_payload round-trip)
- importFromContent integration (3 cases including content_hash dedup
via status='skipped' on repeat)
207 total ingestion tests passing. typecheck clean.
NEXT IN WAVE
cron-scheduler refactor + OpenClaw credential auto-migrate; content-type
processors (PDF + image OCR + audio transcribe + video keyframe);
put_page write-through + serializePageToMarkdown DRY extract +
migration v80 + bootstrap probes; gbrain capture verb; publisher DX
cathedral (init scaffold + gbrain ingest test --watch + tail + validate);
daemon rename autopilot -> ingest with forever-alias; doctor inotify
probe; skillpack contract docs + reference pack + VERSION bump.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(ingestion): put_page write-through + migration v80 + DRY extract
WHAT YOU CAN NOW DO
The drift class is dead. Every `gbrain put_page` (CLI or MCP, local
or remote) now lands its markdown file on disk alongside the DB row
whenever `sync.repo_path` is configured. The page is queryable
immediately AND visible to git, your editor, and downstream tools.
Pre-v0.38, put_page wrote ONLY to the DB and synthesize/extract paths
had to reverse-render later. The v0.35.6.0 phantom-redirect pass was
the cleanup for what THIS commit prevents in the first place.
# local CLI
gbrain put inbox/test < my-thought.md
# file lands at ${sync.repo_path}/inbox/test.md AND in the DB
# MCP remote (Zapier / Cursor / Claude Desktop)
curl -X POST /mcp ... '{"method":"tools/call","params":{"name":"put_page",...}}'
# server-side write-through fires, agent gets a normal success response
# untrusted_payload tagging applied (no auto-link, slug-allowlist gate)
Provenance frontmatter stamped on every write so future sync round-trips
know where the page came from:
ingested_via: put_page # local CLI
ingested_via: 'mcp:put_page' # MCP remote
ingested_at: 2026-05-21T04:...
WHAT THIS COMMIT BUILDS
1. Migration v80 — `pages_provenance_columns` adds four nullable
columns to `pages`: `ingested_via`, `ingested_at`, `source_uri`,
`source_kind`. ADD COLUMN with no DEFAULT is metadata-only on
Postgres 11+ and PGLite 17.5; instant on tables of any size. The
four columns get NULL on every historical page (pre-v0.38 pages
never had provenance).
2. DRY extract — `serializePageToMarkdown(page, tags, opts)` and
`resolvePageFilePath(brainDir, slug, sourceId)` in `src/core/markdown.ts`.
The dream-cycle's `renderPageToMarkdown` (synthesize.ts) and the new
put_page write-through path were going to have 90% duplicate bodies.
They now share one foundation; the dream version is a 4-line wrapper
that passes `frontmatterOverrides: {dream_generated: true, ...}`.
Future markdown-shape changes happen in one place.
3. put_page write-through (`src/core/operations.ts`) — after
importFromContent succeeds, resolves sync.repo_path, computes the
v0.32.8 source-aware path layout (default: brainDir/<slug>.md;
non-default: brainDir/.sources/<id>/<slug>.md), serializes the
freshly-written Page via `serializePageToMarkdown`, writes the file.
Returns a `write_through: {written, path}` field in the put_page
response so callers can see what happened.
Trust gating:
- subagent sandbox (viaSubagent without allowedSlugPrefixes) → DB-only
- dry-run → DB-only (handler's early-return short-circuits before
write-through; documented via the dry_run response field)
- no sync.repo_path configured → DB-only, skipped reason returned
- sync.repo_path points at a non-existent dir → DB-only, skipped
- all other writes → write-through
Failure isolation: disk-write failures are LOGGED loud but do NOT
roll back the DB write. DB is the durable record; the
phantom-redirect pass exists for drift cleanup if it ever shows up.
TESTS
- test/ingestion/put-page-write-through.test.ts (10 cases against PGLite):
happy path (file land, provenance stamp local + remote), trust gating
(subagent sandbox, dry-run, trusted-workspace), config edges (no
repo_path, missing dir), multi-source filing (.sources/<id>/),
failure isolation (DB write survives a disk failure).
- Migration v80 verified across both engines via the existing
test/migrate.test.ts + test/bootstrap.test.ts coverage (~125 cases).
369 total tests passing in the ingestion + markdown + migrate bundle.
typecheck clean.
NOTES
- Bootstrap probes for the v80 provenance columns are NOT yet added
to applyForwardReferenceBootstrap on either engine. This is safe
for v0.38 because no SCHEMA_SQL CREATE INDEX or FK references the
new columns — migration v80 is the only consumer, and it runs
AFTER SCHEMA_SQL replay. A future commit may add bootstrap probes
+ REQUIRED_BOOTSTRAP_COVERAGE entries as defense-in-depth (eng
review E4).
- The trusted-workspace path (dream cycle's reverseWriteRefs in
synthesize.ts) still runs its own write at synthesize phase time.
Both paths writing the same file is idempotent (byte-identical
serialization), but a future commit may simplify reverseWriteRefs
to skip pages whose file already matches.
NEXT IN WAVE
gbrain capture verb (the single human-facing entrypoint); daemon
rename autopilot -> ingest with forever-alias + plist migration;
doctor inotify probe (Linux); content-type processor router
(PDF + image OCR + audio transcribe stubs); cron-scheduler refactor
+ OpenClaw credential auto-migrate; skillpack contract docs +
reference pack; VERSION bump.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(ingestion): gbrain capture — the single human-facing entrypoint
WHAT YOU CAN NOW DO
One command, local or thin-client, synchronous receipt with the resulting
page slug. The answer to "what is the best way to get data into the brain?"
is now: just type `gbrain capture` and the right thing happens.
# the basic case
gbrain capture "remember to follow up on the X deal"
# from a file
gbrain capture --file ./notes/today.md --slug daily/2026-05-21
# from a pipe (shell pipelines)
echo "from stdin" | gbrain capture --stdin
# script-friendly: print just the slug
SLUG=$(gbrain capture "a thought" --quiet)
# JSON for agents
gbrain capture "..." --json
Default slug is `inbox/YYYY-MM-DD-<hash8>` — deterministic for the same
content so re-running idempotently lands the same page. Receipt block
on stdout shows slug + status + content_hash + on-disk path so you
can confirm where the page went without rerunning `gbrain query`.
The local-install path routes through the put_page operation with the
v0.38 write-through plumbing landed in the prior commit, so the page
hits both the DB AND the file tree in one move. Thin-client installs
route through `callRemoteTool('put_page', ...)` so the server's
write-through handles disk persistence the same way.
WHAT THIS COMMIT BUILDS
- src/commands/capture.ts (new ~290 LOC):
- `defaultSlug(content)` — UTC-stable `inbox/YYYY-MM-DD-<hash8>`
- `parseArgs(args)` — positional + flag parsing with --file / --stdin
/ --slug / --type / --source / --quiet / --json / --help
- `buildContent(rawBody, opts)` — wraps unstructured prose in
frontmatter (type + title + captured_via + captured_at) and a
leading `# Title` heading; passes through if the body already
looks like markdown
- `runCapture(engine, args)` — local install routes through the
in-process put_page operation; thin-client routes through MCP.
`--quiet` prints just the slug; `--json` prints structured output;
default prints a 5-line receipt block.
- src/cli.ts:
- Adds `case 'capture'` dispatch
- Adds `'capture'` to the CLI_ONLY set so cli.ts wires it correctly
TESTS
test/commands/capture.test.ts (21 cases against PGLite):
- defaultSlug helper: shape + determinism + UTC math
- parseArgs: positional + multi-token join + every flag
- buildContent: prose wrapping, --type override, no double-wrap
for pre-frontmattered content, title cap at 80 chars,
--source provenance stamp
- Integration: inline content lands in DB + on disk, default slug
shape, --file reads from disk, --json structured output,
--help returns without engine roundtrip
271 total tests passing in the bundle. typecheck clean.
NOTES
- Thin-client routing relies on `callRemoteTool('put_page', ...)` from
src/core/mcp-client.ts. Identical UX to the local path because the
server's put_page handler runs the same write-through plumbing.
- buildContent's "looks like markdown" heuristic is intentionally
simple — first-line heading or frontmatter delimiter is the trigger.
Users who care about exact formatting pass a pre-formatted --file.
NEXT IN WAVE
Daemon rename autopilot -> ingest with forever-alias + plist migration;
doctor inotify probe (Linux); content-type processor router
(PDF + image OCR + audio transcribe stubs); cron-scheduler refactor
+ OpenClaw credential auto-migrate; skillpack contract docs +
reference pack; VERSION bump.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(ingestion): v0.38.0.0 release hygiene + e2e roundtrip + capture skill
VERSION 0.37.1.0 → 0.38.0.0 (trio: VERSION, package.json, CHANGELOG header).
CHANGELOG entry written in user-facing ELI10-lead voice per CLAUDE.md
release-summary rules. README's pre-loop section gains a new "How to get
data in (v0.38+)" block leading with `gbrain capture`.
skills/capture/SKILL.md (NEW) so agents route "capture this" / "save this
thought" / "remember this" / "drop this in the inbox" / "save to brain" to
the capture verb. RESOLVER.md updated with the new triggers (sits above
idea-ingest/media-ingest/meeting-ingestion in the content-ingestion
section as the "simple thought" path).
E2E roundtrip test (test/e2e/ingestion-roundtrip.test.ts) covers the gap:
inbox-folder source -> daemon -> ingest_capture handler -> DB page,
including:
- Full pipeline: file drop appears as page in DB + file moves to .archived/
- Dedup catches byte-identical content from a different filename
- Multi-source coordination: two distinct inbox dirs, two sources, daemon
ingests both events independently
The test runs against an in-memory PGLite (no DATABASE_URL needed) so it
exercises the substrate-level wiring in the standard test suite. A
follow-up commit can add a full-process e2e (gbrain serve --http + real
OAuth client + POST /ingest) that requires DATABASE_URL.
399/399 v0.38 wave tests passing (910 assertions). typecheck clean.
bun run verify gate green across all 14 shell checks.
DEFERRED TO FOLLOW-UP RELEASES (called out in CHANGELOG)
- Daemon rename autopilot -> ingest + forever-alias + plist migration
- cron-scheduler skill refactor + OpenClaw credential auto-migrate
- Content-type processors (PDF / OCR / audio / video)
- gbrain doctor inotify probe (Linux)
- Publisher DX cathedral: gbrain skillpack init --kind=ingestion-source,
gbrain ingest test --watch, ingest tail, ingest validate
- Reference pack at examples/skillpack-ingestion-reference/ + 3-stage
tutorial in docs/ingestion-source-skillpack.md
These are polish items; the substrate is shipped and queryable, and
skillpack publishers can build sources against the IngestionTestHarness
public export today.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix(ingestion): test-gap fills — bootstrap probes + manifest entry + conformance
The v0.38.0.0 release-hygiene commit landed cleanly against the v0.38 wave
suite but tripped 3 categories of full-suite tests. This commit fixes
each. The remaining failure (doctorReportRemote > "healthy" status) was
verified pre-existing via `git stash + bun test` and is not caused by
v0.38; left alone.
Fix 1 — `schema-bootstrap-coverage.test.ts` (s1)
The test parses MIGRATIONS for ALTER TABLE ADD COLUMN statements and
fails if any column is not covered by `applyForwardReferenceBootstrap`
on both engines. Migration v80's four provenance columns triggered
the failure. Bootstrap probes added to both engines + 4 entries
appended to REQUIRED_BOOTSTRAP_COVERAGE:
- src/core/pglite-engine.ts — 4 EXISTS probes + state field + needs
flag + ALTER TABLE block when bootstrap fires
- src/core/postgres-engine.ts — same pattern
- test/schema-bootstrap-coverage.test.ts — 4 coverage entries
Fix 2 — `check-resolvable.test.ts` (s3 — orphan_trigger)
RESOLVER.md references skills via name; check-resolvable cross-checks
against skills/manifest.json. The new `capture` skill was missing the
manifest entry; added between `brain-ops` and `idea-ingest` so the
manifest order mirrors the resolver order.
Fix 3 — `skills-conformance.test.ts` (s8)
Every SKILL.md must have `## Contract`, `## Output Format`, and
`## Anti-Patterns` sections. skills/capture/SKILL.md was missing all
three (initial draft skipped them); now compliant with concrete
content per the v0.38 contract.
Fix 4 — `build-llms.test.ts` (s6)
README + CHANGELOG edits in the release-hygiene commit caused
llms-full.txt to drift behind. Regenerated via `bun run build:llms`.
Per CLAUDE.md: any user-facing docs edit MUST run build:llms before
push.
The full bun-test parallel runner now passes everywhere except the
pre-existing `doctorReportRemote > healthy status` failure (50/100
score on an empty fresh brain — this is a pre-v0.38 health-score
tuning issue and orthogonal to ingestion work).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore(version): bump 0.38.0.0 → 0.38.1.0
Renumbers the in-flight ingestion-cathedral release to v0.38.1.0.
Trio (VERSION, package.json, CHANGELOG.md) bumped together.
bun run typecheck → clean.
* chore(version): bump 0.38.1.0 → 0.38.0.0
Master sits at 0.37.11.0; 0.38.0.0 is the natural next slot rather than
skipping a release. Trio (VERSION, package.json, CHANGELOG.md) bumped
together. Migration v81 + ingestion substrate stay identical — this is a
header-only renumber.
bun run typecheck → clean.
* test(ingestion): fill v0.38 test gaps — markdown helpers + migration v81 + webhook E2E
Three gaps surfaced from a v0.38 audit against what shipped vs what was
covered. All three filled:
1. **test/markdown-serializer.test.ts** (NEW, 19 cases) — pure-function
coverage of `serializePageToMarkdown` + `resolvePageFilePath`, the
DRY extract that the dream-cycle reverse-render and put_page
write-through both consume. Pre-fix nothing pinned the
frontmatter-override merge precedence, the type/title defaults, or
the source-aware filing layout (default → `<brainDir>/<slug>.md`,
non-default → `<brainDir>/.sources/<source_id>/<slug>.md`). Future
schema-shape changes to either helper now surface immediately.
2. **test/migrate.test.ts — v81 cases** (10 new cases, two describe
blocks) — structural assertions on `pages_provenance_columns`
(four nullable columns, no NOT NULL, no DEFAULT, no index — the
ADD COLUMN stays metadata-only) plus a PGLite round-trip that
asserts the columns appear post-`initSchema`, accept direct UPDATEs,
and survive the historical-page NULL scenario. The
schema-bootstrap-coverage test already pinned the forward-reference
probe contract; this fills the migrate.test.ts contract gap.
3. **test/e2e/serve-http-ingest-webhook.test.ts** (NEW, 16 cases) — HTTP
contract coverage for POST /ingest. The pre-existing
ingestion-roundtrip E2E explicitly notes "e2e (gbrain serve --http +
POST /ingest + real OAuth) is a separate" thing — it covers the
in-process daemon → handler → DB pipeline, NOT the real HTTP route.
This file fills that gap. Spawns real gbrain serve --http against
real Postgres, mints OAuth tokens with various scopes, exercises:
- Auth gate (missing → 401; read-only → 403)
- Body validation (empty → 400 with error: empty_body)
- Content-type allowlist (image/png → 415 with skillpack hint;
application/pdf → 415; text/plain + application/json + text/html
all accepted; unknown text/* falls through to text/plain)
- X-Gbrain-Content-Type / Source-Id / Source-Uri / Slug header
overrides
- Idempotency (same content + same client = identical job_id via
queue dedup on content_hash)
Also wires three new entries into `scripts/e2e-test-map.ts` so changes
to `src/commands/serve-http.ts`, `src/core/ingestion/**`, or the
`ingest-capture` Minion handler auto-trigger the relevant E2Es under
`bun run ci:local:diff`.
Verified locally:
- bun test test/markdown-serializer.test.ts → 19/19 green
- bun test test/migrate.test.ts -t "v81" → 10/10 green
- bun test test/e2e/serve-http-ingest-webhook.test.ts (real Postgres on
ephemeral 5435) → 16/16 green
- bun test test/select-e2e.test.ts → 24/24 green (selector test still
honors the v0.38 entries)
- bun run typecheck → clean
E2E DB lifecycle handled per CLAUDE.md (spin up pgvector:pg16 on a free
port, bootstrap via `gbrain doctor --json`, run, tear down).
---------
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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d0d0e2a64a |
v0.37.11.0: fresh-install PGLite embedding setup fix wave (#1286)
* chore(test): preload gateway to OpenAI/1536 so 1536-dim test fixtures keep working The v0.37 fix wave changes the canonical gateway defaults to zeroentropyai:zembed-1 / 1280 (matching what v0.36 already chose as the system default). 20+ test files have hardcoded new Float32Array(1536) fixtures that match the OLD schema default. Without this preload, those tests fail with a vector-dim-mismatch on insert. The preload is gateway-only — it doesn't change which model gbrain ships to production users. Tests that want the new ZE/1280 defaults call configureGateway() explicitly in their own beforeAll. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(ai): canonical embedding defaults + sweep across schema/engines/registry Closes the v0.36 defaults drift bug class. The gateway shipped zeroentropyai:zembed-1 / 1280 as the system default in v0.36 but eight other places kept hardcoding 1536 / text-embedding-3-large. Fresh gbrain init --pglite sized the column to 1536, the embed pipeline used ZE/1280, and every page failed with dim mismatch. - New src/core/ai/defaults.ts leaf module is the canonical source for DEFAULT_EMBEDDING_MODEL / DEFAULT_EMBEDDING_DIMENSIONS. Schema and registry helpers import from this lean module instead of pulling the full gateway (which loads every provider SDK). - src/core/ai/gateway.ts re-exports the constants for back-compat. - src/core/pglite-schema.ts getPGLiteSchema() defaults track gateway. - src/core/postgres-engine.ts getPostgresSchema() default args track gateway (same drift on the Postgres path — codex round 1 CDX-1). - Both engine.initSchema() fallbacks track gateway constants (no more stale OpenAI/1536 catch-block defaults). - Schema seed stops stripping the provider prefix; full provider:model is stored in the DB config table (codex round 1 CDX-4). - Chunk-row INSERT defaults track gateway (codex round 2 CDX2-4 — pglite-engine:1611 + postgres-engine:1647 were production write sites previously hardcoded to text-embedding-3-large). - src/core/search/embedding-column.ts loadRegistry + isCacheSafe gain the cfg > gateway > DEFAULT resolution chain (codex round 2 CDX2-3). The gateway tier matters because callers that configure the gateway (init paths, tests, programmatic SDK) expect the registry to mirror that state when cfg doesn't have an explicit embedding_model. Tests: - schema-templating: default expectation flips to ZE/1280 (v0.37 truth). - embedding-dim-check: 3 new engine-kind branching cases + updated fresh-brain expectation (under legacy preload). - embedding-column: registry + isCacheSafe expectations match new chain. - v0_28_5-fix-wave E2E: engineKind required arg propagated. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(init+config+cli): always-configure gateway, file-only loader, honest config-set, sync/reinit help Closes the "fresh init doesn't work + config-set silently lies" bug class end-to-end. Six related changes that ship together because the file-plane/DB-plane contract only holds when init paths, config-set, the gateway env mapping, and the recipe text all agree. Lane B (init paths): - initPGLite, initPostgres, initMigrateOnly always configureGateway() before engine.initSchema(). Pre-fix the call was gated on flags, so bare `gbrain init --pglite` left the gateway unconfigured and the engine fell through to stale OpenAI/1536 defaults instead of the ZE/1280 the gateway would have resolved. - New configureGatewayWithMergedPrecedence() helper applies the locked precedence chain `CLI > env > existing file > gateway internal`. - printResolvedAIChoice() shows the resolved model/dim at init time + surfaces a ZE setup hint inline when the API key is missing. - B.4: saveConfig merge uses loadConfigFileOnly() so transient env state (DATABASE_URL, etc.) never poisons ~/.gbrain/config.json (codex round 2 CDX-5). - B.5: extend the v0.28.5 dim-mismatch detector so it fires when the gateway-resolved dim differs from the existing column, not only when --embedding-dimensions is explicit (codex round 2 CDX-6). Lane C (config plane): - New `loadConfigFileOnly()` reads ~/.gbrain/config.json only — no env merge, no DATABASE_URL inference. Safe write-back source for init. - GBrainConfig gains `zeroentropy_api_key?: string`. loadConfig merges process.env.ZEROENTROPY_API_KEY. buildGatewayConfig at cli.ts:1401 maps it into env.ZEROENTROPY_API_KEY so ZE recipes finally see it (codex round 2 CDX2-5+6 — the v1 fix landed in the wrong file). - `gbrain config set embedding_model` and `... embedding_dimensions` refuse unconditionally and print a paste-ready wipe-and-reinit recipe. No --force escape (codex round 2 CDX2-13). - migrate-engine.ts adds a contract comment at the DB-plane write site documenting "DB stores schema-applied metadata; file plane is canonical for runtime gateway config" + preserves the existing file-plane config across engine migration. Lane D.1 (recipe text): - embeddingMismatchMessage() takes an `engineKind` arg. PGLite branch emits a wipe-and-reinit recipe using gbrainPath('brain.pglite') or the caller's databasePath override. Postgres branch keeps the SQL ALTER recipe. - The PGLite recipe recommends `gbrain reinit-pglite` (new sugar command below) as the one-line path before falling back to the by-hand mv + init + sync sequence. Lane D.4 (sync help dispatch): - `sync` and `reinit-pglite` added to CLI_ONLY_SELF_HELP so their own --help branches reach the user (pre-fix the generic short-circuit fired first and the dedicated usage was unreachable; codex round 2 CDX2-12). - `gbrain sync --help` short-circuits BEFORE engine bind so users on a fresh tmpdir (no config) can read the help without hitting no-such-config errors. Sugar: - New `gbrain reinit-pglite --embedding-model X --embedding-dimensions N` wraps the wipe + init + sync dance into one command. Backs up the brain to <path>.bak. TTY confirmation unless --yes. --no-sync to defer the resync. --json for scripts. Tests: - test/cli.test.ts sync-help test rewritten for the new per-command-usage output (lists --no-embed which is the v0.37 user-visible flag the wave wanted to surface). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(embed+sync): pre-flight dim-mismatch guard + sync hint at both catch sites embedding-pipeline error UX. Pre-fix, a fresh-install dim mismatch produced raw Postgres "expected N dimensions, not M" errors page after page, surfacing only after the worker pool drained the entire corpus. Sync swallowed embed errors at TWO catch sites and never surfaced the recovery recipe. embed.ts: - New `EmbeddingDimMismatchError` tagged class with the paste-ready recipe baked in. - `runEmbedCore` pre-flights via `readContentChunksEmbeddingDim` + gateway.getEmbeddingDimensions() before the worker pool spins up. On mismatch, throws the typed error which the CLI wrapper catches and prints. Dry-run skips the check (no embed risk). - Catches the headline fresh-install bug class at first call instead of letting it hammer N parallel API calls into dim-rejected inserts. sync.ts: - Both embed catches at sync.ts:990 (incremental) and sync.ts:1129 (first-sync) detect EmbeddingDimMismatchError and surface the recipe + a `--no-embed` tip on stderr (codex round 2 CDX2-8: incremental path was previously silent; only the first-sync path was flagged). - Non-mismatch embed failures still stay best-effort (rate limits, transient network) — those shouldn't break sync. - Sync calls runEmbedCore directly instead of runEmbed (which calls process.exit on error and bypasses sync's catch). - Sync gets a proper --help block listing every meaningful flag: --no-embed, --workers, --source, --skip-failed, --retry-failed, --watch, --interval, --no-pull, --all, --json, --yes, --dry-run. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(doctor): read gateway for schema-sizing checks + provider-aware key lookup Doctor's embedding checks were reading the DB config table for embedding_model / embedding_dimensions / zeroentropy_api_key. Post v0.37 the file plane is canonical (the DB plane is schema-applied metadata, not runtime gateway config) so those reads produced stale verdicts on fresh installs whose DB row hadn't been written. - checkEmbeddingWidthConsistency reads gateway.getEmbeddingDimensions() and gateway.getEmbeddingModel() instead of engine.getConfig(...). Reuses readContentChunksEmbeddingDim from the same shared helper init + embed use. On mismatch, the fix hint threads engineKind + databasePath into the new branched recipe (codex round 1 CDX-8 + Lane E.1/E.2). - checkZeEmbeddingHealth reads gateway for the model + loadConfigFileOnly for the key. Fires when (a) resolved model starts with zeroentropyai: AND (b) ZEROENTROPY_API_KEY is unset in env AND (c) file plane has no zeroentropy_api_key (codex round 2 CDX2-10). - loadRecommendationContext reads gateway for both fields and recognizes the ZE key alongside OpenAI/Anthropic in the hasEmbeddingApiKey check, so brains on ZE no longer look "healthy" just because OPENAI_API_KEY happens to be set (codex round 2 CDX2-11). Tests rewritten for the gateway-source-of-truth contract via configureGateway() in beforeAll. Added a "gateway unconfigured: skips with ok" case so doctor doesn't false-warn on cold-boot brains. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test+docs(v0.37): fix-wave unit coverage + PGLite-first migration recipe + TODOS Lands the v0.37 PGLite fresh-install fix wave's structural tests and the user-facing migration recipe overhaul. test/v0_37_fix_wave.test.ts (new): 22 unit cases pinning the lanes: - Lane A: defaults module exports, getPGLiteSchema/getPostgresSchema default-args, registry + isCacheSafe under the `cfg > gateway > DEFAULT` chain (both gateway-set and gateway-reset branches). - Lane B: loadConfigFileOnly env isolation + DATABASE_URL inference refusal + null-on-missing. - Lane C.3: buildGatewayConfig maps zeroentropy_api_key + process.env wins over config (operator escape hatch contract). - Lane D.2: EmbeddingDimMismatchError shape + tag. - Lane D.4: structural assertion that `sync` is in CLI_ONLY_SELF_HELP. - Deferred-TODO ship: reinit-pglite is registered correctly + embeddingMismatchMessage PGLite branch recommends it. docs/embedding-migrations.md: PGLite section moved to top (the default install). The recommended path is `gbrain reinit-pglite` one-liner; the by-hand mv + init + sync sequence stays as the fallback recipe. Postgres SQL ALTER recipe preserved. New section on `gbrain config set` refusal explains the file-plane vs DB-plane contract so users don't follow stale documentation. TODOS.md: 4 deferred follow-ups filed with concrete file pointers: - gbrain embed --try-fallback (provider auto-switch with consent gate) - Full plane unification for non-schema-sizing fields - Worker-pool shared AbortController for mid-run dim drift - Cleanup of back-compat constants in src/core/embedding.ts Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test(v0.37): fill behavior gaps + headline fresh-install E2E The structural fix-wave tests in test/v0_37_fix_wave.test.ts pin lane-level invariants (exports, registry chain, signature shapes). The audit found 10+ END-TO-END behaviors that the structural tests didn't actually reach. This file fills the highest-leverage gaps. Unit coverage (test/v0_37_gap_fill.test.ts, 12 cases): - Lane A.7: chunk-row INSERT default tracks DEFAULT_EMBEDDING_MODEL constant (pre-fix this was the literal 'text-embedding-3-large' at pglite-engine.ts:1611 + postgres-engine.ts:1647 — production write sites that were never directly tested; codex round 2 CDX2-4). - Lane A.8: schema seed stores full provider:model in DB config (pre-fix the .split(':') strip dropped the prefix; codex round 1 CDX-4). Asserts a fresh ZE init stores `zeroentropyai:zembed-1` in the config table, not bare `zembed-1`. - Lane B precedence: explicit CLI > env > existing file > default test (codex round 2 CDX2-7 contradiction guard). - Lane C.3 env merge: process.env.ZEROENTROPY_API_KEY threads through loadConfig → cfg.zeroentropy_api_key; loadConfigFileOnly does NOT. - Lane D.2 end-to-end: schema=1536 + gateway=1280 → EmbeddingDimMismatchError fires AND the embed transport is never called (the whole point of pre-flight). Plus dry-run skips the check. - Lane D.3 source-text grep: both sync.ts catch sites detect the typed error + the `--no-embed` tip is present (CDX2-8). - Lane E.4 source-text grep: loadRecommendationContext is provider-aware (reads gateway + branches on ZE/OpenAI key). - reinit-pglite contract: refuses on non-PGLite engines + refuses when required flags are missing. E2E (test/e2e/fresh-install-pglite.test.ts, 2 cases): - Bare `gbrain init --pglite` produces a `vector(1280)` schema, prints the resolved choice, persists defaults to config.json — the headline scenario that v0.37 ships to fix. - init → seed page → embed end-to-end: chunks have non-null embeddings; no dim mismatch despite the wave's defaults change. Both E2E cases are IN-PROCESS (per CDX2-12: CLI-subprocess E2E can't inherit `__setEmbedTransportForTests`). They run with stubbed transport returning synthetic 1280-dim vectors so we never hit real provider APIs. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test(v0.37): defensive gateway restore in reinit-pglite describe block Adds an afterAll that restores the gateway to OpenAI/1536 (matching the bunfig preload) at the end of the reinit-pglite describe. Belt-and- suspenders: earlier describe blocks in this file already restore, but if the reinit-pglite tests ever start mutating the gateway in the future, this protects downstream test files in the same bun-test shard from inheriting a non-default state. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: bump version and changelog (v0.37.10.0) Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> * docs: scrub stale config-set recipes for embedding model (v0.37.10.0) README + topologies + embedding-providers were still pointing users at `gbrain config set embedding_model X` / `embedding_dimensions N`. As of v0.37.10.0 those writes are refused — the schema column has to resize alongside the config. Point at `gbrain reinit-pglite` (PGLite) and the SQL recipe in `docs/embedding-migrations.md` (Postgres) instead. Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> * chore: bump version to v0.37.11.0 Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> * test: quarantine v0.37 fix-wave tests to .serial.test.ts CI's `check:test-isolation` lint flagged R1 violations (direct `process.env.GBRAIN_HOME` mutation) in both new fix-wave test files. Per the documented quarantine pattern in CLAUDE.md, rename to `*.serial.test.ts` instead of refactoring through `withEnv()` — both files use beforeEach/afterEach env wiring that's already serial-safe. Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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a55de71221 |
v0.37.10.0 feat(init): env-detection + interactive picker + preflight invariants (#1278)
* feat(core): Levenshtein helper + preflight schema-dim resolvers Foundation for v0.37.10.0 env-detection wave. Two pure modules: - src/core/levenshtein.ts: editDistance(a,b) + suggestNearest(input, candidates, maxDistance). Used by config-set "did you mean" suggestions and env-var typo detection at init. - src/core/embedding-dim-check.ts: resolveSchemaEmbeddingDim() + resolveSchemaMultimodalDim() pure functions. Validate resolved dim against recipe default_dims + per-provider Matryoshka allow-lists (OpenAI text-3, Voyage flexible-dim, ZeroEntropy zembed-1) BEFORE any DB write. Plus EmbeddingDisabledError + assertEmbeddingEnabled() runtime guard for the deferred-setup path (D9). New PGVECTOR_COLUMN_MAX_DIMS=16000 exported. Tests: 41 unit cases across both modules. * feat(providers): extract formatRecipeTable + add init provider picker Two changes prepping the env-detection wave: - providers.ts: extract formatRecipeTable() helper from runList(). Picker reuses it so UI can't drift from \`gbrain providers list\`. Also adds the codex finding #10 warn-line to \`providers test\` when the tested model differs from the configured default ("Note: tested X in isolation; gbrain's configured embedding is Y — this test does NOT verify your brain's active path."). envReady() takes an explicit env arg for testing. - init-provider-picker.ts (NEW): interactive picker mirroring init-mode-picker.ts. Filters candidate recipes to env-ready ones (codex finding #3), prompts via readLineSafe, exports printSubagentAnthropicCaveat() for shared use from initPGLite/initPostgres. Tests: 17 unit cases (10 providers + 7 picker). * feat(config): embedding_disabled sentinel + strict unknown-key rejection Two changes for the v0.37.10.0 wave: - src/core/config.ts: add embedding_disabled?:boolean to GBrainConfig (D9 deferred-setup sentinel, mutually exclusive with embedding_model). Export KNOWN_CONFIG_KEYS (60+ canonical keys, file-plane + DB-plane) and KNOWN_CONFIG_KEY_PREFIXES (search., models., dream., cycle., etc.) for validation use. - src/commands/config.ts: D6 strict-default unknown-key rejection. Unknown key + no --force → exit 1 with Levenshtein suggestion against KNOWN_CONFIG_KEYS. Prefix matches accepted without --force. --force escape hatch accepts arbitrary keys with stderr WARN. Closes the silent-no-op class the bug reporter hit (embedding.provider, embedding.model, embedding.dimensions all exit 1 with right suggestion). Tests: 19 unit cases pinning the bug-reporter regression + gate logic. * feat(init): env-detection auto-pick + preflight + atomic persist + --no-embedding Core of the v0.37.10.0 wave (D1-D7, D9-D11). Closes the bug where a fresh \`gbrain init --pglite\` silently produced a broken brain when no provider key matched the v0.36 default. resolveAIOptions rewritten with per-touchpoint env detection: - Explicit flag → shorthand → env auto-pick (group by provider id, codex #2) - Picker fires when multiple providers env-ready (D1+D2 hybrid) - Non-TTY zero-key exits 1 with paste-ready setup hint (D3) + Levenshtein typo detection for OPENAPI_API_KEY → OPENAI_API_KEY (D13) - All three touchpoints covered (embedding + expansion + chat, D4) - Local-only providers (Ollama/llama-server) excluded from auto-pick; picking Ollama silently when user has OPENAI_API_KEY set was wrong UX initPGLite + initPostgres: - Drop conditional configureGateway gate → always call before initSchema - Preflight resolveSchemaEmbeddingDim() BEFORE engine.initSchema() (D11) — invalid dim refuses with paste-ready hint, no disk write - Atomic embedding-config persistence (codex #13): either resolved tuple or embedding_disabled:true sentinel, never partial state - Post-initSchema invariant assertion stays as regression guardrail - --no-embedding opt-in flag (D9) for deferred-setup mode - Subagent-Anthropic caveat (D7) fires post-init when chat_model is non-Anthropic AND ANTHROPIC_API_KEY missing Exported groupReadyByProvider() + findEnvKeyTypos() for unit testing. Tests: 21 unit cases covering provider grouping + typo detection edge cases. * feat(embed,import): refuse cleanly when --no-embedding deferred-setup is active T7 of the v0.37.10.0 wave. Both runEmbedCore and runImport now call assertEmbeddingEnabled(loadConfig()) at entry. When the brain was init'd with --no-embedding (config has embedding_disabled:true), they exit 1 with a paste-ready hint: gbrain config set embedding_model <provider>:<model> gbrain config set embedding_dimensions <N> gbrain init --force --embedding-model <provider>:<model> \`gbrain import --no-embed\` flag still works (chunks land without vectors), so users can still ingest in deferred-setup mode and backfill embeddings later with \`gbrain embed --stale\`. * feat(doctor): empty-config drift detection + subagent-Anthropic caveat extension Two doctor check extensions for v0.37.10.0: T9 — embedding_provider check extended for the v0.36 silent-default repair case. When config is empty AND schema column dim differs from the gateway-resolved default, surface the mismatch with empty-brain vs non-empty-brain repair branching (codex finding #7 nuance): - Empty brain (0 embedded chunks) → \`gbrain init --force --pglite --embedding-model <id> --embedding-dimensions <N>\` (drop and re-init) - Non-empty brain → \`gbrain retrieval-upgrade --to <id> --reindex\` Gated on totalChunks > 0 so pristine empty brains aren't pre-warned. Never recommend rm -rf ~/.gbrain. T10 — subagent_provider check (v0.31.12) extended per D7. When chat_model is non-Anthropic AND ANTHROPIC_API_KEY is missing, warn that subagent features (gbrain dream, gbrain agent run, gbrain autopilot) will fail at job submission. Chat alone (gbrain think) still works. * feat(reindex,test): multimodal preflight + E2E suite for fresh PGLite init T11 — reindex-multimodal.ts: hook resolveSchemaMultimodalDim() preflight BEFORE the reindex sweep. Mirrors the text-side contract from initPGLite — if the configured multimodal model can't produce a dim matching the schema column, fail loud here with a \`gbrain config set\` hint rather than mid-reindex with a vector(N) INSERT error. T12 — test/e2e/init-fresh-pglite.test.ts (NEW, 14 cases): subprocess-driven E2E verification of the bug-reporter's repro scenarios: - Happy path: OPENAI_API_KEY set → auto-pick OpenAI, persists config - D3 non-TTY fail-loud (with and without env-key typos) - D6 regression: bug-reporter's three no-op config keys all exit 1 with Levenshtein suggestions - D9 deferred-setup mode + gbrain import refusal (and --no-embed bypass) - D11 preflight refuses BEFORE any disk write - Explicit --embedding-model wins over env detection Each test uses its own throw-away GBRAIN_HOME for hermetic runs. * docs: env-detection + headless-install + close v0.32 picker TODO T13/T14 docs sync for v0.37.10.0: - docs/integrations/embedding-providers.md: TL;DR table refreshed to reflect ZE as v0.36 default; added "Init resolves your provider from env keys" section explaining the auto-pick → picker → fail-loud chain; added "If first import fails" troubleshooting block pointing at gbrain doctor instead of \`rm -rf ~/.gbrain\`. - docs/operations/headless-install.md (NEW): Docker/CI sequencing guide. Two acceptable patterns — provider key at build time (Pattern 1) or --no-embedding opt-in + runtime config (Pattern 2). Codex finding #11. - README.md: Troubleshooting section with one-paragraph repair hint and links to embedding-providers.md + headless-install.md. - TODOS.md: closed v0.32.x "interactive provider chooser" entry as SUPERSEDED by this wave. Added four follow-up entries (dedicated v0.36 broken-install migration, namespaced ext fields, runtime config-key audit, value-level Levenshtein on config set). * chore: bump version and changelog (v0.37.10.0) Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> * fix(doctor): empty brain scores 100/100 + hermetic doctor-report-remote test Two fixes coupled because the test couldn't pass without the formula fix: src/core/pglite-engine.ts + src/core/postgres-engine.ts — empty brain (pageCount === 0) now gets FULL marks (100/100), not 0/100. Semantically an empty brain has no coverage problem to penalize — there's nothing to embed, nothing to link, nothing to orphan. Vacuous truth applies. The pre-fix "empty = 0" caused fresh-init brains to score as critically unhealthy on \`gbrain doctor\`, which was a structural surprise to users who'd just run init successfully. Same fix on both engines. test/brain-score-breakdown.test.ts — updated the "empty brain" assertion to match the new contract (was: 0/0/0/0/0/0; is: 100/35/25/15/15/10). test/doctor-report-remote.test.ts → renamed to .serial.test.ts and made hermetic. The pre-fix test pulled audit data from the host ~/.gbrain (reranker_health, sync_failures, etc.), which made the assertion non-deterministic depending on whoever ran the suite. Now isolates GBRAIN_HOME to a tempdir via beforeAll/afterAll; env mutation requires serial-quarantine per scripts/check-test-isolation.sh R1. Closes the master-state flake that was failing on every \`bun run test\` run regardless of my branch contents. * docs: update CLAUDE.md and TODOS.md for v0.37.10.0 empty-brain fix - CLAUDE.md: annotate src/core/pglite-engine.ts + src/core/postgres-engine.ts entries with v0.37.10.0 empty-brain 100/100 contract. Vacuous truth: an empty brain has no coverage to penalize, so getBrainScore returns full marks (35/25/15/15/10 breakdown) when pageCount === 0. Pre-fix 0/100 was structurally surprising on fresh init and caused the v0.37.8.0 doctor-report-remote.test.ts flake. - TODOS.md: mark P0 doctor-report-remote.test.ts:65 TODO completed (resolved by commit 9aa571f3's empty-brain-100/100 fix; test renamed to .serial.test.ts and made hermetic per scripts/check-test-isolation.sh R1). - llms-full.txt: regenerated from updated CLAUDE.md per CLAUDE.md "Auto-derived files" rule. Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> * fix(init): D5 persisted-config-wins on re-init + CI mechanical E2E Two coupled fixes for the v0.37.10.0 wave's interaction with CI's Tier-1 mechanical E2E suite (which runs without any embedding-provider env var). src/commands/init.ts — Honor D5 properly at resolveAIOptions entry. Pre-fix the env-detection branch fired on EVERY init regardless of persisted config. A non-TTY re-init with no env keys exited 1 (D3 fail-loud) even when ~/.gbrain/config.json already had embedding_model set from a prior successful init. Now resolveAIOptions reads loadConfig() first and seeds out.embedding_model / embedding_dimensions / expansion_model / chat_model from the file plane BEFORE running env detection. Also honors embedding_disabled (D9 sentinel) on re-init so deferred-setup brains don't re-trigger fail-loud. test/e2e/mechanical.test.ts:722 — Setup Journey's first init runs against a fresh DB with no persisted config. Pass --embedding-model explicitly (openai:text-embedding-3-large) so the preflight resolves offline. After this init writes config, subsequent inits in the file (RLS self-heal v24, RLS event-trigger probes, etc.) honor the persisted config via the D5 fix above. Verified locally: full test/e2e/mechanical.test.ts → 78 pass / 0 fail. --------- Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com> |
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430d784a76 |
v0.37.6.0 feat(ai): OpenRouter recipe + generic default_headers seam (cherry-pick #1210) (#1246)
* feat(ai): add default_headers / resolveDefaultHeaders seam to Recipe Generalizes per-recipe header attachment so attribution headers (OpenRouter's HTTP-Referer + X-OpenRouter-Title) ride alongside Bearer auth on every openai-compatible touchpoint. Two safety guards fire at applyResolveAuth time: declaring both default_headers AND resolveDefaultHeaders throws AIConfigError (mutual exclusion); a default header whose key shadows the resolved auth header (Authorization, the resolver's custom header) also throws. Reranker HTTP path at gateway.ts:2281 now merges both Authorization Bearer AND auth.headers (where default_headers flow) into the request Headers map. Pre-fix the ternary picked one or the other; default_headers would have been silently dropped on the manual rerank path. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(ai): add OpenRouter provider recipe One key, many hosted models. Configures openrouter:<provider>/<model> for chat (GPT-5.2 family, Claude 4.5/4.6/4.7, Gemini 3 Flash Preview, DeepSeek) and embedding (OpenAI text-embedding-3-small with Matryoshka dims_options). max_batch_tokens=300_000 (OpenAI's aggregate per-request token cap, not the per-input 8192 the original PR conflated). resolveDefaultHeaders returns HTTP-Referer + X-OpenRouter-Title + X-Title (back-compat alias) so traffic is attributed to gbrain on OR's leaderboard. Forks override via OPENROUTER_REFERER / OPENROUTER_TITLE env vars. supports_subagent_loop: false is informational — gbrain's subagent infra is hard-pinned to Anthropic-direct via isAnthropicProvider() upstream regardless of this flag. Filed as TODO to verify tool_use_id stability through OR. Cherry-picked from PR #1210. Contributed by @davemorin. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(cli): export buildGatewayConfig + thread OPENROUTER_BASE_URL Exports buildGatewayConfig for unit-test access. Adds one-line passthrough for OPENROUTER_BASE_URL matching the existing LITELLM/OLLAMA/LMSTUDIO/ LLAMA_SERVER pattern so users can point at a self-hosted OR-compatible proxy. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test(ai): cover OpenRouter recipe + default_headers seam + wire-level headers Four test additions: - test/ai/recipe-openrouter.test.ts (11 cases) — recipe shape, Matryoshka dims_options, max_batch_tokens=300K, arbitrary-ID acceptance via assertTouchpoint, defaultResolveAuth happy/error, resolveDefaultHeaders defaults + fork-override path, setup_hint coverage. Shape regression on every chat/embedding model ID (catches typos without pinning the dynamic catalog). - test/ai/recipes-existing-regression.test.ts (+6 cases) — IRON RULE preserved; adds default_headers contract: Bearer+defaults returns both apiKey AND headers, custom-header+defaults merges with resolver winning, mutual-exclusion guard, Authorization-shadow guard, custom-auth-shadow guard, cross-touchpoint parity for all four (embedding/expansion/chat/ reranker). - test/ai/header-transport.test.ts (3 cases) — proves headers actually reach the wire. Synthetic recipes with resolveOpenAICompatConfig fetch wrappers capture outgoing Headers on embed/chat/rerank. Asserts Authorization + HTTP-Referer + X-OpenRouter-Title + X-Title all present. Codex flagged the return-shape-only coverage gap during plan review. - test/ai/build-gateway-config.test.ts (7 cases) — 5-way env-baseURL passthrough sweep through the now-exported buildGatewayConfig. Uses withEnv() from test/helpers/with-env.ts for isolation compliance. Mops up pre-existing untested drift on LLAMA_SERVER/OLLAMA/LMSTUDIO/LITELLM in the same pass. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: add OpenRouter to embedding-providers + bump recipe count 15 -> 16 recipes. Adds OpenRouter row to the TL;DR table, a setup section covering the value-prop (one key, many hosted models), env-var overrides (OPENROUTER_BASE_URL, OPENROUTER_REFERER, OPENROUTER_TITLE), the subagent- loop limitation (isAnthropicProvider() gate), and a "One key for many hosted models" bullet under the decision tree. README updated to match. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: bump v0.37.2.0 version refs to v0.37.4.0 across in-tree comments v0.37.2.0 was claimed by master's takes_resolution_consistency hotfix (#1211) before this branch could land. This commit re-stamps the source comments that reference the OpenRouter recipe / default_headers seam to v0.37.4.0 so the in-tree version markers match the actual landing version. No behavior change — comments only. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: bump version and changelog (v0.37.4.0) One key, many hosted models — OpenRouter recipe lands. Cherry-picked from #1210 (@davemorin), with codex review corrections folded in: - recipe count math (16 not 17) - current OR attribution header name (X-OpenRouter-Title, X-Title back-compat) - max_batch_tokens semantic (300K aggregate per-request, not 8192 per-input) - Matryoshka dims_options for text-embedding-3-small - auth-shadow guard at applyResolveAuth Adds the generic Recipe.default_headers / resolveDefaultHeaders seam so attribution headers ride alongside Bearer auth. Future Together/Groq adoption tracked in TODOS.md. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: rebump to v0.37.6.0 (queue moved past v0.37.4/v0.37.5) VERSION + package.json + CHANGELOG header + CLAUDE.md + TODOS.md + in-tree source comments + llms regen. No code-behavior change. --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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65ff663f7d |
v0.36.4.0 feat: brain-health-100 — autonomous remediation via doctor --remediate + Minions (#1193)
* feat(schema): op_checkpoints table + doctor_run_id partial GIN (v67+v68) T1 of brain-health-100 wave. Two new migrations underpin autonomous remediation via Minions: - v67 op_checkpoints — shared checkpoint table for long-running ops (embed, extract, lint, backlinks, reindex, integrity). Pre-fix each op had its own file-backed checkpoint or none. PRIMARY KEY (op, fingerprint) lets `extract links` and `extract timeline` (or `reindex --markdown` vs `--code`) coexist without colliding on shared keys. - v68 minion_jobs_doctor_run_id_idx — partial GIN on `minion_jobs.data WHERE data ? 'doctor_run_id'`. Indexes only doctor-submitted jobs so audit-trail queries don't sequential-scan months of unrelated cron history. PGLite skips via empty sqlFor. Applied to src/schema.sql + src/core/pglite-schema.ts so both engines get the table on fresh-install. Bootstrap coverage test + 122-case migrate test both pass. Plan: ~/.claude/plans/system-instruction-you-are-working-fluttering-ocean.md (D12 + folded scope B from outside-voice review). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(core): op-checkpoint module — DB-backed checkpoint primitive T2 of brain-health-100 wave. Six exports plus per-op fingerprint helpers: loadOpCheckpoint(engine, key) → string[] (completed keys; [] if none) recordCompleted(engine, key, ks) → void (UPSERT atomic) clearOpCheckpoint(engine, key) → void (clean-exit drop) resumeFilter(all, completed) → string[] (pure; drives batched walks) purgeStaleCheckpoints(engine, ttl)→ number (cycle purge phase consumer) Fingerprint helpers: fingerprint(params) — sha8 of canonical-JSON embedFingerprint(p) — model+dim+slug+source variation extractFingerprint(p) — mode (links vs timeline) reindexFingerprint(p) — markdown vs code vs slug + chunker_version lintFingerprint, backlinksFingerprint, integrityFingerprint, importFingerprint Canonical-JSON over keys-sorted ensures the same params produce the same fingerprint across runs and hosts. sha8 (8 hex chars from sha256) is short enough for filenames + UI but collision-resistant for the expected per-op invocation diversity. DB-backed for both engines (PGLite has the table too via v67). Lost- write on partial DB failure is non-fatal — caller continues, next run re-walks (cheap for hash-short-circuited ops like embed/import). Plan: ~/.claude/plans/system-instruction-you-are-working-fluttering-ocean.md (D12 + codex #10–16 from outside-voice review). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(core): brain-score-recommendations — shared data layer T4 of brain-health-100 wave. Pure module — no engine I/O. Takes a BrainHealth snapshot + RecommendationContext, returns ordered Remediation[] ready to feed the doctor remediation plan OR features --auto-fix. Three public exports: computeRecommendations(health, ctx) → Remediation[] classifyChecks(checks, ctx) → CheckClassification[] maxReachableScore(health, classes) → number (0-100 ceiling) D13 — three-state classification per check: remediable / human_only / blocked. The plan ONLY emits remediable items; blocked surfaces alongside as informational with the missing prereq (no API key, etc.). Closes the spin-loop bug on empty / API-key-missing brains (codex #20). D14 — every Remediation has a stable string id (sync.repo, embed.stale, backlinks.fix, extract.all). depends_on references ids, not check names. D9 — idempotency_key is content-hash from canonical-JSON of params. Same intent across runs = same key; failed-row replay via :r<N> suffix is the --remediate loop's job, not this module's. Scope item +A (cost-budget gate) — Remediation.est_usd_cost populated for embed (chars × pricePerMTok from embedding-pricing.ts) and Anthropic jobs (estimateAnthropicCost helper). doctor --remediate --max-usd N gates submission against est_total_usd_cost. Both consumers (doctor + features per D15) import from here. Features executes inline (D15 contract preserved), doctor submits via queue. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(handlers): 11 new Minion handlers + 3 added to PROTECTED + sync noExtract fix T5 of brain-health-100 wave. PROTECTED_JOB_NAMES extension (D11): synthesize, patterns, consolidate. These cycle phases internally submit `subagent` jobs with allowProtectedSubmit=true, so they CAN spend Anthropic credits. Treating them as "data-quality maintenance" was a misread surfaced by the codex outside-voice review (#6). Protected gate ensures only trusted local callers (CLI, autopilot, doctor --remediate) can submit; an OAuth-scoped MCP client can't burn the user's API budget by submitting a synthesize job over HTTP. 11 new handlers registered in jobs.ts registerBuiltinHandlers: PROTECTED (3) — phase-wrappers that spawn subagent children: synthesize, patterns, consolidate Open (8) — DB/fs writes only, no LLM spend: reindex, repair-jsonb, orphans, integrity, purge, extract_facts, resolve_symbol_edges, recompute_emotional_weight Phase-wrappers all delegate to `runCycle({ phases: [name] })` rather than extracting standalone phase functions. Cycle.ts already owns the lock + abort signal + progress reporter per D10, so the wrapper is a one-liner and cycle.ts remains the single source of truth for phase semantics. Pragmatic deviation from the plan's "extract 6 standalone runXxxPhase functions" — smaller diff, equivalent correctness. Standalone `sync` handler now passes `noExtract: true` (codex #5 fix). Pre-fix, doctor's remediation plan emitting [sync, extract] caused double-extraction (performSync inline-extract + standalone extract job). Now sync defers extract to the dedicated handler. Callers that want inline extract pass { noExtract: false } in job params. Plan: ~/.claude/plans/system-instruction-you-are-working-fluttering-ocean.md (T5 + D10 + D11 + codex #5/#6 from outside-voice review). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(doctor): --remediation-plan + --remediate CLI surfaces T6 of brain-health-100 wave. The headline user-facing capability: agents drive brain health to target score via autonomous Minions remediation. Two new flags on `gbrain doctor`: --remediation-plan [--json] [--target-score N] Read-only. Emits ordered Remediation[] from BrainHealth + context. Uses cheap path (D7) — engine.getHealth() + computeRecommendations, NOT a full doctor walk. JSON shape is stable agent contract. --remediate [--yes] [--target-score N] [--max-jobs N] [--max-usd N] [--dry-run] [--json] Sequential submit (D3) with D5 cascade on failure, D7 scoped recheck between steps, D9 content-hash idempotency keys, D13 three-state remediation filtering (only remediable jobs enter the loop), +A cost-budget gate via --max-usd. Check.remediation field added as additive optional (DoctorReport schema_version stays at 2 per D4). PGLite path: synchronous in-process execution with short polling. Postgres path: durable queue submission with waitForCompletion. The --remediate loop: 1. Compute initial plan from BrainHealth 2. Refuse if --target-score > maxReachableScore(health, classes) 3. Refuse if est_total_usd_cost > --max-usd 4. For each step in order: - Skip if depends_on intersects aborted set (D5) - queue.add with content-hash idempotency_key (D9) - waitForCompletion with timeout - Recompute plan from fresh health (D7 scoped recheck) 5. Exit 0 if all completed; 1 if any failed/aborted doctor_run_id UUID stamps every submitted job's data field so operators can later query `SELECT * FROM minion_jobs WHERE data->>'doctor_run_id' = '<uuid>'` (indexed via v68 partial GIN). Plan: ~/.claude/plans/system-instruction-you-are-working-fluttering-ocean.md (T6 + D1/D3/D5/D7/D9/D13 + folded scope A). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(cli): maybeBackground helper + apply --background to embed T7 of brain-health-100 wave. New helper in src/core/cli-options.ts formalizes the --background flag pattern. Same semantics in TTY and cron per D9 (submit-and-exit always; --background --follow execs `gbrain jobs follow <id>` after submission). await maybeBackground({ engine, args, jobName: 'embed', paramBuilder: (cleanArgs) => ({ stale, all, ... }), }) // returns true if backgrounded → caller exits Content-hash idempotency key (D9): `cli:embed:sha8(canonical-JSON(params))`. No time-slot. Same intent across runs = same key. Failed-row replay is the doctor --remediate loop's job, not this path's. PGLite degrades to inline execution with a clear stderr note ("PGLite has no worker daemon; running inline"). NOT a no-op, NOT silent — doc-stated semantic difference because PGLite has no worker daemon. Applied to `gbrain embed` as the reference integration. The other 6 commands (extract, lint, backlinks, reindex, integrity, pages) adopt the same 4-line pattern at the top of their entry function — follow-up in a smaller diff once the helper proves out in production. Plan: ~/.claude/plans/system-instruction-you-are-working-fluttering-ocean.md (T7 + D9 + Gap 6). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(autopilot): targeted-submit loop + op_checkpoints GC in purge phase T8 of brain-health-100 wave. Autopilot dispatch changes (src/commands/autopilot.ts): Pre-fix: every tick submitted ONE autopilot-cycle job, full phase set, regardless of brain state. On a healthy brain pure overhead; on a degraded brain bundled fast wins with slow phases so user waited for the slowest. New decision logic (T8 from plan): - score >= 95 AND empty plan AND <60min since last full → SLEEP - score >= 95 AND empty plan AND >=60min → submit autopilot-cycle (phase-coupling exercise) - plan <= 3 steps AND est_total < 5min → submit individual handlers (targeted; uses D9 content-hash idempotency keys per step; maxWaiting:1 per submit per codex #17) - else → submit autopilot-cycle (the hammer) D10 cycle-lock invariant guarantees targeted-submit and autopilot-cycle can never run concurrently (both acquire gbrain-cycle), closing the "60-min floor double-processes queued targeted jobs" failure mode. Computation uses cheap path (D7) — engine.getHealth() + computeRecommendations, NOT a full doctor walk. Adds ~1 SQL count query per tick; negligible on a 50K-page brain. PROTECTED handlers (synthesize/patterns/consolidate) are submitted with allowProtectedSubmit:true; autopilot is a trusted local caller. Cycle purge phase (src/core/cycle.ts): Added op_checkpoints GC (+C folded scope item). 7-day TTL — any reasonable long-running op finishes inside that window. Non-fatal on pre-v67 brains (table missing). Plan: ~/.claude/plans/system-instruction-you-are-working-fluttering-ocean.md (T8 + D7/D9/D10 + codex #17 + folded scope +C). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test(core): brain-score-recommendations + op-checkpoint unit tests T10 of brain-health-100 wave — load-bearing decision-pinning tests. test/brain-score-recommendations.test.ts (22 cases): - Healthy brain → empty plan - Per-component remediation paths (sync, embed, backlinks, extract) - depends_on wiring (extract → sync; embed → sync when stale) - Severity ordering (critical > high > medium > low) - D6 #5 determinism: same input twice → byte-identical output - D9 idempotency keys: content-hash format, no time-slot - D9 source isolation: different --source → different key - D13 status field always 'remediable' in output - +A cost-estimate populated for embed - classifyChecks: remediable / blocked / human_only triage - maxReachableScore: all-remediable → 100; all-blocked → current test/op-checkpoint.test.ts (20 cases): - fingerprint stability + key-order invariance (canonical-JSON) - codex #11: extract links vs timeline get different fingerprints - codex #12: reindex markdown vs code get different fingerprints - codex #15: embed model+dim variation produces different fingerprints - reindex chunker_version bump invalidates checkpoint - DB round-trip (load → record → load) - Cross-fingerprint isolation (linksKey vs timelineKey) - clearOpCheckpoint idempotency on missing rows - resumeFilter purity (no I/O, deterministic) - purgeStaleCheckpoints TTL respect 42 new tests, all pass. PGLite engine + resetPgliteState pattern per CLAUDE.md test-isolation guide. Plan: ~/.claude/plans/system-instruction-you-are-working-fluttering-ocean.md (T10 + D6 #5 + D9 + D12 + D13 + codex #11/#12/#15). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore(release): v0.36.0.0 — brain-health-100 wave + docs/llms refresh T12 of brain-health-100 wave. VERSION + package.json bumped 0.35.6.0 → 0.36.0.0. CHANGELOG entry leads ELI10 ("your agent can now drive your brain to 90/100 by itself, on a cron, without you watching") then drills into the precise mechanics per CLAUDE.md voice rules. llms.txt + llms-full.txt regenerated via bun run build:llms. Trio audit (CLAUDE.md mandatory pre-push check): VERSION: 0.36.0.0 package.json: 0.36.0.0 CHANGELOG: ## [0.36.0.0] - 2026-05-18 Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: update README/CLAUDE/AGENTS/maintain for v0.36.4.0 brain-health-100 wave - README.md: New-in-v0.36.4.0 callout — `gbrain doctor --remediate` headline, autopilot health-aware tick, eleven new background-job types, three PROTECTED. - CLAUDE.md: Key Files entries for `op-checkpoint.ts`, `brain-score-recommendations.ts`, doctor.ts / jobs.ts / protected-names.ts / autopilot.ts / cycle.ts / embed.ts / cli-options.ts extensions; new "Key commands added in v0.36.4.0" section. - AGENTS.md: Common-tasks entry pointing agents at the one-command remediation loop. - skills/maintain/SKILL.md: Autonomous Phase (gbrain doctor --remediate) at the top, manual per-dimension walk preserved as the fallback path. - llms-full.txt: regenerated to pick up the CLAUDE.md changes (project rule). Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> * docs(changelog): respectful tone on spend caps for v0.36.4.0 Reframed the cost-budget callout. Pre-fix language said the spend cap prevents a synthesize loop from "burning $100 of Anthropic credits while you're at lunch" — casually treating $100 as the throwaway number is tone-deaf. $100 is a meaningful amount for many people. New language: "spend cap so a synthesize loop can't run up your Anthropic bill while you're at lunch. The cap is yours to set per run." And: "Pass --max-usd 5 (or whatever cap you're comfortable with)." And: "Pick the cap that fits your wallet." Also reframed three adjacent lines: - "healthy brains stop burning cycles" → "stop spending tokens on work that has nothing to do" - "agent can't submit them and burn your API budget" → "can't submit them on your behalf. Your provider bill stays in your hands" - Table cell "Cron with cost cap" / "--max-usd 5" → "Cron with spend cap" / "--max-usd N" llms-full.txt regenerated to match. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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3aedffadc0 |
fix(docs): comprehensive drift audit — contradictions, broken links, stale refs (#1201)
A community member reported docs 'have quite a bit of drift and some broken
links' and contradictions like 'says don't use bun but also to use bun.' This
PR is a top-to-bottom audit + fix across every doc file at the repo root and
under docs/. Where docs disagreed with each other, the code was the tie-breaker.
## Categories of fix
### 1. Stale CLI commands (skillpack install → scaffold)
`gbrain skillpack install` was retired in v0.36.0.0 (replaced by the
scaffold/reference/migrate-fence model). The CLI now errors out with a hint:
$ gbrain skillpack install
Error: 'gbrain skillpack install' was removed in v0.33.
Use 'gbrain skillpack scaffold <name>' instead.
But the docs still recommended it:
- README.md line 29 — primary install path
- docs/INSTALL.md lines 12 — primary install path
Both updated to `gbrain skillpack scaffold --all` with the v0.36.0.0 retirement
explained inline + the migrate-fence escape hatch for users upgrading from older
releases.
### 2. The 'bun install -g vs bun link' contradiction
The community member's exact complaint. The drift:
- README.md + docs/INSTALL.md: recommended `bun install -g github:garrytan/gbrain`
- INSTALL_FOR_AGENTS.md line 29: 'Do NOT use `bun install -g github:garrytan/gbrain`.'
Reading the code + CHANGELOG: `bun install -g` IS the canonical path. Bun
occasionally blocks the top-level postinstall hook on global installs (issue #218),
but the postinstall now prints a loud recovery hint when that happens, and
`gbrain doctor` flags `schema_version: 0` and routes users to
`gbrain apply-migrations --yes`. The 'do not use' warning was correct in 2024
when the postinstall silently swallowed errors with `|| true`; it's stale now.
Reconciled:
- INSTALL_FOR_AGENTS.md Step 1: now recommends `bun install -g` as the primary
path, documents #218 as a known issue with the recovery command, and keeps
`git clone + bun link` as a documented fallback.
- AGENTS.md Install (5 min): same reconciliation; clone path is the fallback,
not the default.
- docs/INSTALL.md CLI standalone: added the #218 callout so the deterministic
fallback is one click away when the default fails.
### 3. Broken internal links
- README.md → `docs/integrations/voice.md` (file doesn't exist). The real voice
recipe lives at `recipes/twilio-voice-brain.md` (Twilio + OpenAI Realtime).
Fixed to point there with an accurate one-line summary.
- CONTRIBUTING.md → `docs/SQLITE_ENGINE.md` (file doesn't exist; superseded by
PGLite per docs/ENGINES.md). Replaced with a paragraph explaining the
supersession and pointing at the live ENGINES.md.
- docs/GBRAIN_V0.md → `docs/SQLITE_ENGINE.md` (2 references; same supersession).
Added a historical-doc banner at the top + rewrote both references to point at
the current ENGINES.md.
### 4. Stale API key recommendations
INSTALL_FOR_AGENTS.md Step 2 only mentioned OpenAI + Anthropic. As of v0.36.2.0
ZeroEntropy is the default embedding + reranker stack (README opens with this);
the agent install guide didn't reflect it. Added `ZEROENTROPY_API_KEY` as the
default, kept OpenAI/Voyage as documented fallbacks, noted that keys can live in
`~/.gbrain/config.json` (file plane) or env.
### 5. Stale upgrade workflow
INSTALL_FOR_AGENTS.md 'Upgrade' section assumed the clone+bun-install model
(`cd ~/gbrain && git pull && bun install && gbrain init && gbrain post-upgrade`)
and didn't mention `gbrain upgrade` (the single-command path that exists in the
CLI today: binary self-update + schema migrations + post-upgrade prompts in one).
Split into two paths — `gbrain upgrade` for the bun-install-g case (now the
default per Step 1), clone-path for the fallback case.
Also fixed AGENTS.md 'Migrate' bullet (was `gbrain apply-migrations` only;
now leads with `gbrain upgrade` and keeps apply-migrations as the manual
schema-only path).
### 6. Stale cron-workflow
INSTALL_FOR_AGENTS.md Step 7 referenced cron docs but didn't mention
`gbrain autopilot --install` (the built-in self-maintaining daemon that
exists in the CLI today) or `gbrain sync --watch` (continuous loop). Added
both as alternatives to platform-cron glue.
### 7. ZeroEntropy version typo
docs/INSTALL.md said 'the v0.36.0.0 ZE switch' — ZE landed in v0.36.2.0
(v0.36.0.0 was the skillpack-scaffold retirement). Fixed.
## What I did NOT change
- CHANGELOG.md, CLAUDE.md, TODOS.md prose mentions of historical commands like
`gbrain skillpack install` are correct as history — they're documenting what
was true in past releases. Only forward-looking docs got updated.
- The 'broken link' false-positive matches in CHANGELOG / CLAUDE / TODOS are
inside code-fence examples or regex patterns (`[Name](people/slug)`,
`[a-z0-9](?:[a-z0-9-]{0,30}[a-z0-9])`, `[--json](interrupted)`); they're
illustrative syntax, not real links. Leaving alone.
- llms.txt / llms-full.txt regenerated via `bun run build:llms` so the
agent-fetch documentation map matches the new content.
## Verification
- `bun run src/cli.ts --help` cross-checked against every command/flag the
install docs reference: init, doctor, apply-migrations, upgrade, post-upgrade,
skillpack scaffold/reference/migrate-fence, embed --stale, sync --watch,
autopilot --install, dream, integrations list, extract links/timeline,
graph-query, query, search modes — all real, all current.
- `bun run src/cli.ts skillpack install` confirmed to error out with the
retirement hint pointing at scaffold (proves the README guidance was actively
misleading users into a dead-end).
- Re-ran the broken-internal-link scanner across all root .md + docs/**/*.md;
zero real broken links remain (5 residual matches are illustrative syntax
inside prose, not actionable links).
Co-authored-by: garrytan-agents <agents@garrytan-agents.local>
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cdba533a04 |
v0.36.2.0 feat: ZeroEntropy as default + zero-based README rewrite (#1136)
* feat(dims): OpenAI text-embedding-3 Matryoshka range validation (D13) dimsProviderOptions now fail-loud at the embed boundary when the configured embedding_dimensions is outside the model's native range (1..1536 for -small, 1..3072 for -large). Paste-ready fix hint in the AIConfigError.fix field. Closes the silent-HTTP-400 path that would have bit OpenAI-fallback users on v0.36.0.0 ZE-default installs. 16 new test cases in test/ai/dims-openai.test.ts pinning the contract across native-openai and openai-compatible adapter paths. * feat(ai): flip defaults to ZeroEntropy zembed-1 1280d + zerank-2 reranker Default embedding model is now zeroentropyai:zembed-1 at 1280d via Matryoshka. Real-corpus benchmark: 2.2x faster than OpenAI, 2.6x cheaper at regular pricing, wins 11/20 head-to-head queries. 1280 is the closest valid ZE Matryoshka step to the prior OpenAI 1536d default (valid set: 2560/1280/640/320/160/80/40). 1024 (Voyage's step) is NOT on ZE's list — pinned by AIConfigError fail-loud in dims.ts. balanced mode bundle now defaults reranker_enabled=true. zerank-2 reshuffles 60% of top-1 results in benchmarks. Missing-key fail-open contract in src/core/search/rerank.ts handles unauthenticated cases. Opt out with: gbrain config set search.reranker.enabled false Existing tests updated (gateway.test.ts, search-mode.test.ts) and a new test/balanced-reranker-default.test.ts (10 cases) pins the fail- open invariants. * feat(retrieval-upgrade): RetrievalUpgradePlanner + interactive prompt UX New src/core/retrieval-upgrade-planner.ts is the consolidated planner that computes the brain's pending retrieval-upgrade work (chunker bumps + ZE switch) in one pass and applies the schema transition + config updates atomically. Tagged-union ApplyResult enum (D15): 'applied' | 'skipped_already_ applied' | 'skipped_no_work' | 'declined' | 'planned' | 'failed'. No string-parsing reasons. Three config keys (D12): ze_switch_prompt_shown (UI state), ze_switch_requested (user intent), ze_switch_applied (work done). Plus ze_switch_previous_snapshot (JSON, full prior config for --undo per D16) and ze_switch_declined_at (90-day re-ask window). Schema transition (D18) is atomic: DROP indexes + ALTER COLUMN + CREATE INDEX inside a single engine.transaction(). HNSW recreation is part of the same transaction — no silent slow-search window. C3 eligibility logic: ze_switch_offered iff NOT on ZE + NOT declined recently + NOT applied + (legacy default OR >100 pages). C4 cost math: MAX(chunker_pending, dim_pending) not SUM — one re-embed pass invalidates both surfaces simultaneously. New src/core/retrieval-upgrade-prompt.ts wires the planner to a TTY-only interactive prompt with two-line cost split (D10) and privacy callout for the reranker flip. Tests: test/retrieval-upgrade-planner.test.ts (24 cases) pins the state machine. test/asymmetric-encoding-contract.test.ts (6 cases) pins D17: search read path uses gateway.embedQuery() not embed(), asserted via __setEmbedTransportForTests mock. * feat(cli): gbrain ze-switch — manual lever for the ZE switch New gbrain ze-switch CLI with --dry-run, --json, --resume, --force, --undo, --non-interactive, --confirm-reembed, --ignore-missing-key flags. Mirrors the upgrade prompt's UX symmetry: --undo presents a cost-warning before re-embedding back to the prior width. src/cli.ts: dispatch case + CLI_ONLY entry. ze-switch owns its own engine lifecycle (mirrors the doctor pattern). test/ze-switch-cli.test.ts (11 cases): --help, --dry-run, --json, --non-interactive, --ignore-missing-key, --resume, --undo, --confirm-reembed. Uses captureExit harness to test process.exit() paths without breaking the test process. * feat(doctor): ze_embedding_health + embedding_width_consistency checks Two new doctor checks (D-A5): ze_embedding_health: when embedding_model starts with zeroentropyai:, verify ZEROENTROPY_API_KEY is set (env or config). Paste-ready setup hint with the signup URL on failure. embedding_width_consistency: cross-check that the configured embedding_dimensions matches the actual vector(N) column width on content_chunks.embedding. Catches the half-applied switch state (schema migrated but config write crashed) with a paste-ready gbrain ze-switch --resume hint. Wired into runDoctor between reranker_health and the existing sync_freshness checks. Both checks gracefully no-op on non-ZE embedding configs. test/doctor-ze-checks.test.ts (8 cases) pins both checks across happy + missing-key + missing-config + drift paths. Uses withEnv() helper to clear ZEROENTROPY_API_KEY for the no-key path so tests are hermetic against contributor env state. test/e2e/v0_28_5-fix-wave.test.ts + test/openai-compat-multimodal.test.ts: updated to explicit-configure the gateway when the test depends on specific dims that diverge from the v0.36.0.0 default (1280d). * docs: README zero-based rewrite (884 -> 139 lines) + new docs files Strip 4 months of accreted "New in v0.X.Y" hero blocks and reorganize around what gbrain does today. 33 H2s -> 8. The Commands section (136 lines duplicating gbrain --help) moved out; the 6-table skills enumeration collapsed to a one-paragraph capability description with a link to skills/RESOLVER.md. Hero retains load-bearing facts: OpenClaw + Hermes credit, production numbers (17,888 pages / 4,383 people / 723 companies), BrainBench numbers (P@5 49.1% / R@5 97.9% / +31.4 lift), ZE comparison numbers, 30-min install claim. Adds one paragraph announcing the v0.36.0.0 ZE default with the explicit gbrain config set escape for OpenAI/Voyage users. New files: - docs/INSTALL.md: every install path consolidated (agent platform, CLI standalone, MCP server). Thin-client mode covered. - docs/architecture/RETRIEVAL.md: why the hybrid + graph stack works. BrainBench numbers, why each strategy alone fails, the source-aware ranking + intent classification + multi-query expansion story. - docs/ethos/ORIGIN.md: origin story lifted from the old README so the front door stays factual + concrete. test/readme-hero-anchors.test.ts (5 cases) is the D9 regression guard. Five load-bearing strings: OpenClaw, Hermes, ZE, production-numbers regex, P@5/R@5. Light anchors that let voice/ structure evolve but block accidental loss of headline facts. scripts/check-test-real-names.sh: allowlist entries for OpenClaw + Hermes literals in the anchor test (it explicitly asserts those strings appear in README). * chore: bump version and changelog (v0.36.0.0) ZeroEntropy as the new default for embedding (zembed-1 at 1280d via Matryoshka) and reranker (zerank-2 cross-encoder, on by default in balanced mode bundle). README zero-based rewrite (884 -> 139 lines). 3 new docs files. Two new doctor checks. New gbrain ze-switch CLI with --undo for symmetric reversibility. skills/migrations/v0.36.0.0.md tells the agent how to surface the retrieval-upgrade prompt post-upgrade. llms-full.txt regenerated via bun run build:llms. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix(docs): scrub Wintermute from RETRIEVAL.md per privacy rule * chore: rebump version 0.36.0.0 → 0.36.2.0 (queue collision) Three open PRs were claiming v0.36.0.0 (#1130 skillpack, #1139 hindsight, #1136 this PR). Ship-aware queue allocator says this branch lands at v0.36.2.0. Trio audit: VERSION 0.36.2.0 package.json 0.36.2.0 CHANGELOG ## [0.36.2.0] - 2026-05-17 Updates: VERSION, package.json, CHANGELOG header + body refs, README "New default in v0.36.2.0" announcement + credit line, skills/migrations/v0.36.0.0.md renamed to v0.36.2.0.md with frontmatter + body refs updated. llms-full.txt regenerated. * fix(test): pin gateway dim=1536 in cross-file-stateful PGLite tests CI shard 1 reported 10 failures across `query-cache.test.ts` (6) and `consolidate-valid-until.test.ts` (4). Both files hardcode 1536-dim vectors but rely on `PGLiteEngine.initSchema()` to size `vector(__EMBEDDING_DIMS__)` at the right width. Root cause: v0.36.2.0 flipped DEFAULT_EMBEDDING_DIMENSIONS from 1536 to 1280 (ZE Matryoshka step). The gateway module is process-singleton; when ANOTHER test file in the same shard's bun-test process configures the gateway before us, `pglite-engine.ts:216` reads `getEmbeddingDimensions() === 1280` and sizes the schema columns at vector(1280). The hardcoded 1536-dim INSERTs then fail with "expected 1280 dimensions, not 1536". Locally these tests pass in isolation because the gateway falls back through the try/catch at pglite-engine.ts:218 (1536 default). CI runs multiple test files in one process, so cross-file state poisons the schema width. Fix: explicit `resetGateway()` + `configureGateway({embedding_dimensions: 1536, ...})` at the top of `beforeAll`, plus `resetGateway()` in `afterAll`. Pins the schema width regardless of cross-file state. --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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3a0e1116e7 |
v0.36.1.0 Hindsight calibration wave: brain learns how you tend to be wrong (#1139)
* schema: v0.36.0.0 Hindsight calibration tables (migrations v67-v71) Foundation commit for the Hindsight-inspired calibration wave. Adds four new tables + one perf index, all source-scoped from day 1 per v0.34.1 discipline: - calibration_profiles (v67): per-holder LLM-narrative aggregation of TakesScorecard data. published BOOL gates E8 cross-brain mount sharing (default false). grade_completion REAL surfaces partial-grade state to the dashboard. active_bias_tags TEXT[] with GIN index feeds E3 (calibration- aware contradictions) and E7 (real-time nudge matching). - take_proposals (v68): propose_takes phase queue. Idempotency cache via (source_id, page_slug, content_hash, prompt_version) unique index mirrors the v0.23 dream_verdicts pattern. proposal_run_id supports --rollback by run. dedup_against_fence_rows JSONB audit column records what canonical takes the LLM was told to dedupe against at proposal time. - take_grade_cache (v69): grade_takes verdict cache. Composite PK on (take_id, prompt_version, judge_model_id, evidence_signature) — prompt edits OR evidence changes cleanly invalidate prior verdicts. applied=false default + auto-resolve-off-by-default (D17) means every fresh install needs operator opt-in before grade verdicts mutate the takes table. - take_nudge_log (v70): E7 nudge cooldown state. Polymorphic FK — a nudge fires on either a canonical take OR a pending proposal (CDX-5 fix). CHECK constraint enforces exactly-one-set. channel column lets future routing (webhook, admin SPA toast) reuse the same cooldown semantics. - takes_resolved_at_idx (v71): partial index for the Brier-trend aggregation queries. Engine-aware handler — Postgres uses CONCURRENTLY to avoid the ShareLock; PGLite uses plain CREATE. Every table carries wave_version TEXT NOT NULL DEFAULT 'v0.36.0.0' so the v0.36.0.0 calibration --undo-wave command (lands later in the wave) can reverse just this wave's writes. Plan: ~/.claude/plans/system-instruction-you-are-working-rippling-knuth.md covers the design rationale (D17/D18/D21 + CDX findings). Schema parity: - src/schema.sql for fresh Postgres installs - src/core/pglite-schema.ts for fresh PGLite installs - src/core/schema-embedded.ts auto-regenerated from schema.sql - src/core/migrate.ts for upgrade-in-place from older brains VERSION bumped to 0.36.0.0 for the wave. CHANGELOG entry lands at /ship. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * core: BaseCyclePhase abstract class enforces source-scope + budget contracts D21 from the eng review. Three new v0.36.0.0 cycle phases (propose_takes, grade_takes, calibration_profile) share enough structure that the duplication-vs-abstraction trade tips toward a shared base. Without this scaffold, source-isolation discipline would drift exactly the way it drifted in v0.34.1 — except this time across three new surfaces at once. What this enforces: 1. Phase signature is uniform: run(ctx, opts) → PhaseResult. 2. ctx.sourceId / ctx.auth.allowedSources MUST be threaded through every engine call. The base class surfaces a scope() helper that wraps sourceScopeOpts(ctx) and is the only sanctioned way to read source- scoped data. Forgetting to thread source scope becomes a TypeScript compile error, not a runtime leak. Closes the v0.34.1 leak class structurally for every new phase. 3. Budget meter wraps run() automatically. Subclass declares budgetUsdKey + budgetUsdDefault; base reads the resolved cap from config and creates the BudgetMeter. Subclass calls this.checkBudget() before each LLM submit; budget-exhausted phase still returns status='ok' (clean abort) so the cycle report shows partial completion, not failure. 4. Error envelope is uniform. Thrown errors get caught and converted to status='fail' with a phase-specific error.code via the subclass's mapErrorCode() hook. 5. Progress reporter integration. Base accepts the reporter via opts; subclasses call this.tick() instead of touching the reporter directly, so the phase name in the progress stream is always correct. Tests: 13 cases in test/core/base-phase.test.ts cover source-scope threading (5 cases including the empty-allowedSources-MUST-NOT-widen-scope regression), PhaseResult shape including the error envelope path (3 cases), dry-run propagation (2 cases), and budget meter construction (3 cases including config-key override). Synthesize.ts / patterns.ts (existing pre-v0.36 phases) deliberately do NOT retrofit to this base in v0.36.0.0 — too much churn for a refactor that doesn't pay off until v0.37+. Future phases use this by default. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * cycle: propose_takes phase + take_proposals queue write path (T3) LLM-based take extraction from markdown prose. Walks pages updated since last cycle, sends each page's body to a tuned extractor, writes the extracted gradeable claims to the take_proposals queue. User accepts / rejects via `gbrain takes propose --review` (lands in Lane C). Cycle wiring: lint → backlinks → sync → synthesize → extract → extract_facts → resolve_symbol_edges → patterns → recompute_emotional_weight → consolidate → propose_takes (NEW) → grade_takes (NEW; T4) → calibration_profile (NEW; T6) → embed → orphans → purge CyclePhase enum extended with 3 new entries; ALL_PHASES + NEEDS_LOCK_PHASES updated. All three new phases acquire the cycle lock (writes to take_proposals / take_grade_cache / calibration_profiles). Idempotency contract: The (source_id, page_slug, content_hash, prompt_version) composite unique index on take_proposals means an unchanged page never re-spends LLM tokens. Bumping PROPOSE_TAKES_PROMPT_VERSION cleanly invalidates the cache so a tuned prompt re-runs proposals on every page. Mirrors the v0.23 dream_verdicts pattern. F2 fence dedup: The phase reads the page's existing `<!-- gbrain:takes:begin -->` fence (when present) and passes the canonical take rows to the extractor as "things you have already captured." Prevents duplicate proposals when prose is appended to a page that already has takes. Records the fence rows the LLM was told to dedupe against on the take_proposals row for audit (dedup_against_fence_rows JSONB). Auto-resolve posture: propose_takes only WRITES proposals to the queue. Nothing in this phase mutates the canonical takes table. Operator opt-in via the queue review CLI (Lane C) is the only path from queue to canonical fence (D17). Prompt tuning status (v0.36.0.0 ship state): The default extractor prompt is annotated `v0.36.0.0-stub`. The real tuned prompt arrives via T19 synthetic corpus build (50 anonymized pages, 3-model parallel extraction, user reviews disagreement set, F1 ≥ 0.85 on training corpus + F1 ≥ 0.8 on ground-truth holdout). Until T19 lands, propose_takes runs but produces best-effort candidates the user reviews manually. Architecture: ProposeTakesPhase extends BaseCyclePhase (T2). Inherits source-scope threading via scope(), budget metering via this.checkBudget(), error envelope wrapping. budgetUsdKey: cycle.propose_takes.budget_usd (default $5/cycle). Budget exhaustion mid-page returns status='warn' with details.budget_exhausted=true — clean partial-completion semantics. Test seam: opts.extractor injection so the phase can run hermetically without touching the gateway. defaultExtractor (production path) calls gateway.chat with the EXTRACT_TAKES_PROMPT and parses the JSON array output via parseExtractorOutput. parseExtractorOutput defends against common LLM output sins: markdown code fence wrapping, leading prose, single-object instead of array, unknown kind values, weight out of [0,1], rows missing claim_text or exceeding 500 chars. Tests: 25 cases in test/propose-takes.test.ts cover the 4 pure helpers (parseExtractorOutput, contentHash, hasCompleteFence, extractExistingTakesForDedup) + 7 phase integration scenarios (happy path, cache hit, fence dedup, extractor failure, empty pages, skipPagesWithFence, proposal_run_id stability). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * cycle: grade_takes phase + take_grade_cache verdict pipeline (T4) Walks unresolved takes that are old enough to have outcome data, retrieves evidence from the brain, asks a judge model to verdict each one. Writes verdicts to take_grade_cache. Optionally — only when operator has flipped the opt-in config flag — auto-applies high-confidence verdicts to the canonical takes table via engine.resolveTake. Auto-resolve posture (D17 — DISABLED by default): On a fresh install, grade_takes runs and writes verdicts to the cache, but applied=false on every row. Operator reviews the queue, then flips `cycle.grade_takes.auto_resolve.enabled: true` once trust is earned. Mirrors the propose_takes review-queue posture: queue exists, mutation requires explicit opt-in. Conservative threshold (D12): When auto_resolve.enabled is true, a verdict auto-applies only when confidence >= 0.95 (single-judge path). T5 ensemble path lands next, tightening this further with 3/3 unanimous requirement. 'unresolvable' verdict NEVER auto-applies even at confidence=1.0 — there's no canonical column for "we tried and there's no evidence yet." Evidence retrieval status (v0.36.0.0 ship state): The default evidence retriever returns an "evidence-retrieval not yet wired" placeholder. Most verdicts produced by the stub-judge against the stub-evidence will be 'unresolvable'. Real retrieval (hybrid search over pages newer than the take's since_date, optionally augmented by a gateway web-search recipe in v0.37+) lands as a follow-up. Documented limitation per CDX-8 + D17 — the phase ships now so the wiring is real and the cache table accumulates verdicts even if early ones are conservative. Cache key: Composite primary key on take_grade_cache is (take_id, prompt_version, judge_model_id, evidence_signature). Prompt edits OR evidence changes OR judge swap cleanly invalidate prior verdicts. Mirrors the v0.32.6 eval_contradictions_cache pattern. evidence_signature = SHA-256 of (judge_model_id + '|' + evidence_text) so identical evidence under a different judge does NOT collide. Architecture: GradeTakesPhase extends BaseCyclePhase. Inherits source-scope threading, budget metering (cycle.grade_takes.budget_usd, default $3/cycle), error envelope. Test seam: opts.judge + opts.evidenceRetriever injection so the phase runs hermetically. parseJudgeOutput defends against fence-wrapping, leading prose, out-of-range confidence (clamps to [0,1]), invalid verdict labels, oversized reasoning (truncated at 400 chars). Returns null on unrecoverable parse — caller treats null as "judge_output_parse_failed / unresolvable at confidence 0.0" so the row still lands in cache with the parse failure surfaced via warnings. takeIsOldEnough gates on since_date (default 6 months). Tolerates YYYY-MM-DD and YYYY-MM formats. Returns false on null/unparseable since_date so takes without dates never get graded (we'd be hallucinating temporal context). Tests: 23 cases covering parseJudgeOutput (7 cases), evidenceSignature (3), takeIsOldEnough (5), and 8 phase integration scenarios — happy path, D17 auto-resolve-off default, D12 above-threshold auto-apply, below- threshold cache-only, unresolvable-NEVER-applies, cache hit, too-recent gate, judge-throw warning. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * cycle: grade_takes ensemble tiebreaker for borderline verdicts (T5 / E2) Multi-judge ensemble tiebreaker, additive on top of T4's single-judge foundation. Reuses gateway.chat as the per-model judge interface; runs three judges in parallel via Promise.allSettled. Pure aggregation logic in aggregateEnsemble() — no SQL, no LLM, hermetically testable. When ensemble fires (T5 trigger band): Only when ALL of: - opts.useEnsemble === true (default false) - opts.ensembleJudges array is non-empty - single-model confidence in [0.6, 0.95) (configurable via opts.ensembleTriggerBand) - single-model verdict !== 'unresolvable' Above 0.95 the single judge is already sufficient (T4 path). Below 0.6 the verdict is clearly review-only — ensemble wouldn't change the posture. 'unresolvable' from single-judge means no evidence yet; calling three more judges on the same evidence won't manufacture some. Conservative auto-apply (D12): Ensemble verdict auto-applies via engine.resolveTake only when ALL of: - autoResolve === true (operator opt-in per D17) - ensemble.agreement === 3 (3/3 unanimous) - ensemble.minConfidence >= ensembleThreshold (default 0.85) - winning verdict !== 'unresolvable' Schema-level monotonic-tightening guard for ensembleThreshold lives in the takes resolution layer. Cache identity: When ensemble fires, the cache row's judge_model_id becomes 'ensemble:<modelA>+<modelB>+<modelC>' — a future re-run with different ensemble membership doesn't collide with prior verdicts. evidence_signature is recomputed because it includes the judge_model_id. aggregateEnsemble (pure): - 3/3 unanimous → agreement=3, minConfidence=min across the three - 2/3 majority → agreement=2, minConfidence across the agreeing two - 1/1/1 disagreement → tie-break: prefer non-'unresolvable', then alphabetical for determinism - 'unresolvable' from one model NEVER tips a 2-vote majority toward 'unresolvable' — by-label tally only counts a model toward its own label - All three judges failing (allSettled rejected) → verdict='unresolvable' with agreement=0; auto-apply path blocked - Single judge survives + two fail → agreement=1; the lone verdict wins but auto-apply gated by the 3/3 requirement Tests: 16 cases. aggregateEnsemble (6): 3/3, 2/3, 1/1/1, unresolvable-tipping-resistance, all-failed, partial-failed-but-survives. Phase trigger conditions (5): useEnsemble=false default, useEnsemble=true in borderline band, single >= 0.95 skip, single < 0.6 skip, single = 'unresolvable' skip. Phase auto-apply rules (5): 3/3+threshold+autoResolve, 2/3 majority no apply, 3/3 below threshold no apply, one ensemble judge throws still aggregates from allSettled, empty ensembleJudges falls through to single. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * cycle: calibration_profile phase + shared voice gate across surfaces (T6) The calibration narrative layer. Reads TakesScorecard, asks an LLM to write 2-4 conversational pattern statements ("right on tactics, late on macro by 18 months"), passes them through the voice gate, derives active bias tags, writes the row to calibration_profiles. This is the read-side that E1 (think anti-bias rewrite), E3 (contradictions join), E6 (dashboard), and E7 (real-time nudges) all consume. Voice gate (D24 — single function, multiple surfaces): ALL five calibration UX surfaces import the same gateVoice() function from src/core/calibration/voice-gate.ts. Mode parameter ('pattern_statement' | 'nudge' | 'forecast_blurb' | 'dashboard_caption' | 'morning_pulse') drives surface-specific tuning via the rubric the gate ships to its Haiku judge. NO forked implementations — voice rubric drift would defeat the gate. Each mode's rubric explicitly forbids preachy / clinical / corporate voice; a structural test pins this. Anchors the cross-cutting voice rule from /plan-ceo-review D2-D8. Fallback policy (D11): Up to 2 generation attempts (configurable). On both rejects → fall back to a hand-written template from src/core/calibration/templates.ts. Templates are intentionally short and a little "robotic" — they're the safety net, not the destination. voice_gate_passed=false + voice_gate_attempts get persisted on the calibration_profiles row so the operator can review the failing examples and tune the rubric over time. Suppressing the surface silently is NEVER an option — that's how voice quality silently degrades. parseJudgeOutput defaults to 'academic' on parse failure (NEVER passes pass-through) so a Haiku output garble falls through to the template rather than letting unverified text reach the user. calibration_profile phase: Extends BaseCyclePhase. Cold-brain skip: <5 resolved takes → no row written, no LLM call. Otherwise: scorecard via engine.getScorecard() → patterns via voice-gated generator → bias tags via separate generator (best-effort; failure logs warning, phase continues). The DB INSERT lands in the v67 calibration_profiles row with source_id, holder, the patterns, voice gate audit fields, active bias tags, and grade_completion (F1 fix — partial-grade state surfaces to the dashboard "60% graded" badge). Budget gate at $0.50/cycle default (mostly Haiku). Below-budget before-LLM-call check returns status='warn' without writing the row. Per-domain scorecards are a placeholder for v0.36.0.0 ship state — the F12 batchGetTakesScorecards() engine method that powers per-domain rendering lands in Lane C alongside the CLI/MCP surface. Architecture: parsePatternStatementsOutput is tolerant of LLM emitting numbered lists / bulleted lines despite the prompt asking for plain lines. Caps at 4 patterns + drops excessively long lines (>200 chars). parseBiasTagsOutput lowercases input + drops non-kebab-case tokens (defends against the LLM emitting "Over-Confident Geography" with spaces or capitals). Caps at 4 tags. Tests: 43 cases across two new test files. voice-gate.test.ts (24): parseJudgeOutput (7), gateVoice happy path (3), fallback path (5), mode parity (2), templates (7). calibration-profile.test.ts (19): parsers (10), pickFallbackSlots (3), phase integration (6 — cold-brain skip, happy path, voice gate fallback, grade_completion plumbed through, bias-tags failure non-fatal, source_id scope reaches INSERT). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * cli: gbrain calibration + get_calibration_profile MCP op (T7) Public-facing read surface for the v0.36.0.0 calibration wave. CLI prints the active calibration profile; MCP op exposes the same data path for agents. Mirror of the v0.29 salience/anomalies shape (pure data fn + JSON formatter + human formatter + thin CLI dispatch). CLI: `gbrain calibration` Flags: --holder <id> specific holder (default 'garry') --json machine output for piping --regenerate run calibration_profile phase now --undo-wave <ver> [placeholder — wires in Lane D / T17] ab-report [placeholder — wires in Lane D / T18] Human output: Calibration profile — holder: garry, source: default Generated: <local timestamp> [Note: built on 60% graded — partial completion this cycle.] (when grade_completion < 0.9) [Note: voice gate fell back to template (2 attempts).] (when voice_gate_passed=false) Resolved: 12 takes Brier: 0.210 (lower is better) Accuracy: 60.0% Partial: 10.0% Pattern statements: • You called early-stage tactics well — 8 of 10 held up. Active bias tags: over-confident-geography Cold-brain fallback message names the exact dream command to run. MCP: `get_calibration_profile` (scope: read) Param: holder?: string (defaults to 'garry') Returns: latest CalibrationProfileRow | null Source-scoping via sourceScopeOpts(ctx): scalar source-bound clients see only their source; federated_read scopes see the union of allowed sources; no source filter when neither is set (CLI default path). Throws GBrainError('INVALID_HOLDER') on empty/non-string holder so remote callers get a structured error instead of a SQL-shape failure. Architecture: getLatestProfile is the pure data fn — engine + opts → CalibrationProfileRow | null. Reused by both the CLI and the MCP op. Source-scoped via the standard v0.34.1 spread pattern (scalar sourceId vs sourceIds array). formatProfileText is pure — null → cold-brain message, populated → full printout. Annotates partial-grade rows and voice-gate-fallback rows so the operator sees data-quality status inline. parseArgs is exported via __testing for unit coverage. Sub-command ('ab-report') vs flag distinction is intentional — keeps the surface parallel with `gbrain eval cross-modal` etc. Tests: 21 cases. parseArgs (6 cases): empty, --holder, --json, --regenerate, --undo-wave, ab-report. getLatestProfile (5 cases): happy, null, scalar source scope, federated array scope, no-source-filter default. formatProfileText (5 cases): cold-brain, happy, partial-grade note, voice-fallback note, published-to-mounts note. getCalibrationProfileOp (5 cases): default holder, scalar source scope, federated scope union, returns-null-on-unknown-holder, throws on empty holder. Lane D follow-ups: --undo-wave (T17) and ab-report (T18) print a clear "lands in Lane D" stderr line + exit 2; the surfaces exist for early testers, the implementations land next. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * think: --with-calibration + anti-bias prompt rewrite (T8 / E1, D22) Optional anti-bias rewrite mode for `gbrain think`. When set, the active calibration profile gets injected per the D22 placement spec (AFTER retrieval evidence, BEFORE the user's question). The bias filter applies to QUESTION FRAMING, not evidence interpretation — matches LLM-as-judge best practice (bias prompts near end of context perform better). Default behavior unchanged (R1 regression guard): omitting --with-calibration produces the v0.28-vintage user-message shape with the question first, then retrieval. Existing think users see no change. Two user-message shapes in buildThinkUserMessage: Default (no calibration): Question: X <pages>...</pages> <takes>...</takes> <graph>...</graph> Respond with a single JSON object... With calibration (D22): <pages>...</pages> <takes>...</takes> <graph>...</graph> <calibration holder="garry"> Track record: Brier 0.210 (lower is better). Active patterns: - You called early-stage tactics well — 8 of 10 held up. Active bias tags: over-confident-geography </calibration> Question: X Respond... Calibration block is built by buildCalibrationBlock (exported for the E3 contradictions probe to render the same shape). System prompt extension (withCalibration:true): - Names BOTH the user's PRIOR (default reasoning) AND the COUNTER-PRIOR from their hedged-domain self. - References active bias tags by name when relevant ("this fits the over-confident-geography pattern"). - Does NOT silently substitute the debiased answer. ALWAYS surfaces both priors transparently. - Adds a "Calibration" section between Conflicts and Gaps in the answer body. RunThinkOpts extension: - withCalibration?: boolean — opt-in - calibrationHolder?: string — defaults to 'garry' When withCalibration=true and no profile exists, runThink falls back to baseline behavior + pushes NO_CALIBRATION_PROFILE to warnings (visible to the operator). When the calibration fetch fails, CALIBRATION_FETCH_FAILED warning surfaces with the underlying error. Either path keeps think working; the calibration loop is enhancement, not requirement. CLI: `gbrain think "<q>" --with-calibration [--calibration-holder <id>]` Tests: 11 cases. buildThinkSystemPrompt (4 cases): R1 regression — default/false/omitted → no anti-bias rules; with calibration → adds PRIOR + COUNTER-PRIOR + bias-tag reference; preserves existing hard rules. buildCalibrationBlock (3 cases): happy path, null brier omitted (not "Brier null"), empty patterns + tags still well-formed. buildThinkUserMessage (4 cases): R1 regression — without calibration: question first; D22 placement — retrieval → calibration → question → instruction; graph + calibration ordering; empty retrieval blocks render placeholders without breaking shape. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * contradictions: calibration-profile join (T9 / E3) Cross-references each contradiction finding against the active calibration profile. When a contradiction's domain matches an active bias tag (e.g. "over-confident-geography" or "late-on-macro-tech"), the output gains a one-line bias context explaining which pattern this fits. Pure functions only — no DB writes, no LLM calls. The probe runner imports tagFindingWithCalibration() and applies it to each finding before emitting. When no profile exists or no tags match, the helper returns null and the runner emits the unchanged finding (regression R2 — contradictions output is byte-identical to v0.32.6 when no calibration profile is present). Match heuristic (v0.36.0.0 ship-state): Bias tags are kebab-case axis-then-domain slugs ('over-confident-geography'). computeDomainHint() extracts a domain hint from the finding's slugs + holder + verdict text: - wiki/companies/... → hiring | market-timing - wiki/people/... → founder-behavior - macro / geography / tactics / ai segments in slug → matching tag First-match-wins for ordering determinism. Match is intentionally fuzzy — the v0.32.6 contradictions probe doesn't yet carry structured domain metadata. v0.37+ structured-domain-on-takes (Hindsight-style enum) tightens this. Output: Returns { bias_tag: string, context: string } | null. Context format: "This contradiction fits your active bias pattern \"<tag>\" (Brier 0.31). Verdict: contradiction; severity: medium. Consider reviewing both sides through the lens of that pattern." Tests: 13 cases. R2 regression (2): null profile → null tag; empty active_bias_tags → null tag. computeDomainHint (5): companies / people / macro / geography / unknown paths produce expected hints. Match path (4): macro→late-on-macro-tech, geography→over-confident-geography, mismatch returns null, first-match-wins with multiple candidate tags. buildBiasContextString (2): emits tag+verdict+severity+Brier; omits Brier when null (no "Brier null" leak). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * calibration: Brier-trend forecast at write time (T10 / E5) Pure math layer over existing TakesScorecard data. Zero new LLM cost, zero new schema. Surfaces the user's historical Brier for the take's (holder, domain) bucket at write time so they see "your historical Brier in macro takes is 0.31" before committing the take. Voice-gate-rendered output: The user-facing string goes through gateVoice mode='forecast_blurb' via templates.ts (already in T6). This module is the pure data layer; the template renders the math into the conversational voice. v0.36.0.0 ship state: Bucket dimension is the DOMAIN (slug-prefix). The conviction-weight bucket dimension would need a new engine method (engine.batchGetTakeBucketStats per F11) — deferred to v0.37+. Until then, forecast = historical Brier in this holder's domain. resolveDomainPrefix() keeps slug-prefix-looking domain hints ('companies/', 'wiki/macro') and falls back to overall for free-form hints ('macro tech', 'geography'). Hindsight-style structured domain on takes (CDX-11 mitigation TODO) tightens this in v0.37+. MIN_BUCKET_N = 5: Below this sample size, the forecast returns predicted_brier=null with insufficient_data=true. Template renders "Forecast unavailable: only N resolved takes at this conviction yet" instead of a noisy estimate. Architecture: computeForecast(input) — pure function, takes scorecards already fetched; ideal for tests + reuse across batched paths. forecastForTake(engine, input) — convenience wrapper, 1-2 engine round-trips (no domain → 1; with domain → 2). batchForecast(engine, inputs[]) — memoizes per (holder, domainPrefix); N inputs collapse to ≤2*unique_holders unique engine calls. Used by the propose-queue review flow (50 candidates → 1-2 scorecard fetches). Tests: 14 cases. computeForecast (4): insufficient_data branch, stable forecast, overall fallback, MIN_BUCKET_N export. resolveDomainPrefix (5): undefined/empty/whitespace → undefined; slug-prefix → kept; free-form → undefined. forecastForTake (3): 1-call overall, 2-call domain, free-form fallback. batchForecast (2): cache collapse for repeat queries; different holders do not collapse. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * calibration: gstack-learnings coupling on incorrect resolutions (T11 / E4) When the grade_takes phase auto-resolves a take as 'incorrect' or 'partial', optionally write a learning entry to gstack's per-project learnings.jsonl so other gstack skills (plan-ceo-review, ship, investigate, ...) can pull it as context when relevant. The brain teaches every other tool about the user's track record. Config gate (D5 / CDX-17 mitigation): `cycle.grade_takes.write_gstack_learnings` defaults FALSE. External users may not have gstack installed; the gstack-learnings binary API isn't stable yet. Garry's brain flips it true to opt in. Quality gate: Only 'incorrect' and 'partial' verdicts trigger the write. 'correct' resolutions are noise (we expected the take to hold up — no learning). 'unresolvable' has no canonical column. Defense-in-depth runtime guard in writeIncorrectResolution() rejects ineligible qualities with reason='quality_not_eligible' so a caller misuse never surfaces a malformed learning entry. Auto-apply only: Coupling fires only when grade_takes both auto-applies AND the verdict is incorrect/partial AND the config flag is enabled. Manual resolutions via `gbrain takes resolve` intentionally DO NOT propagate to gstack — manual writes already carry operator intent; the calibration loop is the noise-prone path that earns coupling. Namespace: Every entry's key starts with 'gbrain:calibration:v0.36.0.0:'. Lane D `gbrain calibration --undo-wave v0.36.0.0` (T17) filters on this prefix for the optional gstack-scrub step. First active bias tag suffixes the key (e.g. 'take-42:over-confident-geography') so future analysis can group learnings by bias pattern. Architecture: buildLearningEntry — pure. Truncates claim at 200 chars + ellipsis; emits Pattern: line when activeBiasTags present; defaults confidence to 0.8 when caller omits it. writeIncorrectResolution — async wrapper. Honors config gate; honors quality gate; calls the injected writer (or defaultGstackWriter in production). Failures are non-fatal: returns { written: false, reason: 'write_failed' | 'binary_missing', error }. The grade_takes phase logs to result.warnings and continues — gstack coupling failure NEVER aborts a cycle. defaultGstackWriter — shells out to gstack-learnings-log binary via execFileSync. Throws GBrainError('GSTACK_BINARY_NOT_FOUND') when the binary isn't on PATH; writeIncorrectResolution classifies that error to reason='binary_missing' so the operator sees the install hint instead of a generic write_failed. Wired into grade-takes.ts after engine.resolveTake() inside the auto-apply block. Only fires when shouldApply=true. Tests: 14 cases. buildLearningEntry (7): canonical shape, partial vs incorrect wording, bias-tag suffix, no-tag fallback, claim truncation, default confidence, no-reasoning omission. writeIncorrectResolution (7): config gate, quality gate, happy path, writer-throw graceful degrade, binary-missing classification, async writer awaited, partial quality writes. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * doctor: 4 calibration checks — abandoned/freshness/drift/voice (T12) Adds the four calibration doctor checks per the eng-review spec. abandoned_threads: Counts active high-conviction takes (weight >= 0.7) older than 12 months that have never been superseded. Signal, not error — always status='ok' with a count. The hint sends users to `gbrain calibration` for details. calibration_freshness: Warns when the active profile is older than 7 days (configurable via the same env-var pattern other freshness checks use). Cold-brain branch (no profile yet) returns ok without scolding. Hint points at `gbrain calibration --regenerate`. grade_confidence_drift (CDX-11 mitigation): Surfaces the count of auto-applied grade verdicts. Below 30: returns "need 30+ for drift detection". At/above 30: returns "drift math arrives in v0.37+". The surface is wired; the actual confidence-vs-accuracy correlation math is a v0.37+ follow-up once we have 30+ auto-applied verdicts to measure against. Closes the CDX-11 hole structurally — the operator sees the surface even before the math is meaningful. voice_gate_health: Tracks voice gate failure rate over the last 7 days. <30% fail rate → ok (template fallback is fine in isolation). >=30% → warn with hint to review src/core/calibration/voice-gate.ts rubric. Anchors the cross-cutting voice rule observability story. All four checks return status='warn' with a diagnostic message on engine errors — non-blocking, never throws. Matches the existing doctor check pattern (see checkSyncFreshness for prior art). Wired into runDoctor after checkRerankerHealth (the v0.35 cluster), in the canonical block 10 slot. Tests: 15 cases. 4 per check (happy path, alt-status, engine-throw diagnostic, plus boundary tests for the freshness staleness gate at exactly 7 days and the grade drift gate at 30 applied verdicts). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * calibration: E7 nudge + 14-day cooldown (T13 / D16 F3) Real-time pattern surfacing when a newly-committed high-conviction take matches an active bias pattern. Conversational nudge text via the templates module; 14-day cooldown per (take_id, nudge_pattern) via take_nudge_log to prevent the feedback loop where each cycle re-fires the same nudge on the same take. Threshold gates (D16 F3): - holder match (profile.holder === take.holder) - conviction-weight > 0.7 (strict greater than) - take's slug-derived domain hint matches an active bias tag (takeDomainHint — same heuristic as eval-contradictions/calibration-join.ts for cross-surface consistency) Cooldown gate: Before firing, probe take_nudge_log for (take_id, nudge_pattern) rows with fired_at >= now() - 14 days. Any hit → silently skip. After firing, insert a new row with channel='stderr' so the next 14 days are gated. Feedback-loop prevention: User hedges a take in response to a nudge (e.g. weight 0.85 → 0.65). Even though the take's `weight` field changed, the cooldown row for the over-confident-geography pattern is still there from the original fire — so the next cycle's evaluateAndFireNudge() silently skips. The user reset path (gbrain takes nudge --reset N) clears the cooldown to re-arm. Output channel (v0.36.0.0 ship state): STDERR only. Schema's `channel` column already supports multi-channel (webhook, admin SPA toast); routing those is a v0.37+ follow-up. Architecture: evaluateNudgeRule(take, profile) — pure rule check. Returns { matched, reason, matchedTag }. No engine call. checkCooldown(engine, takeId, pattern) — engine probe, returns boolean. recordNudgeFire(engine, opts) — INSERT into take_nudge_log. evaluateAndFireNudge(opts) — full pipeline. Returns NudgeDecision. resetNudgeCooldown(engine, takeId) — DELETE...RETURNING for the CLI. buildNudgeText delegates to templates.ts nudgeTemplate (D24 mode='nudge' voice). v0.36.0.0 ship state uses the template directly; LLM-generated nudge text via the voice gate lands in v0.37+ when we have production examples to tune from. Tests: 22 cases. takeDomainHint (5): companies/people/macro/geography/unrecognized. evaluateNudgeRule (6): no_profile, wrong_holder, conviction-at-threshold- is-NOT-eligible (strict >), no matching tag, happy match, first-match-wins for multiple candidate tags. checkCooldown (3): true on row hit, false on no row, cutoff date param verifies the 14-day boundary. evaluateAndFireNudge (4): happy fire (text contains hush command + matched tag), cooldown silent skip (no INSERT, no stderr), no_profile short-circuit, below-conviction short-circuit (no cooldown query fired). buildNudgeText (2): hush command shape, conviction value embedded. resetNudgeCooldown (2): returns count, idempotent on zero rows. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * calibration: E8 team-brain sharing + D18 cross-brain query semantics (T14) Cross-brain calibration profile resolution per the D18 4-rule contract. Pins all four cross-brain leak surfaces in dedicated unit tests so future mount features can't silently regress this security model. D18 semantics (committed): Rule 1 — LOCAL-FIRST ORDERING. Query the local brain first. If a profile exists, return it. Do NOT also query mounts (avoids stale-mount-overrides-fresh-local). Verified: mountResolver is NOT called when local has a hit. Rule 2 — MOUNT FALLBACK. Only when local has no profile AND canReadMounts=true, walk the mounts in priority order. First match wins. Each mount-side row must have published=true to be visible (D15 asymmetric opt-in). Rule 3 — CROSS-BRAIN ATTRIBUTION. Every returned profile carries source_brain_id + from_mount flag. Consumers (E1 think rewrite, E3 contradictions, E7 nudge, E6 dashboard) MUST surface this via attributionSuffix() so the user sees which brain answered. Rule 4 — SUBAGENT PROHIBITION. canReadMountsForCtx() classifier returns FALSE for subagent loops without trusted-workspace allowedSlugPrefixes. Closes the OAuth-token-to-cross-brain-leak surface — subagents see ONLY their local-brain results regardless of which holder they query. Exception: trusted cycle phases (synthesize/patterns) pass allowedSlugPrefixes set and ARE allowed to read mounts. Pinned in the classifier test. Architecture: queryAcrossBrains(localEngine, opts) — pure orchestrator. Composes getLatestProfile() from src/commands/calibration.ts. Mount engine access is via opts.mountResolver — production wires this to the v0.19+ gbrain mounts subsystem; tests inject a stub returning an ordered list of mocked engines. Decouples cross-brain LOGIC from multi-engine PLUMBING. canReadMountsForCtx(ctx) — pure classifier table. Drives the rule-4 gate. Production callers compose it from OperationContext. attributionSuffix(result) — pure formatter. Emits the "(from mounted brain: <id>)" suffix when from_mount=true; empty string when local. Mandatory for user-visible cross-brain consumers. Tests: 15 cases pinned to the 4 D18 rules + 4 supplementary structural checks. D18-1: published=false profile on mount stays hidden. D18-2/3: subagent context cannot fall back to mounts (2 cases — null on local-empty + canReadMounts=false, local hit still returned). D18-4: attribution surfaces source_brain_id (3 cases — mount answer flag, local answer flag, attributionSuffix formatter). Rule 1 local-first ordering (2 cases — mountResolver NOT called on local hit, IS called on local empty). Mount priority order (3 cases — first published=true wins, all published=false returns null, no mounts configured returns null without throwing). canReadMountsForCtx classifier (4 cases — local CLI true, MCP non-subagent true, subagent without trusted-workspace false, subagent WITH trusted-workspace true). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * admin: E6 Calibration tab + D23 server-rendered SVG + TD2 contrast bump (T15) Adds the v0.36.0.0 admin SPA Calibration tab. Per the design review, the approved variant-B (Linear calm clarity) layout: single-column flow, generous whitespace, ONE big sparkline as hero, then patterns, then domain bars, then abandoned threads. D23 server-rendered SVG architecture: src/core/calibration/svg-renderer.ts — pure functions. data → SVG string. No DOM, no React, no chart library dep. Inlines the admin design tokens (#0a0a0f bg, #3b82f6 accent, etc.) so the SVG is visually consistent with the rest of the admin SPA. Four chart renderers: - renderBrierTrend({ series }) — sparkline w/ baseline reference at 0.25 (always-50% baseline) - renderDomainBars({ bars }) — horizontal accuracy bars per domain - renderAbandonedThreadsCard(threads) — D30/TD4 'revisit now' link per row, points at /admin/calibration/revisit/<takeId> - renderPatternStatementsCard(statements) — D29/TD3 clickable drill-down links per row, point at /admin/calibration/pattern/<i> XSS posture: all caller-controlled strings pass through escapeXml(). Numeric inputs are .toFixed()-coerced. Admin SPA renders via dangerouslySetInnerHTML inside a TrustedSVG wrapper component; endpoint is gated by requireAdmin middleware. /admin/api/calibration/profile — returns the active profile row as JSON. /admin/api/calibration/charts/:type — returns image/svg+xml markup for type ∈ {brier-trend, domain-bars, pattern-statements, abandoned-threads}. Cache-Control: private, max-age=60. brier-trend currently renders a single-point series from the active profile (the time-series view across calibration_profiles.generated_at history is a v0.37 follow-up once we have multiple snapshots). abandoned-threads pulls the top 5 abandoned rows via the same SQL the doctor check uses. CalibrationPage React component (admin/src/pages/Calibration.tsx): Fetches profile + 4 charts. Loading / error / cold-brain states all handled. Layout includes the audit annotations (partial-grade badge, voice-gate-fell-back-to-template badge) per the approved mockup. TrustedSVG wrapper isolates the dangerouslySetInnerHTML to the SVG surface only. App.tsx nav: added 'calibration' page route + sidebar nav item, hash routing extended to support #calibration. TD2 contrast bump: admin/src/index.css --text-muted: #555 → #777. Old value was contrast 4.0 on the #0a0a0f bg — below WCAG AA 4.5 for body text. New value is ~5.5, passes AA. Improvement is global across Dashboard, Agents, RequestLog, and the new Calibration tab — single-line CSS change with ~10x the impact. admin/dist/ rebuilt via `bun run build` (vite). 36 modules transformed. Tests: 19 cases in test/svg-renderer.test.ts. escapeXml (1): canonical entities. renderBrierTrend (6): empty state, polyline for 2+ points, clamp beyond yMax, design tokens inlined, XSS safety on date strings, text-anchor end on right label. renderDomainBars (4): empty state, label/accuracy/n rendering, out-of-range accuracy clamp, XSS safety on labels. renderAbandonedThreadsCard (4): empty state, row rendering with revisit link, claim truncation at 70 chars, custom revisitHref override. renderPatternStatementsCard (4): empty state, anchor count matches statement count, XSS safety, custom drillHref override. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * recall: calibration footer formatter for morning pulse (T16) Pure formatter that turns a CalibrationProfileRow + optional abandoned- threads list into the conversational block the morning pulse will surface: Calibration this quarter: Brier 0.18 (solid). Right on early-stage tactics, late on macro by 18 months. Over-confident on team execution; under-calibrated on regulatory risk. Threads you opened and never came back to: · AI search platform differentiation (17 months silent) · International expansion playbook (12 months silent) Cold-brain branch: returns empty string when no profile or < 5 resolved takes. Caller decides whether to render the block; cold-brain absence is the cleanest non-event. Brier trend note maps the absolute value to conversational copy: <= 0.10 → "(strong calibration)" <= 0.20 → "(solid)" <= 0.25 → "(near baseline)" > 0.25 → "(worse than always-50% baseline — review your high-conviction calls)" v0.36.0.0 ship state has only the current profile snapshot. The "was 0.22 90d ago — improving" comparison shape arrives when we accumulate generated_at history across multiple cycles. R3 regression posture: This module is the FORMATTER only. Wiring into `gbrain recall`'s text output is intentionally NOT in this commit — runRecall's surface stays unchanged. v0.37 wires it under --show-calibration (opt-in initially, default-on later). For now the formatter is callable from the admin tab + custom CLI scripts that want it. Architecture: buildRecallCalibrationFooter(opts) — pure. opts.profile required, opts.abandonedThreads optional, opts.threadColumnWidth defaults to 50. Caps at 4 patterns + 5 abandoned threads to keep the footer scannable. Truncates long abandoned-thread claim text to fit the column width with a trailing ellipsis. Tests: 14 cases. Cold-brain branch (3): null profile, < 5 resolved, zero resolved. Happy path (7): header + Brier + patterns, trend note ranges (4 brackets), null brier omits the Brier line but keeps header, caps at 4 patterns. Abandoned threads (4): omit section when none, emit when present, cap at 5, truncate long claim with column-width override. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * calibration: --undo-wave reversal command (T17 / D18 CDX-3) Implements the undo-wave reversal flow. Every new row written by the v0.36.0.0 calibration wave carries wave_version='v0.36.0.0' so a precise revert is possible without touching pre-wave data. CLI surface (replaces the v0.36.0.0 ship-state placeholder): gbrain calibration --undo-wave v0.36.0.0 [--dry-run] [--scrub-gstack] [--json] Reversal scope (4 steps): Step 1 — UNSET takes.resolved_* columns for takes auto-applied by this wave. Identifies wave-applied takes via take_grade_cache.applied=true + wave_version match. Cross-checks resolved_by='gbrain:grade_takes' to ensure we're not un-resolving a take a manual `gbrain takes resolve` override has since claimed. Manual resolutions persist; only auto-grade resolutions revert. Step 1b — Mark take_grade_cache rows applied=false post-undo so the audit trail shows they WERE applied but this wave was reverted. The CDX-11 confidence-drift check filters on applied=true and gets a cleaner sample post-undo. Step 2 — DELETE FROM calibration_profiles WHERE wave_version = ?. Step 3 — DELETE FROM take_nudge_log WHERE wave_version = ?. Step 4 — Optional gstack-learnings-prune via the binary, scoped to the GSTACK_LEARNING_NAMESPACE prefix. Opt-in via --scrub-gstack. Best-effort: binary-missing or failure logs a warning + suggests the manual command; the rest of the undo still succeeded. Dry-run posture: --dry-run computes the counts via SELECT COUNT(*) shapes without emitting any UPDATE or DELETE. Same UndoWaveResult shape returned so operator sees exactly what would be reverted before committing. --dry-run intentionally skips the gstack scrub (filesystem write) too; ship-state safety call. Idempotency: Re-running --undo-wave on a brain that's already reverted is a no-op. Each query filters on wave_version; no matching rows → zero counts. Architecture: undoWave(engine, opts) — async, returns UndoWaveResult. Pure data layer; no stderr writes, no process exits. CLI dispatch in src/commands/calibration.ts handles printing. v0.36.0.0 ship state runs steps 1-3 sequentially (no transaction). Partial reversal is recoverable via re-run since each step is idempotent on wave_version match. A future enhancement (v0.37+) can wrap in engine.transaction once that surface lands in BrainEngine. Tests: 8 cases in test/undo-wave.test.ts. Dry-run posture (1): counts emitted, NO UPDATE/DELETE SQL fired. Happy path (3): all 4 steps execute, resolved_by filter scopes UPDATE to wave-applied resolutions, custom resolvedByLabel honored. Empty wave (2): zero counts when no matching rows, idempotent re-run. Wave-version parameter threading (2): supplied version threads through all queries, different wave versions don't collide. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * calibration: A/B harness for think + ab-report (T18 / D19 CDX-18) Structural answer to CDX-18 (anti-bias rewrite may make advice worse). We don't have to guess whether calibration helps — we measure. Architecture: runAbTrial(input) — calls thinkRunner TWICE on the same question (baseline + --with-calibration), surfaces both answers to a preferenceResolver, persists the trial to think_ab_results. buildAbReport(engine, { days }) — aggregates the table over the last N days (default 30). Computes win counts, ties, neither, and a with_calibration_win_rate over DECISIVE trials only (excludes neither/tie). Flags calibration_net_negative when n >= 20 AND win rate < 45%. formatAbReport(report, days) — pretty-prints for stdout; emits the calibration_net_negative warning block when triggered. CLI: gbrain calibration ab-report [--days N] [--json] Reads the table, prints the breakdown. Replaces the v0.36.0.0 ship-state placeholder in src/commands/calibration.ts. gbrain think --ab "<question>" Wires into runAbTrial via the dispatch in src/commands/think.ts — follow-up commit. This commit lands the harness layer + schema + report surface; the --ab flag itself flips on in a one-line wiring commit when the runRecall path is ready. Schema (migration v72 / think_ab_results): source_id, wave_version, ran_at, question, baseline_answer, with_calibration_answer, preferred (CHECK in {baseline, with_calibration, neither, tie}), model_id, notes. CHECK constraint enforces preferred enum. Default wave_version 'v0.36.0.0' stamped so --undo-wave can scrub these too. Index on (source_id, ran_at DESC) supports the report's "last N days" query. schema.sql + pglite-schema.ts both updated for fresh-install parity. schema-embedded.ts regenerated via build:schema. calibration_net_negative threshold (D19): Triggers when: - decisive_trials (baseline + with_calibration) >= 20 - with_calibration_win_rate < 0.45 (NOT <= — exact 45% is OK) Small-sample guard (n < 20) prevents the warning from firing on early data with sampling noise. Confidence-flat threshold (no Wilson CI yet) keeps the math simple; v0.37+ adds CI bounds. Tests: 12 cases in test/think-ab.test.ts. runAbTrial (4): both runner calls fire, preferenceResolver receives both answers, INSERT row params shape, throws when thinkRunner missing. buildAbReport (5): zero trials, aggregation, net_negative trigger at n>=20 + win<45%, no trigger at n<20 (small-sample guard), no trigger at exact 45% boundary. formatAbReport (3): zero-state message, decisive-trials breakdown, net_negative warning block. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * calibration: pattern drill-down route + revisit-now CLI (TD3 / D29 + TD4 / D30) TD3 (D29) — clickable pattern drill-down endpoint: GET /admin/api/calibration/pattern/:id (requireAdmin) Returns the pattern statement at index `id` plus the top 25 resolved takes for the holder, sorted by weight desc. v0.36.0.0 ship-state approximation: surfaces broad provenance evidence (top resolved takes). v0.37+ stores per-pattern source_take_ids[] on a calibration_profile_patterns join table so the drill-down shows the EXACT takes that drove the pattern. Surfaces a `provenance_note` field in the response so the operator sees the v0.36.0.0-vs-v0.37 fidelity boundary inline. The admin SPA's renderPatternStatementsCard SVG already emits anchor tags pointing at /admin/calibration/pattern/<i> (T15 ship state). This route makes those anchors clickable — closes the trust loop that was the rationale for D29 ("pattern statements without their evidence are dressed-up LLM hallucinations"). TD4 (D30) — `gbrain takes revisit <slug>` editor-open action: Adds the `revisit` subcommand to gbrain takes. Opens $EDITOR (falling back to vi) on the source markdown file for the slug. Appends a `<!-- gbrain:revisit -->` cursor marker at the bottom of the page on first invocation so the editor opens with intent visible. Reads sync.repo_path from config to locate the brain repo. Refuses to proceed with a clear error when the repo isn't configured or the page doesn't exist. spawnSync with stdio:'inherit' so the editor takes the terminal. Exit status surfaced on failure. The SVG renderer's revisit-now anchor for each abandoned thread row emits /admin/calibration/revisit/<takeId>. A small route handler that resolves take_id → page_slug then dispatches `gbrain takes revisit` via spawn is a v0.37 follow-up — the CLI command exists now so developers can wire it directly. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: DESIGN.md — formalize de facto design tokens (TD1) Promotes the admin SPA's de facto design tokens (landed v0.26.0) to a canonical DESIGN.md at the repo root. This is the calibration target for /plan-design-review and /design-review going forward — when a question is "does this UI fit the system?", the answer is here. Captures the system as it stands today: Voice (5 surfaces, all routed through gateVoice() with mode-specific rubrics): pattern_statement, nudge, forecast_blurb, dashboard_caption, morning_pulse. Friend-not-doctor; concrete data over abstract metrics; no preachy / clinical / corporate language. Color tokens: 10 CSS variables from admin/src/index.css inlined into the SVG renderer (src/core/calibration/svg-renderer.ts). Dark theme is the only theme — admin is an operator tool. WCAG contrast documented per token; TD2's #555 → #777 bump on --text-muted noted. Typography: Inter for UI, JetBrains Mono for numbers/slugs/data. Type scale (18 / 14 / 13 / 12 / 11) documented as de facto, not yet formalized. Spacing scale: 4 / 8 / 16 / 24 / 32px. Linear-app density. Layout: sidebar 200px, max content 720px (text) / 960px (tables). No 3-column feature grids, no icons in colored circles, no decorative blobs. Charts: server-rendered SVG via pure functions in src/core/calibration/svg-renderer.ts. XSS posture documented: server-side escapeXml on caller-controlled strings, numeric inputs .toFixed()-coerced, admin SPA renders via <TrustedSVG> wrapper. Interaction patterns: keyboard nav required (J/K/space/u/q on the propose-queue), loading/empty/error states ARE features. v0.37+ roadmap: type scale formalization, animation tokens, component library extraction. Light mode explicitly NOT planned. The doc is a living target, not a frozen spec. Major changes route through /plan-design-review per the existing review chain. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * calibration: synthetic corpus scaffold + privacy CI guard (T19 + T20) T19 — synthetic corpus scaffold for extract-takes prompt tuning. test/fixtures/calibration/extract-takes-corpus/ — 5 representative pages across 4 genres (essay, people, companies, meetings, decisions). v0.36.0.0 ships a SMALL representative corpus as proof of structure; the full 50-page training set + 10-page holdout gets generated by the operator via `gbrain calibration build-corpus` (v0.37 follow-up subcommand) or by hand with the privacy guard catching violations either way. Privacy contract per D13': every page is SYNTHETIC. None of the names/companies/funds/deals/events refer to anything real. Placeholder names per CLAUDE.md: alice-example, charlie-example, acme-example, widget-co, fund-a/b/c, acme-seed, widget-series-a, meetings/2026-04-03. test/fixtures/calibration/README.md spells out the privacy contract, generation flow, and what the corpus is (stable regression set for the extract-takes prompt) vs is not (real anything). T20 — privacy CI guard (CDX-14 mitigation). scripts/check-synthetic-corpus-privacy.sh greps the corpus for: 1. Explicit dollar amounts ($50M, $1.2B etc) — would suggest the page memorized a real round size. 2. Out-of-range year references (informational only for v0.36.0.0; deferred to a manual review checklist). 3. Pages that reference ZERO placeholder names — suggests the page might be referring to real entities. Essay-genre fixtures exempt (they're anonymized PG-style writing by design). Wired into `bun run verify` (CI gate) so contributors can't accidentally land a synthetic fixture that leaks real-world specificity. The intent is fail-fast on accidental leakage; the operator can update the allowlist if a generic dollar amount is intentional. Closes CDX-14: 'CC reads real brain pages locally, writes nothing still risks privacy if any generated synthetic fixture memorizes structure-specific facts. Placeholder names are not enough.' The corpus shipped here is intentionally small but covers the four core gbrain page genres (essay, people, companies, meetings/decisions). The v0.37 corpus-build subcommand will fan out to 50 with the operator spot-checking + the CI guard enforcing the privacy contract. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test: R1-R5 IRON RULE regression inventory (T21) Per /plan-eng-review D26 IRON RULE: regressions get added to the test suite as critical requirements, no AskUserQuestion needed. Pins five regressions identified during the v0.36.0.0 wave's coverage diagram: R1: think baseline UNCHANGED when --with-calibration absent. Covered structurally by test/think-with-calibration.test.ts plus assertion-pinned in this file (default user message: question first, then retrieval; system prompt: no anti-bias section). R2: contradictions probe output UNCHANGED when no calibration profile. Covered structurally by test/eval-contradictions-calibration-join.test.ts plus pinned here (null profile → null tag, byte-identical to v0.32.6). R3: takes resolution flow works when grade_takes phase disabled. Pinned import-surface coupling: takes-resolution.ts has zero dependency on grade_takes module. If a future refactor accidentally couples them, this test fails to compile. R4: search/list_pages/get_page work identically through new source_id paths. Marker test referencing existing v0.34.1 source-isolation suite at test/source-isolation-pglite.test.ts. v0.36.0.0 does NOT modify those code paths; the existing tests catch any accidental coupling. R5: existing search modes (conservative/balanced/tokenmax) unaffected. Marker test referencing existing test/search-mode.test.ts. The calibration code DOES NOT IMPORT from src/core/search/mode.ts. Plus an inventory test that confirms all 5 regressions have an 'addressed' status — fail-loud if a future contributor removes a guard without updating the inventory. 7 tests total. Pure functions, no engine, hermetic. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: v0.36.0.0 CHANGELOG + CLAUDE.md anchors + calibration convention skill CHANGELOG entry: the user-facing release notes. Leads with the headline ("the brain learns how you tend to be wrong, then argues against your blind spots on every advice call"), 5 'what you can now do' bullets in GStack voice, itemized changes by lane, and the 'To take advantage of v0.36.0.0' upgrade checklist per the CLAUDE.md required-block contract. CLAUDE.md anchors: new 'v0.36.0.0 Hindsight calibration wave (key files cluster)' block inserted before the v0.31.1 thin-client section. 23 new files / extensions annotated with one-paragraph descriptions each, linking back to the convention skill at skills/conventions/calibration.md for the agent-facing rules. skills/conventions/calibration.md: the agent-facing convention skill. Tells future contributors which calibration touchpoint applies to their task — voice gate? BaseCyclePhase? source-scope thread? doctor warning? cross-brain query rules? auto-resolve threshold posture? Test seam patterns. Bug class to avoid (the v0.34.1 source-isolation leak shape). Version trio (per CLAUDE.md mandatory audit): VERSION: 0.36.0.0 package.json: 0.36.0.0 CHANGELOG: ## [0.36.0.0] - 2026-05-17 llms.txt + llms-full.txt regenerated via `bun run build:llms` after the CLAUDE.md edit (per the explicit CLAUDE.md mandate "Any CLAUDE.md edit MUST be followed by `bun run build:llms`"). The `test/build-llms.test.ts` guard runs in CI shard 1; the committed bundles are checked against fresh generator output. bun run verify is clean. typecheck clean. Privacy CI guard passes (0 violations across 6 corpus pages). All ready for /ship. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * cycle: wire propose_takes / grade_takes / calibration_profile into runCycle (T-fix) The three new v0.36.0.0 phases were declared in CyclePhase / ALL_PHASES / NEEDS_LOCK_PHASES but the runCycle orchestrator never dispatched them. ALL_PHASES advertised them, gbrain dream --phase propose_takes accepted them, but `gbrain dream` (default) silently skipped all three. Adds a single dispatch block between consolidate and embed that: - builds an OperationContext on the fly (trusted-workspace caller, remote: false, sourceId resolved via the same helper sync uses) - dispatches the three phases in the order ALL_PHASES declares - records the same skipped-phase shape (no_database) when engine is null Pinned by test/core/cycle.serial.test.ts "default: all 6 phases run in order" which was already failing against ALL_PHASES (the test name lags the actual phase count; left as-is since renaming churns history). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * calibration: expand synthetic corpus + add hand-labeled ground-truth (T19) Adds 8 new synthetic pages modeled on the genre mix observed in the real brain (concepts-with-timeline, meeting-notes, daily-journal, people-pages, essays). Companion .gradeable-claims.json files carry hand-labeled answer keys — what a tuned propose_takes prompt SHOULD extract per page. Closes the F1 gate gap from the plan's T19/D19: Training corpus (test/fixtures/calibration/extract-takes-corpus/): + concept-startup-market-dynamics.md (10 claims) + meeting-2026-04-10-fundraise-fund-a.md (6 claims) + daily-2026-04-15.md (5 claims) Blind holdout (test/fixtures/calibration/holdout/): + concept-founder-execution.md (6 claims, F1 >= 0.80) + daily-2026-04-18.md (4 claims, F1 >= 0.80) + meeting-2026-04-17-hiring-charlie.md (5 claims, F1 >= 0.80) + essay-on-conviction.md (7 claims, F1 >= 0.80) + people-bob-example.md (5 claims, F1 >= 0.80) Privacy: - No real-brain content read into any committed artifact. Pages written from scratch using the canonical placeholder set (alice-example, charlie-example, bob-example, acme-example, widget-co, fund-a/b/c). Real-name grep confirms zero leakage: wintermute, garrytan, paul-graham, sam-altman, etc. → 0 hits. - scripts/check-synthetic-corpus-privacy.sh passes: 0 violations across 14 pages (was 6). Genre fidelity: - concept-with-timeline pages mirror the dated-assertion structure real brain uses (verb framing varies: "argues / predicts / I think / I bet / strong conviction / moderate conviction"). - meeting-notes pages carry both prose claims (extracted via hedging language) and explicit ## Takes sections. - daily-journal pages test probabilistic framing ("75/25 in favor", "call it ~0.5") and self-tagged conviction values. - essay-on-conviction is the meta-page that names the author's own bias patterns — primary signal for calibration_profile. - people pages test claim-about-third-party extraction. Each JSON ground-truth lists per-claim: - claim_text + kind (prediction|judgment|bet) + domain - conviction (0..1) - since_date - rationale (why this claim is gradeable + how a tuned prompt should infer conviction from the prose) This is the corpus that gates the T19 prompt-tune iteration: - F1 >= 0.85 on training (10+6+5 = 21 claims across 3 pages plus the existing 5 fixtures already shipped) - F1 >= 0.80 on holdout (27 claims across 5 pages) Plan reference: ~/.claude/plans/system-instruction-you-are-working-rippling-knuth.md Privacy gate: scripts/check-synthetic-corpus-privacy.sh (wired into bun run verify). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * calibration: tune propose_takes prompt against synthetic corpus (cat15 F1 0.92+) The v0.36.1.0 ship state shipped propose_takes with a stub prompt that the docs flagged as "tune via T19 corpus build before relying on propose_takes in production." T19's corpus was built in commit |
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03947665e4 |
v0.36.0.0 feat(skillpack): scaffold + reference + harvest (retire managed-block install) (#1130)
* feat(skillpack): extract copyArtifacts shared helper (T1)
Pure file-copy primitive for scaffold (gbrain→host) and harvest (host→gbrain).
Atomic-refusal contract: symlink-reject + canonical-path containment validate
every item before any write. Used by both directions of the v0.33 loop.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* feat(skillpack): scaffold subcommand + SKILL.md frontmatter sources (T2)
New scaffold.ts replaces the managed-block installer. One-time additive copy
into the user's repo via copyArtifacts; refuses to overwrite existing files
(user owns them). Partial-state policy: copies missing paired sources even
when the skill dir already exists.
bundle.ts extended with loadSkillSources + enumerateScaffoldEntries — paired
source files declared in each SKILL.md's frontmatter sources: array, not in
openclaw.plugin.json. Single source of truth, co-located with the skill.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* feat(skillpack): reference command + apply-clean-hunks (T4 + T15)
reference is the read-only diff lens with an agent-readable framing line. Pure-JS
unified-diff producer + parser + applier (no patch(1) dependency). Two-way merge
with documented limitation: without scaffold-time base tracking, applied hunks
align everything to gbrain. The agent dry-runs reference first, then decides.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* feat(skillpack): migrate-fence + scrub-legacy-fence-rows (T5 + T16)
migrate-fence is the one-shot transition from the pre-v0.36 managed-block model.
Strips begin/end markers and the cumulative-slugs receipt comment; preserves
fence rows verbatim as user-owned routing during the transition to frontmatter
discovery. Receipt-then-row fallback (F-CDX-8) covers stale/missing receipts.
scrub-legacy-fence-rows is the opt-in cleanup after migrate-fence. Two-condition
gate: removes a row only when skills/<slug>/ exists AND that skill's frontmatter
declares non-empty triggers (proof frontmatter discovery covers it).
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* feat(skillpack): harvest + privacy linter (T6 + T7)
The inverse loop: lift a proven skill from a host repo (~/git/wintermute, etc.)
back into gbrain so other clients can scaffold it. --from <host-repo-root> is
symmetric with scaffold's --workspace.
Security: symlink rejection + canonical-path containment (mirrors validateUploadPath).
Privacy: default-on linter scans harvested files against ~/.gbrain/harvest-private-patterns.txt
plus built-in defaults (Wintermute, email, Slack channel patterns). Any match
rolls back the copy and exits non-zero. --no-lint bypasses for the editorial
workflow after a manual scrub.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* feat(repo-root): cwd_walk_up tier for non-OpenClaw hosts (T9 + D3)
autoDetectSkillsDir now walks up from cwd looking for any skills/ directory,
ahead of the implicit ~/.openclaw/workspace fallback. cd ~/git/wintermute &&
gbrain skillpack scaffold ... finds wintermute automatically without requiring
a RESOLVER.md/AGENTS.md to exist yet.
R5 regression preserved: $OPENCLAW_WORKSPACE still wins when explicitly set.
+5 test cases in test/repo-root.test.ts pin the new tier order and the R5 guard.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* feat(skillpack): rewrite CLI dispatch, drop install + uninstall (T3 + T10)
skillpack.ts dispatcher rewritten for the v0.36 contract: scaffold, reference
(+ --apply-clean-hunks), migrate-fence, scrub-legacy-fence-rows, harvest, plus
the existing list / diff / check.
install and uninstall are gone — both exit non-zero with a hint pointing at
scaffold / migrate-fence. Clean break, no deprecated alias.
skillpack-check gains --strict for CI gating. When invoked as the subcommand
`gbrain skillpack check`, default is informational (exit 0 even with drift);
--strict opts back into the cron-friendly exit-1-on-issues behavior. Top-level
gbrain skillpack-check preserves its existing exit semantics for backwards compat.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* feat(skills): skillpack-harvest editorial workflow + resolver wiring (T8)
The companion editorial skill for the gbrain skillpack harvest CLI. Walks the
genericization checklist (scrub fork names, generalize triggers, lift fork-
specific conventions to references) before the CLI runs. Routing-eval fixtures
use paraphrased intents to avoid the intent_copies_trigger lint.
Wires the new slug into openclaw.plugin.json#skills, skills/manifest.json, and
skills/RESOLVER.md.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* test(skillpack): 9-case real-subprocess E2E flow (T11)
Spawns gbrain as a subprocess against tempdir workspaces. Covers: scaffold
first-run + re-run no-op, reference diff + --apply-clean-hunks, migrate-fence,
scrub-legacy-fence-rows, harvest privacy-lint catch + --no-lint bypass, and
the install removed-error path. No DATABASE_URL needed — skillpack is
filesystem-only.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* chore: docs + VERSION + CHANGELOG for v0.36.0.0 (T13 + T14)
Skillpacks as scaffolding, not amber.
v0.36 retires the managed-block install model. Six new subcommands replace
install + uninstall: scaffold, reference (with --apply-clean-hunks), migrate-fence,
scrub-legacy-fence-rows, harvest, plus the existing list / diff / check
(check gains --strict for CI gating). Routing comes from each skill's
frontmatter triggers — gbrain does not touch your RESOLVER.md or AGENTS.md.
Companion editorial skill skillpack-harvest drives the genericization
checklist; default-on privacy linter catches Wintermute / email / Slack
references before they leak into gbrain core.
New docs guide at docs/guides/skillpacks-as-scaffolding.md walks the model
and the migration path for pre-v0.36 installs.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* fix(ci): privacy checks — allow-list harvest-lint tests, scrub user-facing fork-name references
CI's check-privacy.sh and check-test-real-names.sh both flagged the literal
fork name across the v0.36 skillpack diff. Two failure modes, two fixes:
1. **Meta-rule-enforcement files** added to both allow-lists. The harvest
privacy linter's whole job is to catch the banned literal leaking into
gbrain; its source has the regex pattern, its tests verify the linter
fires by feeding it the banned string, and the skill markdown documents
the substitution policy. Same exception status as check-privacy.sh and
check-proposal-pii.sh themselves. Files allow-listed:
- src/core/skillpack/harvest-lint.ts
- test/skillpack-harvest-lint.test.ts
- test/skillpack-harvest.test.ts
- test/e2e/skillpack-flow.test.ts
- skills/skillpack-harvest/SKILL.md
2. **User-facing references** swapped for canonical phrasing per CLAUDE.md's
responsible-disclosure rule. README + new docs guide + 4 src docstrings
+ 1 test now say 'your OpenClaw' / 'host agent repo' / 'agentRepo' var
name. Behavior unchanged — only documentation strings touched.
Verify gate (the script CI runs) passes locally: EXIT=0.
Tests still pass: 60/60 across the affected files.
llms-full.txt regenerated.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* fix(test): update check-resolvable-cli expectation for cwd_walk_up tier
Sister fix to the test/repo-root.test.ts update in commit
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1dadd9ed71 |
v0.35.7.0 feat: temporal trajectory + founder scorecard (Phases 2-4) (#1131)
* feat(facts): typed-claim substrate + cycle correctness fixes (v0.35.6 wave 1/3) Schema (migration v67): - Add four optional typed-claim columns to facts: claim_metric TEXT, claim_value DOUBLE PRECISION, claim_unit TEXT, claim_period TEXT - Partial index facts_typed_claim_idx ON (entity_slug, claim_metric, valid_from) WHERE claim_metric IS NOT NULL - All nullable, metadata-only on both engines Fence layer: - ParsedFact (facts-fence.ts) gains optional claimMetric/Value/Unit/Period - Parser tolerates both 10-cell (legacy) and 14-cell (widened) rows - Renderer emits 14 cells iff any row has typed data; otherwise stays 10-cell so existing fences don't widen on unrelated edits - Numeric value cell tolerates comma thousand separators (50,000 -> 50000) Extract pipeline (D-CDX-2, D-ENG-1): - src/core/facts/extract.ts (the actual Haiku call site, NOT extract-facts.ts cycle phase) extends its system prompt to emit typed fields for metric-shaped claims - extractFactsFromFenceText gains optional pageEffectiveDate. Precedence: fence-row validFrom > pageEffectiveDate > undefined (engine defaults to now) - normalizeMetricLabel: 15-entry seed map for common founder metrics (mrr, arr, runway, headcount, team_size, cac, ltv, gross_margin, burn_rate, cash, users, mau, dau, churn_rate, revenue); unknown labels lowercase + space->_ Engine extensions: - NewFact + insertFact + insertFacts in both engines accept the four typed columns (all nullable) - Cycle phase extract-facts.ts threads page.effective_date through AND batch-embeds via gateway.embed() before insertFacts (D-CDX-3 fix for cycle-inserted facts arriving with embedding=NULL) Consolidate fix (D-CDX-4 — Codex F4): - Replace MAX(row_num)+1 INSERT with semantic upsert on (page_id, claim, since_date). Re-running the full cycle on stable input produces zero new takes — fixes the pre-existing duplicate-takes bug after extract_facts wipes consolidated_at - Chronological valid_until writeback per cluster: sort by (valid_from ASC, id ASC), walk pairs, set older.valid_until = newer.valid_from Tests: - test/migrate.test.ts +6 cases for v67 shape + materialization + nullable backward compat - test/facts-fence-typed.test.ts (new, 17 cases): parser+renderer round-trip, normalization seed map coverage, valid_from precedence three-branch - test/consolidate-valid-until.test.ts (new, 4 cases): chronological writeback (R4a), same-day id tiebreaker, cycle re-run zero duplicates (R4b/R7), valid_until idempotency - test/schema-bootstrap-coverage.test.ts: add four typed-claim columns to COLUMN_EXEMPTIONS (migration co-defines the partial index, no forward reference to bootstrap) Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(trajectory): find_trajectory MCP op + eval/founder CLIs (v0.35.6 wave 2/3) Engine method (D-CDX-1, D-CDX-6): - BrainEngine.findTrajectory(opts) on both Postgres and PGLite - TrajectoryOpts: scalar sourceId fast path + sourceIds federated array (mirrors v0.34.1.0 search* dual pattern) - opts.remote: when true, SQL adds AND visibility='world' so OAuth read clients see only world-visibility facts (mirrors recall's posture — closes the F7 privacy regression Codex caught in plan review) - Single SQL query, ORDER BY valid_from ASC, id ASC for deterministic output (R3 pin). Returns TrajectoryPoint[] including raw embedding so the caller can compute drift without a second round-trip Pure function library (src/core/trajectory.ts, new): - detectRegressions(points, threshold): walks consecutive (metric, value) pairs per metric; emits when newer drops >= threshold below older. 10% default, override via GBRAIN_TRAJECTORY_REGRESSION_THRESHOLD - computeDriftScore(points): 1 - mean(cosine(emb[i], emb[i-1])) over embedded points; clamped [0,1]; null when <3 embedded points (D-ENG-3 graceful degradation) - computeTrajectoryStats(points): composed shape returning both - TRAJECTORY_SCHEMA_VERSION = 1 — additive-only across releases (R5) MCP op (src/core/operations.ts): - find_trajectory: scope read, NOT localOnly. Routes through sourceScopeOpts(ctx) for federated isolation AND threads ctx.remote for visibility filtering. Strips raw Float32Array embeddings from the wire shape; converts valid_from to YYYY-MM-DD string - Registered in operations array after find_experts - FIND_TRAJECTORY_DESCRIPTION in operations-descriptions.ts CLIs: - gbrain eval trajectory <entity> [--metric M] [--since D] [--until D] [--limit N] [--json] — chronological human view with [REGRESSION] inline annotation; thin-client routing via callRemoteTool(find_trajectory). Dispatched in src/commands/eval.ts sub-subcommand block - gbrain founder scorecard <entity> [--since D] [--until D] [--json] — pure aggregation over Phase 2's substrate. Four signals: claim_accuracy (over resolved takes), consistency, growth_trajectory, red_flags. computeFounderScorecard exported for tests. Registered as top-level command in cli.ts; added to CLI_ONLY set Tests (45 cases across 5 files): - test/engine-find-trajectory.test.ts: 18 cases — chronological order, source scoping (scalar + federated), visibility filter on remote=true, metric + since/until filters, regression detection at threshold boundaries, drift score with various embedding states - test/operations-find-trajectory.test.ts: 9 cases — op registration, param validation, JSON envelope shape, R5 schema_version: 1, embedding stripped from wire, R6 visibility filter, source scoping - test/eval-trajectory.test.ts: 7 cases — arg parsing, --help, --json envelope, regression annotation, --metric filter, empty entity - test/founder-scorecard.test.ts: 9 cases — empty inputs no-NaN (G2), claim_accuracy math, consistency math, growth_trajectory math, red_flags fire for regression / narrative_drift / missed_prediction - test/eval-contradictions/no-valid-until-write.test.ts: 4 cases — R1 (probe never writes valid_until under eval-contradictions/) + R8 (only allow-listed files write valid_until anywhere in src/) Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: v0.35.6.0 — CHANGELOG + VERSION + docs + migration note Bumps to v0.35.6.0 (next-minor after master's v0.35.5.1 — typed-claim substrate + trajectory + founder scorecard is a new user-facing feature surface, not a fix). - VERSION + package.json synced - CHANGELOG.md release-summary block in the wave-style voice, lead with what the user can now DO. Sections: typed metric claims in the fence, chronological metric trajectories, founder scorecard, MCP find_trajectory op, cycle re-run idempotency fix, embedding-on-insert fix, valid_from precedence fix. To-take-advantage-of block with verification + opt-in fence syntax example - CLAUDE.md Key Files entry consolidating the wave across eval-trajectory.ts + founder-scorecard.ts + trajectory.ts. Names every D-ENG / D-CDX decision and the Codex outside-voice F-numbers - skills/migrations/v0.35.6.md agent-readable migration note. Includes fence-syntax example for typed-claim rows so downstream agents start emitting them. Iron-rule contracts called out (R1 + R8 + R7 + visibility) - llms-full.txt regenerated to reflect the new CLAUDE.md entry Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: post-ship sync for v0.35.7.0 — trajectory + founder scorecard - README.md: add `gbrain eval trajectory` to EVAL section, add new TEMPORAL block covering `gbrain founder scorecard` + the GBRAIN_TRAJECTORY_REGRESSION_THRESHOLD env override; add v0.35.7 "What's new" paragraph below the v0.28.8 LongMemEval blurb - AGENTS.md: new bullet under Common tasks teaching agents to reach for `gbrain eval trajectory` / `gbrain founder scorecard` / the `find_trajectory` MCP op when asked to evaluate a founder/company over time - docs/contradictions.md: append "Temporal axis follow-on (v0.35.3.1 + v0.35.7)" subsection under See also, cross-linking the trajectory substrate and naming the auto-supersession.ts:4 invariant preserved by both the verdict enum (probe side) and consolidate's valid_until writeback (cycle side) - CLAUDE.md: fix stale (v0.35.4) tag on the trajectory entry to (v0.35.7) — version got rebumped twice during the merge wave - skills/migrations/v0.35.7.md renamed to v0.35.7.0.md for consistency with the v0.35.0.0.md / v0.14.0.md / etc naming convention - llms-full.txt regenerated to reflect the CLAUDE.md edit Coverage map (Diataxis): /eval trajectory CLI ✅ ref (README, AGENTS) ✅ how-to (CHANGELOG) ❌ tutorial /founder scorecard CLI ✅ ref (README, AGENTS) ✅ how-to (CHANGELOG) ❌ tutorial find_trajectory MCP op ✅ ref (CLAUDE.md, AGENTS, contradictions.md) typed-claim fence cols ✅ ref (skills/migrations/v0.35.7.0.md, CHANGELOG) Migration v67 ✅ ref (CLAUDE.md, CHANGELOG) No tutorial / explanation gaps worth filling in this PR — the migration note's fence-syntax example already covers the "first typed claim" walkthrough. ARCHITECTURE diagrams not drifted (the trajectory work extends existing facts/takes infrastructure; no new component boxes). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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488e4824e8 |
v0.34.1.0 fix(mcp): MCP fix wave — source-isolation P0 + PKCE DCR + federated_read + 3 more (#996)
* fix(mcp): skip stdin EOF handlers when MCP_STDIO=1 OpenClaw's bundle-mcp gateway and similar wrappers pipe the JSON-RPC handshake on stdin then close their stdin half. Pre-fix, both stdin 'end' and 'close' listeners (server.ts:65-66 and serve.ts:204-206) treated this as a permanent disconnect and shut the server down before the first tool call arrived. Guard both sites with `process.env.MCP_STDIO !== '1'`. Signal handlers (SIGTERM/SIGINT/SIGHUP), transport.onclose, and the parent-process watchdog still cover legitimate shutdown paths. The serve.ts site threads the env read through an injectable `mcpStdio?: boolean` on ServeOptions so tests stay isolated (no process.env mutation per scripts/check-test-isolation.sh R1). Tests: 3 new cases in test/serve-stdio-lifecycle.test.ts pin the guard's invariants — mcpStdio=true must NOT trigger shutdown on stdin EOF, signals must still drive shutdown with mcpStdio=true, and mcpStdio=false (default) preserves existing CLI behavior. 25/25 pass. Origin: PR #870. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix(oauth): honor token_endpoint_auth_method=none for PKCE public clients RFC 7591 §3.2.1: when a DCR client declares token_endpoint_auth_method="none" (PKCE-only public clients like Claude Code, Cursor), the authorization server MUST NOT issue a client_secret. Pre-fix, registerClient unconditionally minted a secret, and the MCP SDK's clientAuth middleware then rejected valid public-client flows on /token because it expected client.client_secret to match. Three changes to src/core/oauth-provider.ts:registerClient: - Gate clientSecret generation on isPublicClient = (auth_method === 'none'). Public clients store client_secret_hash = NULL. - Omit client_secret from the response payload for public clients. Confidential clients (default client_secret_post and explicit client_secret_basic) keep their existing one-time-reveal shape. - Normalize NULL secret_hash to JS undefined in getClient so SDK middleware (which checks client.client_secret === undefined, not === null) correctly identifies public clients and skips the secret-comparison branch on /token. Schema is already permissive (client_secret_hash TEXT, no NOT NULL on both src/schema.sql and src/core/pglite-schema.ts) — no migration needed. Tests: 5 new cases in test/oauth.test.ts pin: - public client → no client_secret in response (#11 from plan) - default auth_method → secret unchanged (regression guard) - explicit client_secret_post → secret unchanged - getClient NULL→undefined normalization - PKCE full /authorize → /token end-to-end with no secret (#15 from plan) 69/69 oauth.test.ts cases pass. typecheck clean. Origin: PR #909. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(serve-http): --bind HOST, default to loopback (127.0.0.1) Adds `gbrain serve --http --bind <interface>` to control which network interface the HTTP MCP server listens on. Default flipped from `0.0.0.0` (pre-v0.34) to `127.0.0.1` (v0.34.0+). Why the flip: gbrain's primary use case is a personal-knowledge brain on a laptop. The previous default exposed brains on every interface — one accidental `--http` invocation away from publishing the brain to a LAN. Server operators who need remote access pass `--bind 0.0.0.0` (or a specific interface). Codex's outside-voice on the original PR #864 correctly flagged that the additive flag wasn't actually the fix; the default needed to change for the safety claim to hold. If `--public-url` is set but `--bind` is unset, runServeHttp prints a loud stderr WARN at startup recommending `--bind 0.0.0.0`. Declaring a public URL while quietly binding loopback is almost always a misconfiguration; we want the operator to see it on first start, not silently fail remote requests. Startup banner now includes a `Bind:` row so the listening interface is visible alongside Port / Engine / Issuer. Origin: PR #864, extended with D11 (default flip) per /plan-eng-review codex outside-voice review. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix(mcp): seal source-isolation leak on read path (P0) Pre-fix, an authenticated OAuth MCP client scoped to source-A could enumerate source-B pages via six read-side ops: search, query (text AND image paths), list_pages, traverse_graph, and find_experts. The v0.31.8 source-scoping pattern shipped through dispatch.ts but the op handlers never threaded ctx.sourceId into their engine calls, and hybridSearch.ts:223's explicit SearchOpts rebuild dropped sourceId even when callers passed it. Sealing the leak: - src/core/operations.ts adds sourceScopeOpts(ctx), the canonical precedence ladder: ctx.auth.allowedSources (federated) wins over ctx.sourceId (scalar) wins over nothing. Threaded into all 5 read-side op handlers + the query-image-path searchVector call (the 6th leak surface codex caught in plan review). - src/core/search/hybrid.ts:223 now threads sourceId + sourceIds fields through the inner SearchOpts rebuild. The explicit pick shape is preserved (HNSW inner-CTE ordering depends on it) but extended. - src/core/types.ts adds sourceIds?: string[] to SearchOpts + PageFilters (D9: federated read needs array-shaped engine filter or fan-out; array wins for hot retrieval). - src/core/operations.ts AuthInfo gains sourceId + allowedSources (D2: identity surface symmetric with the federated_read column #876 will add). - Both engines now apply WHERE source_id = $N (scalar) or = ANY($N::text[]) (array) at the SQL layer for searchKeyword, searchKeywordChunks, searchVector, listPages, traverseGraph, traversePaths. Array form wins when both are set. The searchVector filter pushes into the inner HNSW CTE (codex flagged this placement during plan review). - traverseGraph + traversePaths signatures gain opts.sourceId + opts.sourceIds; engine.ts interface updated. - findExperts (the whoknows op, D3 5th leak surface) accepts sourceId + sourceIds and threads them into its internal hybridSearch call. PR #861 was authored before v0.33 shipped so this op wasn't covered in the original PR. Auth wiring: - GBrainOAuthProvider.verifyAccessToken populates AuthInfo.sourceId from oauth_clients.source_id. JOIN guarded by isUndefinedColumnError so pre-v55 brains degrade to legacy projection rather than refusing every token verification. - GBrainOAuthProvider.registerClientManual gains a sourceId parameter (defaults to 'default'). DCR registerClient also sets source_id='default' on the inserted row. - serve-http.ts:929 cleanup: AuthInfo.sourceId is now a real typed field. The cast + GBRAIN_SOURCE env fallback chain is gone (D13). Legacy bearer tokens default to 'default' source in verifyAccessToken. - http-transport.ts (legacy access_tokens path) threads sourceId='default' through DispatchOpts so v0.22.7 callers stay source-scoped. - auth.ts CLI adds --source flag to gbrain auth register-client. Migration v55 (D10 + D13): - ALTER TABLE oauth_clients ADD COLUMN source_id TEXT (nullable). - Backfill UPDATE source_id = 'default' WHERE source_id IS NULL — preserves v0.33 effective behavior verbatim for legacy clients. - ADD CONSTRAINT FK ... REFERENCES sources(id) ON DELETE SET NULL, wrapped in DO block so re-runs against fresh-install brains (where the FK already lives inline in SCHEMA_SQL) no-op cleanly. - CREATE INDEX idx_oauth_clients_source_id WHERE source_id IS NOT NULL for the verifyAccessToken JOIN. - GBRAIN_ACCEPT_SILENT_WIDEN env-flag wired through the runner via SET LOCAL gbrain.accept_silent_widen — reserved for future migrations that hit the silent-widen footgun codex flagged. This migration doesn't need it (column is brand new; no pre-existing stale values possible by definition). - src/core/pglite-schema.ts + src/schema.sql include the column + FK + index inline for fresh installs. Tests: new test/e2e/source-isolation-pglite.test.ts with 13 regression cases — one per leak surface (search/list_pages/traverse/etc.) plus explicit AuthInfo.sourceId and AuthInfo.allowedSources op-handler threading checks. Full unit suite: 6034 pass / 0 fail. PGLite initSchema time dropped from 2.4s to 850ms after consolidating v55's DO blocks (multiple DO blocks were slow on PGLite; one DO block for the FK install only is fine). Origin: PR #861 + plan-eng-review decisions D2/D3/D4/D9/D10/D13 + F2. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(gateway): multimodal embedding for openai-compatible providers Pre-fix, embedMultimodal hardcoded a recipe.id === 'voyage' branch and threw AIConfigError for every other recipe. Multimodal-capable providers fronted by LiteLLM (or any openai-compatible proxy) were unreachable even when the operator had wired up the model. The fix: - src/core/ai/gateway.ts adds embedMultimodalOpenAICompat() that POSTs to the standard /embeddings endpoint with content arrays carrying image_url entries. Routing comes from the existing recipe.implementation switch — Voyage stays on its own /multimodalembeddings path; every other openai-compatible recipe flows through the new helper. - src/core/ai/recipes/litellm-proxy.ts declares supports_multimodal: true so embedMultimodal accepts the recipe. No multimodal_models allow-list: LiteLLM is a passthrough proxy and the user owns model-id selection; provider rejection (400 from upstream) is the right enforcement layer there. Voyage's static allow-list shape stays unchanged (its 12 models share supports_multimodal but only one is multimodal-capable). - D12 runtime dimension validation: the new helper checks the returned vector length against the recipe's declared default_dims (preferred) or the brain's embedding_dimensions config. Mismatch throws AIConfigError with model id + observed + expected so the operator can swap models or rebuild the column. Pre-fix, a wrong-dim response would surface as a cryptic pgvector "vector dimension mismatch" at INSERT time. - Auth resolution routes through the existing defaultResolveAuth helper so optional-auth recipes (LiteLLM proxy with no LITELLM_API_KEY) and required-auth recipes both share one code path. Optional-auth sends "Authorization: Bearer unauthenticated" which servers like Ollama / llama-server ignore but the SDK contract requires. Tests: 11 new cases in test/openai-compat-multimodal.test.ts cover happy-path, multi-input batching, unauthenticated proxy, D12 dim mismatch + default-dim fallback, 401 / 400 / malformed-JSON / non-array error paths, and an explicit Voyage-regression test pinning that the new openai-compat route doesn't accidentally hijack the Voyage path. All 41 multimodal-related tests pass (existing voyage suite + new). typecheck clean. Origin: PR #875 + plan-eng-review D12 (runtime dim validation). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(oauth): federated_read read scope (#876) Pre-fix, OAuth clients had a single source-scope axis (source_id, added in v55). A client could either write+read one source OR be a super-reader across all sources (via NULL source_id). There was no middle ground — WeCare-style L3 dept clients that need to write to dept-x but read dept-x + parent canon + shared canon had no expression. #876 adds federated_read TEXT[] as an orthogonal read-scope axis. source_id is the WRITE authority; federated_read is the READ authority. They default to matching values (read scope == write scope, the pre-v0.34 default) when a client is registered without an explicit federated read list. Migrations v56-v60 (six new migrations on top of v55): - v56: ALTER TABLE ... ADD COLUMN federated_read TEXT[] NOT NULL DEFAULT '{}'. - v57 (F5): explicit CASE backfill so source_id IS NULL → '{}' (not an array containing NULL — codex caught this ambiguity during plan review). - v58: post-backfill validation. Fails loud if any row's source_id isn't in its federated_read array, pointing at a logic bug in v57 if fired. - v59: flip the source_id FK from ON DELETE SET NULL to ON DELETE RESTRICT now that federated_read provides the alternative scope-loss path. Pre-flip, deleting a source could silently widen any oauth_client to super-reader; post-flip, source delete is refused if any client references it (operator must revoke/re-scope first). - v60: GIN index on federated_read for array-containment queries. Auth wiring: - GBrainOAuthProvider.verifyAccessToken JOINs c.federated_read and populates AuthInfo.allowedSources. Pre-v56 / pre-v55 brains degrade via the existing isUndefinedColumnError fallback chain. - registerClientManual gains a federatedRead?: string[] parameter (defaults to [sourceId]). - DCR registerClient sets source_id='default' + federated_read=['default'] on the inserted row. - auth.ts CLI adds --federated-read SRC1,SRC2,... flag. The register-client output now prints "Federated reads:" so operators confirm the scope they set. Engines consume the federated array through the SearchOpts.sourceIds / PageFilters.sourceIds field that #861 added (no engine changes here — the plumbing was D9). sourceScopeOpts in operations.ts already prefers the auth.allowedSources array over scalar ctx.sourceId when set. Test seam: - test/book-mirror.test.ts now spawns the CLI with GBRAIN_HOME pointed at a tempdir so the test isn't sensitive to the developer's local ~/.gbrain/config.json. Pre-fix the test could silently inherit a real Postgres connection and hang past the default 5s test timeout. Fresh GBRAIN_HOME → "No brain configured" → exit 1 in <1s. - test/e2e/source-isolation-pglite.test.ts gains one more regression case: AuthInfo.allowedSources = [] (explicit empty) MUST NOT widen scope to "all sources" — the silent-widen footgun precedence ladder. - test/openai-compat-multimodal.test.ts is part of the wave's commits via the migrate.ts changes that bump the schema chain. typecheck-only fix on a captured-auth type was already in #875's tree. 6045 unit tests pass / 0 fail. typecheck clean. PGLite initSchema runs v55-v60 in ~786ms total (within the test-harness budget for tests using the canonical beforeAll engine pattern). Origin: PR #876 + plan-eng-review F5 (CASE backfill). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.34.0.0: MCP fix wave (#870 #909 #864 #861 #875 #876) VERSION + package.json + CHANGELOG bump for the six-PR MCP fix wave. Schema chain extends from v54 → v60; oauth_clients gains source_id + federated_read columns; auth'd MCP clients now stay inside their scope across all read-side ops; PKCE-only DCR works; --bind defaults to loopback; LiteLLM multimodal embedding ships. Contributed by @Hansen1018 (#870), @ding-modding (#909), @DukeDawg (#864), @toilalesondev (#861 + #876), @yoelgal (#875). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: update project documentation for v0.34.0.0 Sync README, CLAUDE.md, SECURITY.md, docs/architecture/topologies.md, and docs/mcp/DEPLOY.md to reflect the v0.34.0.0 MCP fix wave: - README: document --bind HOST default (loopback), --source + --federated-read register-client flags, PKCE public-client gate - SECURITY.md: note loopback-by-default for serve --http, update the trust-proxy contract to point at the new default - CLAUDE.md: annotate operations.ts (sourceScopeOpts helper), oauth-provider.ts (verifyAccessToken JOIN + PKCE public clients), serve-http.ts (--bind flag), gateway.ts (openai-compat multimodal + dim validation), mcp/server.ts (MCP_STDIO guard), auth.ts (--source + --federated-read), migrate.ts (v58-v63 chain), engine.ts (sourceIds field). Add 4 new test-file entries for source-isolation-pglite, openai-compat-multimodal, serve-stdio-lifecycle, oauth.test.ts PKCE cases - docs/architecture/topologies.md: source-scoped register-client example, --bind 0.0.0.0 for thin-client host setup - docs/mcp/DEPLOY.md: --bind explanation in the ngrok section, source-scoped client recipe - llms-full.txt: regenerated per the CLAUDE.md-edit chaser rule Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: bump v0.34.0.0 → v0.34.1.0 Renumbering the MCP fix wave from v0.34.0.0 to v0.34.1.0 so the release slot lands between master's v0.33.2.1 and the next minor. Touches every release-artifact mention: - VERSION: 0.34.0.0 → 0.34.1.0 - package.json: same - CHANGELOG.md header + "To take advantage" block - CLAUDE.md key-files annotations (8 entries that document this wave) - llms-full.txt (regen from CLAUDE.md) - README.md / SECURITY.md / docs/architecture/topologies.md / docs/mcp/DEPLOY.md - Wave code-comment markers ("// v0.34.0 (#NNN):" → "// v0.34.1 (#NNN):") Test files renamed alongside since they were committed with the wave. Commit subjects on the original 6 PR commits + the v0.34.0.0 bump commit ( |
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1a6b543cc5 |
v0.33.2.0 feat(search-lite): token budget + semantic query cache + intent weighting (#897)
* feat(search-lite): token budget + semantic query cache + intent weighting
Adds three additive features to the hybrid search pipeline. All
backward-compatible: existing callers see identical behavior unless they
opt in to the new options.
## 1. Token Budget Enforcement (src/core/search/token-budget.ts)
Cap the cumulative token cost of returned results so search payloads
fit downstream context windows. Greedy top-down walk; preserves caller
ordering; no re-rank. char/4 heuristic for token counting (no
tokenizer dependency \u2014 keeps the bun --compile bundle small).
SearchOpts.tokenBudget \u2014 numeric cap. Default undefined = no-op.
HybridSearchMeta.token_budget = { budget, used, kept, dropped }
HTTP query op: pass `token_budget` param.
## 2. Semantic Query Cache (src/core/search/query-cache.ts + migration v52)
Cache search results keyed by query embedding similarity. HNSW lookup:
`embedding <=> $1 < 0.08` (cosine similarity >= 0.92). Per-source
isolation so multi-source brains don\u2019t bleed. Per-row TTL (default 3600s).
Best-effort writes; all errors swallowed so the cache never breaks the
search hot path.
Migration v52 creates query_cache table with HALFVEC where pgvector >= 0.7;
falls back to VECTOR with the resolved config.embedding_dimensions dim.
New `gbrain cache` CLI: stats / clear --yes / prune.
Config keys: search.cache.enabled / similarity_threshold / ttl_seconds.
HybridSearchMeta.cache = { status, similarity?, age_seconds? }
Routed through new `hybridSearchCached(engine, query, opts)` wrapper;
the operations.ts query op now uses this wrapper so MCP/CLI calls
benefit automatically. Skipped for two-pass walks + non-default
embedding columns where cache semantics don\u2019t hold.
## 3. Zero-LLM Intent Weighting (src/core/search/intent-weights.ts)
Builds on the existing query-intent classifier (4 intents: entity /
temporal / event / general). New weight-adjustment layer applies subtle
per-intent nudges:
entity \u2192 boost keyword RRF + exact slug/title match
temporal \u2192 default recency=on when caller left it unset
event \u2192 boost keyword RRF (rare named entities) + soft recency
general \u2192 no-op (1.0 multipliers everywhere)
All adjustments are SUBTLE (max 1.25x). Caller-explicit options ALWAYS
win \u2014 intent weighting never silently overrides recency / salience.
Default ON; opt out via `opts.intentWeighting = false`. LLM query
expansion (expansion.ts) is still available and opt-in via
`opts.expansion = true` \u2014 it just isn\u2019t the default anymore.
HybridSearchMeta.intent now surfaces classifier output for debugging.
## Tests
test/token-budget.test.ts (10 tests, pure module)
test/intent-weights.test.ts (13 tests, pure module)
test/query-cache.test.ts (12 tests, PGLite)
test/hybrid-search-lite.serial.test.ts (9 tests, PGLite e2e)
Plus 105 pre-existing search tests still pass. `bun run verify` clean.
Co-authored-by: Wintermute <agents@garrytan.com>
* feat(search-mode): MODE_BUNDLES + resolveSearchMode wired into bare hybridSearch
Three named modes (conservative / balanced / tokenmax) that bundle the
search-lite knobs from PR #897 into a single config key. Mode resolution
lives in bare hybridSearch (NOT just the cached wrapper) so eval-replay
and eval-longmemeval — which call bare hybridSearch — test the same
mode-affected behavior as production. See [CDX-5+6] in the plan.
The mode bundle supplies DEFAULTS for intentWeighting, tokenBudget,
expansion, and searchLimit when the caller leaves those undefined.
Per-call SearchOpts and per-key config overrides still win (matches the
v0.31.12 model-tier resolution chain at model-config.ts:resolveModel).
knobsHash() exposes a stable SHA-256 of the resolved knob set; the cache
contamination hotfix (next commit) consumes it to prevent a tokenmax
write from being served to a conservative read.
Three new fields on HybridSearchMeta:
- mode (resolved mode name)
- existing token_budget meta now fires from bare hybridSearch too
Bare hybridSearch now applies tokenBudget at all three return paths
(no-embedding-provider, keyword-only-fallback, main). Previously only
hybridSearchCached enforced budget; eval commands missed it.
Tests: 37 unit cases pin the 3x7 bundle table cell-by-cell, the
resolution chain semantics, knobs hash determinism + cross-mode
separation, and the config-table parser. All 72 search-lite tests pass.
Bisect-friendly: this commit ONLY adds mode resolution. The cache-key
contamination hotfix [CDX-4] is a separate atomic commit (next).
* fix(query-cache): cross-mode contamination hotfix [CDX-4]
PR #897's query_cache keyed rows on sha256(source_id::query_text) only.
A tokenmax search (expansion=on, limit=50) populated a row that a
subsequent conservative call (no expansion, limit=10) read back, serving
the wrong-shape results. This is a real bug in PR #897 today, regardless
of the v0.32.3 mode picker work — Codex caught it in plan review.
Fix:
- Migration v56 adds query_cache.knobs_hash TEXT column + composite
(source_id, knobs_hash, created_at) index. Existing rows have NULL
knobs_hash and are excluded from lookups (silently re-populated with
the right hash on first hit — no orphan data, no destructive migration).
- cacheRowId(query, source, knobsHash) — knobsHash now part of the PK so
a tokenmax write and a conservative write for the same (query, source)
land in distinct rows.
- SemanticQueryCache.lookup({knobsHash}) filters WHERE knobs_hash = $.
- SemanticQueryCache.store({knobsHash}) writes the resolved hash.
- hybridSearchCached threads knobsHash from resolveSearchMode through
every cache call. Cache config (enabled/threshold/TTL) now reads from
the resolved mode bundle, not directly from the config table.
Tests (test/query-cache-knobs-hash.test.ts, 11 cases):
- cacheRowId bifurcates by knobsHash
- Tokenmax write does NOT contaminate conservative lookup
- Three modes coexist as distinct rows for same query
- Legacy NULL-knobs_hash rows are excluded from lookup
- Same-mode write updates in place (no duplicate rows)
All 58 cache + mode tests pass. Migration v56 applies cleanly on a fresh
PGLite brain.
Bisect-friendly: this commit is the cache-key hotfix alone. Mode
resolution wiring lives in the previous commit.
* feat(search-telemetry): in-process rollup writer + search_telemetry table
Migration v57 creates search_telemetry (date, mode, intent, count,
sum_results, sum_tokens, sum_budget_dropped, cache_hit, cache_miss,
first_seen, last_seen). PK (date, mode, intent) caps growth at ~4380
rows/year. Sums + counts only — averages derive at read time so
concurrent ON CONFLICT writes from multiple gbrain processes accumulate
correctly [CDX-17].
In-memory bucket flushed periodically (60s OR 100 calls) + on process
beforeExit/SIGINT/SIGTERM with a 2-second cap. The search hot path NEVER
waits on this write [D2, CDX-19].
Date-bucketed cache_hit / cache_miss columns make hit rate over --days N
derivable [CDX-18]. query_cache.hit_count is a lifetime counter and
can't be sliced by window.
Wired into bare hybridSearch via emitMeta: every search call sync-bumps
a bucket. flush() drains atomically by swapping the map before SQL writes
so a record() during flush lands in the new map.
readSearchStats(engine, {days}) returns the StatsWindow shape that
gbrain search stats consumes (next commit).
Tests: 16 unit cases pin record/flush/read semantics including
ON-CONFLICT-adds-raw-values, concurrent-flush coalescing, cache hit-rate
math, missing-table graceful degradation, and window clamping.
53 migrations apply on a fresh PGLite brain.
* feat(config): add unset + listConfigKeys + readLineSafe helper [CDX-7+8+9]
CDX-8: gbrain config has no unset path today. Required before
`gbrain search modes --reset` can clear search.* overrides.
- BrainEngine.unsetConfig(key) → returns rows deleted (0|1)
- BrainEngine.listConfigKeys(prefix) → exact-literal prefix match
with LIKE-escape on user-supplied % / _ / \ characters
- PGLiteEngine + PostgresEngine implementations
- `gbrain config unset <key>` and `gbrain config unset --pattern <prefix>`
sub-subcommands
CDX-9: readLine has no EOF detection or timeout. Mode-picker plan calls
out "TTY closes mid-prompt → defaults to balanced" but the raw helper
hangs forever. New readLineSafe(prompt, defaultValue, timeoutMs=60s):
- Returns defaultValue on stdin 'end' event
- Returns defaultValue on timeout
- Returns defaultValue on empty Enter
- Non-TTY stdin returns defaultValue immediately (e2e safe)
- Returns trimmed user input otherwise
Exported so install picker (next task) can use it.
Tests: 9 cases pin unset semantics + prefix matcher edge cases
(glob-wildcard escape, sort order, idempotent loop, search.* sweep).
All 53 migrations apply on a fresh PGLite brain.
* feat(init): install-time mode picker + upgrade banner
Install picker (src/commands/init-mode-picker.ts):
- Runs as a phase inside `gbrain init` AFTER engine.initSchema() so DB
config writes work [CDX-7].
- Idempotent: skipped on re-init if search.mode is already set.
- Smart auto-suggestion via recommendModeFor() reads
models.tier.subagent / models.default / OPENAI_API_KEY:
* Opus default/subagent → tokenmax (quality ceiling)
* Haiku subagent → conservative (4K budget keeps cost down)
* No OpenAI key → conservative (no LLM expansion possible)
* Sonnet / unknown → balanced (safe default)
- TTY shows menu via readLineSafe (60s timeout, defaults on EOF/empty).
- Non-TTY auto-selects + emits operator hint:
[gbrain] search mode: X (auto-selected — reason)
[gbrain] To change: gbrain config set search.mode <...>
- --json mode emits structured `{phase: 'search_mode_picker', ...}` event.
- Wired into both initPGLite and initPostgres flows.
Upgrade banner (src/commands/upgrade.ts):
- One-shot stderr banner in runPostUpgrade.
- State persisted via config key `search.mode_upgrade_notice_shown=true`
— fires at most once per install.
- Copy corrected per [CDX-1+2+3]: production query op STILL defaults
expand=true and limit=20. The banner reframes from "behavior is
regressing" to "named modes available + here's how to preserve
exact current shape."
Tests (test/init-mode-picker.test.ts, 16 cases):
- recommendModeFor heuristic for all 4 input shapes
- parseModeInput accepts numeric/named/case-insensitive, rejects garbage
- runModePicker non-TTY auto-selects + writes config
- Idempotent + --force re-prompt + JSON output
- Opus → tokenmax, Haiku → conservative real wiring through engine
* feat(cli): gbrain search modes/stats/tune command
Three sub-subcommands mirroring the gbrain models (v0.31.12) shape:
gbrain search modes [--json]
Read-only routing dashboard. Shows the three mode bundles, the active
mode, and the source of every resolved knob:
cache_enabled = true [override: search.cache.enabled]
tokenBudget = 4000 [mode: conservative]
Plus knob descriptions for legibility.
gbrain search modes --reset [--source <mode>]
Clears every search.* override (NOT search.mode itself). Preserves
the upgrade-notice state key. --source <mode> is a dry-run that
lists what --reset would change without writing — the paved path
[CDX-8] flagged as missing.
gbrain search stats [--days N] [--json]
Observability. Reads the search_telemetry rollup over the window
(clamps to [1, 365]). Prints cache hit rate, mode mix, intent mix,
budget drops, avg results/tokens. JSON output includes
_meta.metric_glossary block per [CDX-25].
gbrain search tune [--apply] [--json]
Recommendation engine. 5 rules cover the bug class:
- Insufficient data → "no_recommendations" status
- Conservative + high budget-drop rate → suggest balanced
- High cache hit rate (>85%) → suggest similarity threshold bump
- Tokenmax + Haiku subagent → suggest balanced (cost mismatch)
- Cache disabled but stats show usage → suggest re-enabling
--apply mutates config via setConfig / unsetConfig with a paste-ready
revert command printed at the end.
Registered in src/cli.ts dispatch table. 17 unit cases pin:
- Dashboard report shape + per-knob source attribution
- --reset preserves search.mode + notice key
- --source dry-run never writes
- stats reads telemetry rollup; --days clamps
- tune recommendation rules fire on real telemetry data
- --apply mutates config
- --help + unknown subcommand exit codes
* feat(eval): metric glossary module + auto-gen METRIC_GLOSSARY.md + CI guard
Single source of truth at src/core/eval/metric-glossary.ts. Every entry
carries 3 fields:
- industry_term (canonical IR/NLP literature name, preserved verbatim)
- eli10 (plain-English a 16-year-old can follow)
- range (numeric range + interpretation)
Covers 4 metric families:
- Retrieval: P@k, R@k, MRR, nDCG@k
- Stability: Jaccard@k, top-1 stability
- Statistical: p-value (paired bootstrap + Bonferroni), 95% CI
- Operational: cache hit rate, avg results/tokens, cost per query, p99 latency
Public surface:
- getMetricGloss(metric) → full entry or null
- eli10For(metric) → plain-English string or null
- buildMetricGlossaryMeta(metrics[]) → {metric → eli10} record for
JSON `_meta.metric_glossary` blocks per [CDX-25]. ONE block per
response, NOT sibling `_gloss` fields on every metric.
- renderMetricGlossaryMarkdown() → deterministic Markdown for the doc
Auto-generation:
scripts/generate-metric-glossary.ts emits docs/eval/METRIC_GLOSSARY.md.
Deterministic (same input → same bytes) so the CI guard can diff.
CI guard:
scripts/check-eval-glossary-fresh.sh regenerates into a temp file and
diffs against the committed doc. Out-of-date doc fails the build.
Wired into `bun run verify` (and therefore `bun run test:full`).
Tests (test/metric-glossary.test.ts, 18 cases):
- Every documented metric is present
- Every entry has all 3 required fields
- Accessors return null on unknown metrics (no throw)
- buildMetricGlossaryMeta silently drops unknown metrics
- renderer output is deterministic across calls
- Renderer groups metrics into 4 sections
docs/eval/METRIC_GLOSSARY.md: 5491 bytes, 124 lines, fresh.
* feat(doctor): search_mode + eval_drift checks + drift-watch module
src/core/eval/drift-watch.ts — curated retrieval watch-list [CDX-6].
Five patterns covering the surface that actually affects retrieval quality:
- src/core/search/ (search pipeline)
- src/core/embedding.ts (embedding shape)
- src/core/chunkers/ (chunk granularity)
- src/core/ai/recipes/anthropic.ts + openai.ts (expansion + embed routing)
- src/core/operations.ts (the query op definition)
Adding to the list is a deliberate act — requires a CHANGELOG line so
coverage grows on purpose, not by accident. Pure functions:
- matchesWatchPattern(path) — trailing-slash = prefix, bare = equality
- filesDriftedSince(repoRoot, sha?) — git diff --name-only wrapper
- watchedFilesDrifted(repoRoot, sha?) — composite
src/commands/doctor.ts — two new checks.
checkSearchMode [CDX-20]: status stays 'ok' (never warns, never docks
health score). Hint in message field. Three branches:
- unset → "search.mode is unset (using balanced fallback). Run
`gbrain search modes` to see what is running and pick a mode."
- mode + no overrides → "Mode: X (no per-key overrides — mode bundle
is canonical)."
- mode + overrides → "Mode: X with N per-key override(s) (k1, k2, …).
To consolidate to the pure mode bundle: gbrain search modes --reset"
Upgrade-notice state key (search.mode_upgrade_notice_shown) is excluded
from the override roster — it's not a knob.
checkEvalDrift [CDX-6]: surfaces uncommitted changes to retrieval-watched
files. Always 'ok'; operator-facing reminder. Names up to 3 drifted files
in the message + paste-ready re-eval command.
Both helpers exported (was: file-private) so tests can pin behavior
without walking the full runDoctor pipeline.
Tests: 12 drift-watch cases + 7 doctor-check cases. Pin watch-list shape,
prefix-vs-equality matcher semantics, missing-repo graceful failure, and
all three search_mode branches.
* feat(eval): --mode flag on longmemeval/replay + run-all + compare
Per-mode --mode flag plumbed into:
- gbrain eval longmemeval --mode <conservative|balanced|tokenmax>
Sets search.mode in the benchmark brain's config table; config is
in PRESERVE_TABLES so resetTables doesn't wipe it between questions.
Mode surfaces in the per-question NDJSON row.
- gbrain eval replay --mode <m> + --compare-limit N
--compare-limit forces a constant K across modes [CDX-13]; without
it, Jaccard@k against the captured baseline measures K-drift, not
quality. Mode is set once before the replay loop.
- NOT cross-modal per [CDX-11]: cross-modal scores OUTPUT against
TASK; it doesn't retrieve. Adding --mode there is theater.
New: gbrain eval run-all orchestrator (src/commands/eval-run-all.ts):
- Sweeps every requested mode × suite combination
- Sequential default per D9; --parallel N opt-in (clamped to mode count)
- Cost guard with split caps [CDX-15+16]:
--budget-usd-retrieval N (default $5)
--budget-usd-answer N (default $20)
Non-TTY refuses with exit 2 unless --yes AND explicit --budget-usd-*
flags pass. TTY refuses without --yes (defense against agent loops).
- estimateRunCost computes per-(suite,mode) breakdown including the
expansion-Haiku surcharge for tokenmax.
- Audit trail: appends to <repo>/.gbrain-evals/eval-results.jsonl
[CDX-23]. Personal brain (~/.gbrain) NEVER touched.
- v0.32.3 ships orchestrator + argv + guard + persist hook.
In-process per-suite invocation is a v0.32.4 follow-up (operator
runs the per-suite CLIs with the documented --mode flag for now;
each completion calls persistRunRecord to log).
New: gbrain eval compare report (src/commands/eval-compare.ts):
- Reads eval-results.jsonl, groups by (suite, mode), renders MD or JSON
- Most-recent (suite, mode, commit) wins when duplicates exist
- JSON output has schema_version=2 + _meta.metric_glossary block per
[CDX-25] (ONE block per response, not sibling _gloss fields)
- _meta.methodology field names the paired-bootstrap + Bonferroni
discipline per [CDX-14] so haters can reproduce
- Missing file → friendly hint pointing at `gbrain eval run-all`
Wired into eval dispatch table in src/commands/eval.ts.
Metric glossary fuzzy fallback: `recall@10` → `recall@k` lookup
(the glossary documents the family; report rows carry specific K
values). Routes through getMetricGloss for every call site.
Tests (42 cases total — all green):
- eval-run-all.test.ts (19): argv parser, cost estimate, guard
semantics for all 4 (over/under × tty/non-tty) shapes, persist hook
NDJSON shape.
- eval-compare.test.ts (5): JSON + MD output shapes, glossary
integration, missing-file graceful, mode filter, most-recent-wins.
- metric-glossary.test.ts (18): unchanged but updated assertions to
cover the fuzzy `@N` → `@k` fallback.
Pre-existing eval-replay / eval-longmemeval / eval-export / eval-prune
tests (42 cases) still pass — --mode + --compare-limit are additive.
* docs: methodology + CLAUDE.md/README/RESOLVER + skills/conventions
docs/eval/SEARCH_MODE_METHODOLOGY.md — haters-immune 8-section template.
Documents what the eval measures + does NOT measure, datasets + sizes
(LongMemEval n=500, Replay n=200, BrainBench n=1240 docs / 350 qrels),
random seed 42, run procedure verbatim, threats to validity (LongMemEval
English+technical skew, char/4 heuristic ~5-10% off, expansion ~97.6%
relative lift on this corpus), per-question raw outputs, pre-registered
expectations (tokenmax wins R@10 by 5-15pp, conservative wins cost by
5-15x, balanced lands within 3pp), re-run cadence anchored to the
src/core/eval/drift-watch.ts watch-list.
Statistical-significance section pins paired bootstrap with 10,000
resamples + Bonferroni correction across 3 modes × 4 metrics [CDX-14].
CLAUDE.md gets two new sections: ## Search Mode (3-mode table + resolution
chain + [CDX-4] cache contamination fix note + CLI commands) and ## Eval
discipline (single-source-of-truth glossary, methodology doc, eval_results
in repo NOT personal brain per [CDX-23]).
README.md Quick Start gets a paragraph naming the install picker, mode
heuristic, and the methodology link.
skills/conventions/search-modes.md NEW — convention file consumed by
brain-ops + query + signal-detector skills via the existing
`> **Convention:**` callout pattern. Routes "what mode" / "tune
retrieval" / "compare modes" queries to the right CLI surface.
skills/RESOLVER.md gets two new trigger rows pointing at
gbrain search * and gbrain eval compare.
* chore: regen llms.txt + llms-full.txt for v0.32.3 search-mode docs
bun run build:llms — picks up the new CLAUDE.md sections (Search Mode +
Eval discipline) and the docs/eval/SEARCH_MODE_METHODOLOGY.md addition.
build-llms.test.ts gate now passes.
* fix(doctor): wire search_mode + eval_drift checks into runDoctor main flow
The v0.32.3 search_mode + eval_drift helpers were inserted into the
DB-checks sub-helper at runDbChecks (line 345-355), but runDoctor itself
maintains its own check list and only calls the helpers' subset. Push
the two checks into the main runDoctor path (after the existing
sync_freshness check at line 2347) so they actually appear in
`gbrain doctor --json` output.
Both checks gated on engine !== null. Progress reporter heartbeat fires
for each. Both still return status 'ok' per [CDX-20] so health score is
preserved.
Verified end-to-end on a real Postgres brain: gbrain doctor --json now
includes 'search_mode' and 'eval_drift' in the checks array.
* fix: claw-test hang — DATABASE_URL leak + telemetry beforeExit deadlock
Two root causes for the hang, both fixed.
1. DATABASE_URL leak in claw-test scripted harness
The harness inherits the parent process's env via `...process.env`
for every phase child (init / import / query / extract / doctor).
When the e2e runner sets DATABASE_URL (for OTHER e2e tests), it
leaks into claw-test's children. `loadConfig` at src/core/config.ts:143
then flips inferredEngine to 'postgres' for every subsequent phase,
breaking the hermetic-PGLite-tempdir contract: phases race against
each other on a shared test Postgres while pointing at different
brain states.
Fix: strip DATABASE_URL + GBRAIN_DATABASE_URL from the child env
before forwarding. Re-apply GBRAIN_HOME / GBRAIN_FRICTION_RUN_ID
after the merge so a parent's override can't win. The harness is
PGLite-only by design.
2. Telemetry beforeExit deadlock
v0.32.3's recordSearchTelemetry installed a `process.on('beforeExit',
drainOnExit)` hook that wrapped the flush in `Promise.race([flush(),
setTimeout(2000)])`. beforeExit fires when the event loop empties,
but the hook enqueued NEW async work (the race's setTimeout +
pending flush), so the event loop never re-emptied. Short-lived
CLI invocations (`gbrain query "the"` finishing in ~100ms) ended
up waiting on the DB write indefinitely.
The claw-test harness spawns several short-lived gbrain queries.
Each one hung after its real work finished. The harness then waited
forever on its child subprocess's exit code.
Fix: drop the beforeExit + SIGINT + SIGTERM hooks. Per [CDX-19]'s
"stats are directional, not exact" contract, losing one unflushed
bucket on process exit is acceptable. The unref'd setInterval
handles long-running processes (HTTP MCP, autopilot, jobs work).
Short-lived CLI invocations exit immediately.
Verified:
- `gbrain query "the"` on a fresh PGLite brain exits in <1s (was
hanging forever).
- `bun test test/e2e/claw-test.test.ts` → 3 pass / 0 fail / 3.86s
(was hanging at the banner indefinitely).
- 85/85 e2e files / 574/574 tests pass including claw-test, with
DATABASE_URL set (the configuration that originally repro'd the
hang).
- 6235/6235 unit tests pass.
- Typecheck clean.
The two bugs interacted: the DATABASE_URL leak meant queries hit the
real Postgres (slow), making the beforeExit deadlock visible. Fixing
either alone would have masked the other. Both fixed in this commit.
* feat(install-picker): cost anchors in mode prompt + upgrade banner + docs
The install picker already asks explicitly (1/2/3 menu, default to the
recommendation on Enter). What was missing: a way to reason about the
cost tradeoff. Without numbers, "tokenmax" looks free and "conservative"
sounds restrictive; with numbers, the operator picks intentionally.
Cost anchors added everywhere the user encounters the mode choice:
- Install picker MENU_TEXT (gbrain init)
- Upgrade banner (gbrain upgrade post-upgrade)
- CLAUDE.md ## Search Mode section
- README.md Quick Start
- docs/eval/SEARCH_MODE_METHODOLOGY.md (with the math)
Anchors at Sonnet 4.6 downstream ($3/M input):
conservative ~$0.012/query ~$12/mo @ 1K ~$1,200/mo @ 100K
balanced ~$0.030/query ~$30/mo @ 1K ~$3,000/mo @ 100K
tokenmax ~$0.060/query ~$60/mo @ 1K ~$6,000/mo @ 100K
Plus tokenmax's Haiku expansion overhead: ~$1.50 per 1K queries on top.
Cache hits roughly halve these on a brain with repeat-query traffic.
The math is documented in SEARCH_MODE_METHODOLOGY.md so a reviewer can
audit each variable (T = ~400 tokens/chunk from the recursive chunker's
300-word target; N = `searchLimit` cap; R = downstream model rate from
src/core/anthropic-pricing.ts). Drift away from these numbers requires
updating CLAUDE.md + the picker + the methodology doc in lockstep — a
regression test pins the picker's anchor strings to enforce this.
The framing also names the cost rule honestly: the dominant cost isn't
gbrain (semantic cache is free; Haiku expansion is rounding-error). It's
the downstream agent reading retrieved chunks back into its context.
Operators who don't realize this pick badly.
Tests: 5 new regression cases in init-mode-picker.test.ts pin every
cost string in MENU_TEXT. Total 21/21 picker tests pass; 6240/6240
unit tests pass; verify gate green.
* docs: realistic-scale cost anchor for search modes
The per-query cost framing in the picker (~$0.012/$0.030/$0.060) is
honest but theoretical — it treats each search as an isolated billable
event. Real agent loops amortize a lot of context across turns via
Anthropic prompt caching, so the per-query 5x ratio doesn't translate
1:1 into total agent spend.
Added a "Realistic-scale anchor" section to SEARCH_MODE_METHODOLOGY.md
representing one heavy power-user agent loop running tokenmax:
- ~860 turns/mo (~29/day, one active agent)
- ~900K tokens/turn (system + tools + history + reasoning + search)
- ~$0.85/turn → ~$700/mo total agent spend at tokenmax
- ~88% Anthropic prompt-cache hit rate
Scaling balanced + conservative DOWN from that anchor:
- tokenmax → ~$700/mo, search ~22% of total spend
- balanced → ~$620/mo, search ~12% (saves ~$78/mo vs tokenmax)
- conservative → ~$575/mo, search ~5% (saves ~$124/mo vs tokenmax)
Honest takeaway: at realistic agent-loop scale WITH disciplined prompt
caching, mode choice saves 10-20% of total agent spend, not 5x. The
per-query math kicks back in for setups WITHOUT cache discipline (churn
the prompt prefix every turn → search payload becomes a larger fraction).
Both framings live in the doc.
CLAUDE.md ## Search Mode gets a forward-pointer paragraph naming the
"per-query math vs real-world spend" delta so agents reading the section
find the methodology footnote.
Numbers in the doc are anonymized + scaled away from any specific
deployment. No model names, no specific dollar figures from a real
production setup — just the per-turn / cache-hit-rate / search-count
shape ratios that a thoughtful operator can validate against their own
billing dashboard.
* feat(picker): mode × model cost matrix (25x corner-to-corner spread)
Previous version showed mode costs assuming Sonnet-only downstream.
That muted the spread to 5x and made mode choice look minor. Reality:
the downstream model tier is the BIGGER cost lever — pairing mode with
model is where the 25x spread lives.
New 3×3 matrix in the install picker, CLAUDE.md, methodology doc, README:
Haiku 4.5 Sonnet 4.6 Opus 4.7
($1/M input) ($3/M input) ($5/M input)
conservative $400/mo $1,200/mo $2,000/mo
balanced $1,000/mo $3,000/mo $5,000/mo
tokenmax $2,000/mo $6,000/mo $10,000/mo
(per-query cost @ 100K queries/mo, full search payload, no cache savings)
The methodology doc gets a new "Mode × Model matrix" section above the
realistic-scale anchor with concrete right-sizing guidance:
- tokenmax + Haiku: wrong direction. Haiku can't filter 50 chunks → noise
not signal. Pay Haiku rates, get sub-Haiku quality.
- conservative + Opus: wasted Opus. 200K context window starved on
retrieval depth. Pay Opus rates, get conservative-shape retrieval.
- Natural pairings span ~4x; the matrix corners span 25x. The natural
diagonal is where most users should land.
Realistic-scale anchor refreshed:
- tokenmax + Opus: ~$700/mo at 860 turns
- balanced + Sonnet: ~$430/mo
- conservative + Haiku: ~$170/mo
Plus a "mismatched pairings" section showing the math for tokenmax+Haiku
and conservative+Opus — both burn budget for no improvement.
Regression test updated: pins the 25x framing + the four anchor cells
(two corners + two diagonal mids) + the three downstream model rates.
22/22 picker tests pass. 6241/6241 unit tests pass. CI guards green.
* docs(picker): rescale cost matrix from 100K → 10K queries/mo (typical single user)
Most users running gbrain are single-user installs at ~10K queries/month,
not the 100K fleet-scale used in the original matrix. The picker numbers
($400 to $10,000/mo) looked alien to the actual audience. Rescaled to
10K with an explicit linear-scaling callout.
New matrix in picker, CLAUDE.md, README, methodology doc:
Haiku 4.5 Sonnet 4.6 Opus 4.7
($1/M) ($3/M) ($5/M)
conservative $40/mo $120/mo $200/mo
balanced $100/mo $300/mo $500/mo
tokenmax $200/mo $600/mo $1,000/mo
Still 25x corner-to-corner. Still 4x natural-diagonal spread. But now in
numbers a single user picks up and reasons about: "balanced + Sonnet at
$300/mo, that's fine" or "tokenmax + Opus at $1,000/mo, that's a
deliberate choice for max-quality high-stakes work."
Every surface updated:
- Install picker MENU_TEXT (with "scales linearly — multiply by 10
for 100K/mo" footnote so heavier users still see their number)
- CLAUDE.md ## Search Mode table + scaling prose
- README Quick Start
- methodology doc Mode × Model matrix section
- upgrade banner (post-upgrade notice)
Regression test updated: pins the 3 new anchor cells ($40, $300, $1,000)
+ the 10K/mo volume frame + the linear-scaling callout. 23/23 picker
tests pass, 6241/6241 unit tests pass, verify gate green.
Methodology doc's existing 1K/10K/100K Monthly cost breakdown tables
left intact (they already show the linear scaling explicitly).
* feat(picker): agent-facing install protocol + tokenmax default + [AGENT] directive
DX gap: an agent installing gbrain (OpenClaw, Hermes, Codex, Cursor) ran
gbrain init non-TTY, saw 2 stderr lines flash by, and silently auto-applied
a default search mode. The operator never saw the cost matrix or the choice.
At 25x corner-to-corner cost spread, that's surprise-spend territory.
Five surfaces fixed:
1. **Auto-suggest default flipped balanced → tokenmax.** The Sonnet/unknown
fallback now recommends tokenmax (preserves v0.31.x retrieval shape:
expand=on, generous result set). Haiku subagent → conservative still
wins (cost-sensitive signal). No-OpenAI-key → conservative still wins
(vector search not possible). Heuristic reordered: Haiku check now
fires BEFORE the Opus check, because a Haiku subagent loop signalling
cost sensitivity should win over a default-model heuristic.
2. **gbrain init non-TTY output rebuilt.** Previously: 2 stderr lines.
Now: the full 3×3 cost matrix + an explicit [AGENT] directive block
telling the agent to relay the matrix to its operator before
continuing. Includes a pointer to INSTALL_FOR_AGENTS.md Step 3.5 for
the full protocol.
3. **gbrain upgrade banner same treatment.** Existing v0.32.3 banner now
includes [AGENT] directive at the top so upgrading agents relay the
matrix to their operator instead of silently accepting v0.31.x →
v0.32.x default-applied behavior.
4. **INSTALL_FOR_AGENTS.md Step 3.5 NEW** with the matrix verbatim, the
exact paraphrasable ask-the-user wording, and the gbrain config set
commands to run after the operator picks. Plus a paragraph in the
Upgrade section pointing back at Step 3.5.
5. **AGENTS.md install checklist** gets a new Step 4 ("STOP — ask the
user about search mode") between init and the rest of the flow. The
agent's job description now explicitly says: silent acceptance is
the wrong default.
Tests (24/24 pass):
- Updated recommendModeFor heuristic order (Haiku floor > Opus default)
- New regression test: non-TTY output contains the matrix corners +
[AGENT] directive + INSTALL_FOR_AGENTS.md pointer
- withEnv() helper used for OPENAI_API_KEY mutation (test-isolation lint)
- Default-recommendation tests updated: Sonnet / unknown → tokenmax
Privacy + test-isolation gates clean. 6256/6256 unit tests pass.
---------
Co-authored-by: garrytan-agents <agents@garrytan.com>
Co-authored-by: Garry Tan <garrytan@gmail.com>
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182a144272 |
v0.33.1.1 fix: Voyage output_dimension + flexible-dim guard + OOM-cap rethrow (#962)
* fix: send Voyage output_dimension on embedding requests
* fixup: drop voyage-4-nano from flexible-dim set
Voyage's hosted /embeddings endpoint accepts `output_dimension` only for
the seven flexible-dim models (voyage-4-large, voyage-4, voyage-4-lite,
voyage-3-large, voyage-3.5, voyage-3.5-lite, voyage-code-3). voyage-4-nano
is an open-weight variant Voyage lists separately as fixed 1024-dim — the
hosted API rejects the parameter for it.
The recipe docstring previously claimed "all v4 variants" have flexible
dims, which is what led to nano being added to the allowlist in the first
place. Tighten the comment to name the hosted trio explicitly and call out
nano-as-open-weight.
Convert the test case at test/ai/gateway.test.ts from a positive assertion
(voyage-4-nano returns { dimensions: 512 }) to a negative regression pin
(voyage-4-nano returns undefined), so a future contributor can't silently
re-add nano without breaking this test.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix: Voyage OOM-cap rethrow + flexible-dim runtime validation (Codex P3 follow-ups)
Two follow-ups from Codex's adversarial review of PR #962, both Voyage-adjacent
correctness fixes that the original PR scope had filed as TODOs.
1. gateway.ts:619 Voyage OOM cap was theatrical
-------------------------------------------------
voyageCompatFetch's inbound response rewriter is wrapped in a try/catch that
falls back to the original response on parse failure — correct for "Voyage
returned JSON I can't reshape, let the SDK handle it." But the per-embedding
Layer 2 OOM cap at line 619 threw a bare `new Error(...)`, which the same
catch silently swallowed. Net result: an oversized base64 response (Layer 1
skipped because no Content-Length header) returned through to the AI SDK and
could OOM the worker on JSON.parse.
Fix: introduce `VoyageResponseTooLargeError`, throw it at both cap sites
(Content-Length Layer 1 at line 595 and per-embedding Layer 2 at line 619),
and rethrow it from the inbound try/catch via `if (err instanceof
VoyageResponseTooLargeError) throw err`. Pre-existing fall-back-on-parse-error
behavior for other thrown errors is preserved.
Regression-pinned by 2 new behavioral tests (mock fetch returns oversized
Content-Length / oversized base64; embed() throws with the expected message)
and a structural assertion in test/voyage-response-cap.test.ts that the
`instanceof VoyageResponseTooLargeError ⇒ throw` line stays put.
2. Voyage flexible-dim runtime validation + doctor check
-------------------------------------------------------
A brain configured for a Voyage flexible-dim model (voyage-4-large,
voyage-3-large, voyage-3.5, voyage-3.5-lite, voyage-4, voyage-4-lite,
voyage-code-3) without an explicit `embedding_dimensions` would fall back to
DEFAULT_EMBEDDING_DIMENSIONS=1536 — an OpenAI default that Voyage rejects.
Voyage's only accepted values are {256, 512, 1024, 2048}. Pre-fix the failure
surfaced as an HTTP 400 from Voyage that often got misclassified as a
transient network error.
Fix:
- `dims.ts` exports `VOYAGE_VALID_OUTPUT_DIMS` and `isValidVoyageOutputDim`.
- `dimsProviderOptions` throws `AIConfigError` with a paste-ready fix command
(`gbrain config set embedding_dimensions ...`) when a Voyage flexible-dim
model is configured with an invalid dim value.
- `gbrain models doctor` gets a new `embedding_config` probe that runs first
(zero tokens) and surfaces the misconfiguration before any chat/expansion
probes spend a single token. New probe status `config` + optional `fix`
hint rendered in human output.
Regression-pinned by 6 new unit tests covering the AIConfigError throw,
exact valid-values set, the bypass path for fixed-dim Voyage models, and
the fix-hint contents.
* chore: bump version and changelog (v0.33.1.1)
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: update project documentation for v0.33.1.1
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
---------
Co-authored-by: Eva <eva@100yen.org>
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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7be17261bc |
v0.32.3.0 skill: functional-area-resolver — pattern for compressing routing tables (#859)
* skill: compress-agents-md — functional-area resolver pattern Proven via A/B eval: 100% routing accuracy at 48% size reduction. Converts granular per-skill resolver rows into functional-area dispatchers with '(dispatcher for: ...)' sub-skill lists. Includes: - SKILL.md with full pattern docs, before/after examples, eval results - routing-eval.jsonl with 5 fixtures - Anti-patterns (resolver-of-resolvers pipe table = 15% accuracy) * skill: rename compress-agents-md → functional-area-resolver, cite prior art The contribution is a pattern (functional-area dispatcher with `(dispatcher for: ...)` clauses), not a file. Rename describes the contribution; triggers broaden to cover both AGENTS.md and RESOLVER.md phrasings. SKILL.md rewrite: - Three-model A/B table (Opus 4.7 / Sonnet 4.6 / Haiku 4.5) replaces the original Sonnet-only claim. Functional-areas beats baseline by +13 to +17pp training (lenient) across all three models at 48% the size. - Strict + lenient scoring documented side by side. Lenient (predicted shares dispatcher area with expected) matches production agent behavior. - Preconditions added: refuse to compress if file <12KB or working tree dirty. - Multi-file routing precedence section for the v0.31.7 RESOLVER.md/AGENTS.md merge case. - Mandatory verification step (≥95% via the harness). - Daily-doctor.mjs reference scrubbed (didn't exist in gbrain). - Three prior-art citations: AnyTool (arXiv:2402.04253), RAG-MCP (arXiv:2505.03275), Anthropic Agent Skills progressive disclosure. The pattern is the static-prompt analog of runtime hierarchical routing. routing-eval.jsonl: 8 positive (5 original + 3 broadened triggers) + 4 adversarial negatives targeting skillify, skill-creator, book-mirror, concept-synthesis to prove broadened triggers don't over-capture adjacent meta-skills. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * evals: A/B harness for functional-area-resolver (gateway-routed, strict + lenient scoring) evals/functional-area-resolver/ lives outside skills/ deliberately. The skillpack bundler walks skills/<skill>/ recursively, so an eval surface in there would copy harness + variants + fixtures + tests into every downstream install. The pattern (in SKILL.md) ships everywhere; the eval evidence stays in the gbrain repo. What ships: - Three variant resolvers in variants/ — baseline.md (verbose 25KB) and functional-areas.md (compressed 13KB) extracted from a real production AGENTS.md at git commits 93848ff3b^ and 93848ff3b (owner PII scrubbed). resolver-of-resolvers.md derived mechanically by stripping (dispatcher for: ...) clauses — the ablation case. - 20 hand-authored training fixtures + 5 held-out blind fixtures. - harness-runner.ts — TypeScript runner via gbrain gateway. Flags: --model {opus|sonnet|haiku|<full-id>}, --variants-dir, --variants for description-length sweeps, --parallel N (rate-lease bound), --limit N for smoke runs, --yes for non-TTY. - Every output row carries BOTH `correct` (strict) and `correct_lenient` (predicted shares dispatcher area with expected). Lenient matches production behavior. - Receipt header binds (model, prompt_template_hash, fixtures_hash, harness_sha, ts, cmd_args). Re-runs are auditable. - harness.mjs — thin Node shim that spawns the TS runner via bun. - rescore.mjs — zero-cost lenient re-score of an existing JSONL. - harness-runner.test.ts — 45 unit tests (no API key needed) covering every pure function plus the dispatcher-list parser. The prompt template is load-bearing: without the "drill into (dispatcher for: ...) list" instruction, every compression variant collapses to ~30-60%. Documented in SKILL.md and README.md. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * evals: baseline receipts (Opus 4.7 + Sonnet 4.6 + Haiku 4.5, 2026-05-11) Three canonical 225-row receipts (3 variants × 25 fixtures × 3 seeds per model). Each receipt header binds (model, prompt_template_hash, fixtures_hash, harness_sha, ts) so the published SKILL.md numbers are reproducible. Training corpus (n=20, lenient): baseline | Opus 81.7% | Sonnet 86.7% | Haiku 73.3% | 25KB functional-areas | Opus 98.3% | Sonnet 100% | Haiku 88.3% | 13KB resolver-of-resolvers | Opus 63.3% | Sonnet 41.7% | Haiku 65.0% | 10KB functional-areas beats baseline by +13 to +17pp across all three models at 48% the size. resolver-of-resolvers' Sonnet collapse (41.7%) is the SKILL.md "compression without dispatcher clause is broken" claim, observed. Held-out (n=5, lenient) saturates at 100% across most cells (Sonnet × resolver-of-resolvers is 73.3% — the same failure mode visible on a smaller sample). ~$3 API spend across all three runs. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * skill: wire functional-area-resolver into RESOLVER.md + manifests skills/RESOLVER.md gets a new row in Operational, adjacent to skillify. Triggers: "Compress my resolver", "AGENTS.md too large", "RESOLVER.md too big", "functional area dispatcher", "shrink routing table". skills/manifest.json adds the new entry and bumps manifest version 0.25.1 → 0.32.3.0 (loadOrDeriveManifest reads this for sync-guard). openclaw.plugin.json adds functional-area-resolver to the skills array and bumps version 0.25.1 → 0.32.3.0 so install receipts stop being stale (src/core/skillpack/installer.ts:307-311 uses manifest version on every install). Verified: - gbrain check-resolvable --json: 42/42 reachable, 0 errors. - gbrain routing-eval: 70/70 pass (100% structural). - bun test test/skillpack-sync-guard.test.ts: passes (manifest in sync). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.32.3.0 skill: functional-area-resolver — pattern for compressing routing tables Headline: compress a 25KB AGENTS.md down to 13KB without losing routing accuracy. Pattern proven across Opus 4.7, Sonnet 4.6, and Haiku 4.5 — beats the verbose baseline by +13 to +17pp at 48% the size. Empirical (training, n=20, 3 seeds, lenient): baseline 25KB: Opus 81.7% | Sonnet 86.7% | Haiku 73.3% functional-areas 13KB: Opus 98.3% | Sonnet 100% | Haiku 88.3% resolver-of-resolvers 10KB: Opus 63.3% | Sonnet 41.7% | Haiku 65.0% The (dispatcher for: ...) clause is the load-bearing signal. Strip it (the resolver-of-resolvers variant) and Sonnet collapses to 41.7% — the failure case the pattern's authors predicted, now observed. Files in this release: - VERSION + package.json bumped to 0.32.3.0 (4-segment per CLAUDE.md). - CHANGELOG.md: full empirical story, cross-model table, three prior-art citations (AnyTool, RAG-MCP, Anthropic Agent Skills progressive disclosure). - TODOS.md: nine v0.33.x follow-ups (dogfood on gbrain's own RESOLVER.md, CLI promotion to gbrain routing-eval --ab-compare, held-out corpus growth, cross-vendor Gemini+GPT verification, per-row description length sweep, structural compression to ~10KB, hierarchical area-of-areas, embedding pre-router, adversarial fixtures, prompt-design ablation doc). - llms-full.txt regenerated. Bisect-friendly history on this branch: |
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71ed8d0d21 |
v0.32.0 feat: 5 new embedding recipes + discoverability pass (closes 17-PR cluster) (#810)
* feat(ai/types): add resolveAuth + probe + user_provided_models fields
Foundation commit for the embedding-provider fix-wave (5 API-key recipes
+ discoverability pass). Three optional additions to the recipe contract:
- `EmbeddingTouchpoint.user_provided_models?: true` (D8=A): flag for
recipes that ship without a fixed model list. Consumed by the contract
test (permits empty `models[]`), gateway.ts:223 (replaces hardcoded
`recipe.id === 'litellm'` check in a follow-up commit), and
init.ts:resolveAIOptions (refuses implicit "first model" pick for
shorthand `--model <provider>`).
- `Recipe.resolveAuth?(env): {headerName, token}` (D12=A): unified auth
seam across embed / expansion / chat. Default behavior (returns
`Authorization: Bearer <env-key>`) covers the existing 9 recipes
unchanged. Recipes deviating (Azure with `api-key:`; future OAuth
providers) override this single seam instead of adding parallel
mechanisms in 3 places. Codex review caught that auth was triplicated
at gateway.ts:281/728/931; D12=A unifies all three in one follow-up
commit.
- `Recipe.probe?(): Promise<{ready, hint?}>` (D13=A): recipe-owned
readiness check for local-server providers (ollama, llama-server).
Replaces the hardcoded `recipe.id === 'ollama'` special case in
providers.ts. Wrapped in 200ms timeout at the call sites.
Pure type additions — no behavior change. Typecheck green; existing 9
recipes work unchanged because all three fields are optional.
Plan: ~/.claude/plans/ok-lets-turn-this-enumerated-sonnet.md (decisions
D8=A, D11=C, D12=A, D13=A).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(ai/gateway): unify openai-compatible auth via Recipe.resolveAuth (D12=A)
Pre-v0.32, openai-compatible auth was duplicated 3 times in gateway.ts at
instantiateEmbedding, instantiateExpansion, instantiateChat — with subtle
drift (embedding had a `${recipe.id.toUpperCase()}_API_KEY` fallback the
other two lacked). Codex outside-voice review caught this during /plan-eng-review.
D12=A: unify all three through `Recipe.resolveAuth?(env)` (declared in the
prior commit). Two new module-level helpers:
- `defaultResolveAuth(recipe, env, touchpoint)` — applied when a recipe
doesn't declare its own resolver. Returns Authorization Bearer with
`auth_env.required[0]`, falling back to the first present
`auth_env.optional` env var, or 'unauthenticated' for no-auth recipes
like Ollama. Throws AIConfigError with the recipe's setup_hint when
required env is missing.
- `applyResolveAuth(recipe, cfg, touchpoint)` — returns
`createOpenAICompatible` options. Bearer-via-Authorization paths use
the SDK's native `apiKey` field; custom-header paths (Azure: api-key)
use `headers` and OMIT apiKey to avoid double-auth leaks.
The 3 `case 'openai-compatible':` branches in instantiateEmbedding (line
~281), instantiateExpansion (line ~728), instantiateChat (line ~931) each
collapse from ~10 lines of bespoke auth handling to a single
`applyResolveAuth(recipe, cfg, '<touchpoint>')` call.
Also: the litellm-template hardcode at gateway.ts:223 (`recipe.id ===
'litellm'`) is replaced with a union check for
`EmbeddingTouchpoint.user_provided_models === true` (D8=A wire-through
per Codex finding #3). Pre-v0.32 builds keep working via back-compat
`recipe.id === 'litellm'` clause; new recipes declaring
user_provided_models pick up the same gating automatically.
Existing 9 recipes (openai, anthropic, google, deepseek, groq, ollama,
litellm-proxy, together, voyage) gain zero per-recipe edits — the
default resolver covers their existing behavior. Behavior change for
ollama expansion/chat only: now reads OLLAMA_API_KEY when set (pre-v0.32
silently passed 'unauthenticated' for those touchpoints; embedding
already read it). Ollama servers ignore the header so no real-world
impact; this aligns the 3 touchpoints.
Tests: bun test test/ai/ — 77/77 pass.
Plan: ~/.claude/plans/ok-lets-turn-this-enumerated-sonnet.md (D8=A,
D12=A; addresses Codex findings #3, #4).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* test(ai): IRON RULE regression test for v0.32 resolveAuth refactor
Pins the contract that the v0.32 D2/D12=A resolveAuth refactor preserves
auth behavior for the 9 existing recipes (openai, anthropic, google,
deepseek, groq, ollama, litellm-proxy, together, voyage).
10 cases covering:
- the 9 expected recipe ids are still registered
- every recipe with non-empty required[] returns Authorization Bearer <key>
- missing required env throws AIConfigError naming recipe + touchpoint + env-var
- Ollama (empty required, optional set) reads first present optional env
- Ollama (no env) falls back to "Bearer unauthenticated"
- all 3 touchpoints (embedding/expansion/chat) produce identical auth
shape for the same recipe + env (this is the core regression: pre-v0.32,
embedding had a fallback the other two lacked)
- applyResolveAuth converts Authorization Bearer to {apiKey} (SDK-native)
- applyResolveAuth respects a custom-header override (Azure preview; the
recipe ships in commit 8) and emits {headers} WITHOUT apiKey to avoid
double-auth
- native-* recipes (openai, anthropic, google) intentionally have no
resolveAuth declared (they use AI-SDK adapters directly)
- all openai-compatible recipes ship without resolveAuth in v0.32 (default
applies); the first override is Azure in commit 8
Also: export `defaultResolveAuth` and `applyResolveAuth` as @internal
gateway helpers so tests can pin them directly. Mirrors the pattern of
`splitByTokenBudget` and `isTokenLimitError` already exported with the
same @internal annotation.
Tests: bun test test/ai/ — 87/87 pass (10 new + 77 existing).
Typecheck: clean.
Plan: ~/.claude/plans/ok-lets-turn-this-enumerated-sonnet.md (IRON RULE
per Section 3 test review).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(ai): add llama-server recipe (#702 reworked)
10th recipe in the registry; first to ship Recipe.probe (D13=A) and the
second user_provided_models recipe (litellm-proxy is the first).
llama.cpp's llama-server exposes an OpenAI-compatible /v1/embeddings
endpoint. Distinct from Ollama: different default port (8080), different
model-management story (you launch it with --model <path>; the server
serves whatever was passed). Recipe ships with `models: []`,
`user_provided_models: true`, `default_dims: 0` so the wizard refuses
implicit defaults and forces explicit --embedding-model + --embedding-dimensions.
Added:
- src/core/ai/recipes/llama-server.ts (61 lines)
- probeLlamaServer() in src/core/ai/probes.ts; reads
LLAMA_SERVER_BASE_URL with default http://localhost:8080/v1
- Registered in src/core/ai/recipes/index.ts (10 recipes total now)
- test/ai/recipe-llama-server.test.ts (8 cases): registered + shape,
user_provided_models flag, probe declared + reachability fail-with-hint,
default-auth covering no-env / API_KEY / URL-shaped-only paths
Hardening: defaultResolveAuth in gateway.ts now skips URL-shaped optional
env entries (names ending in _URL or _BASE_URL) when picking a fallback
auth token. Pre-fix, OLLAMA_BASE_URL=http://my-ollama would have become
the Bearer token; Ollama ignores it but llama-server (and future
local-server recipes) shouldn't depend on the server tolerating garbage
auth. The regression test (recipes-existing-regression) gains one case
pinning this contract.
Per-recipe test file follows D7=B (per-recipe over DRY for readability).
Plan: ~/.claude/plans/ok-lets-turn-this-enumerated-sonnet.md (commit 4
of 11). Reworked from #702 because the original PR didn't model the
recipe-owned probe pattern (D13=A) or user_provided_models (D8=A).
Tests: bun test test/ai/ — 95/95 pass (8 new + 87 existing).
Co-Authored-By: SiyaoZheng <noreply@github.com>
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(ai): add MiniMax recipe (#148 reworked)
11th recipe. embo-01 model, 1536 dims, $0.07/1M tokens.
OpenAI-compatible at api.minimax.chat. MiniMax requires a `type:
'db' | 'query'` field for asymmetric retrieval (documents indexed with
type='db', queries embedded with type='query'). gbrain has no
query/document signal at the embed-call site today, so v1 defaults to
type='db' for both indexing and retrieval — same vector space, symmetric
similarity. Asymmetric query support is a follow-up TODO that needs the
embed seam to thread query/document context.
Plumbed via src/core/ai/dims.ts: dimsProviderOptions returns
{openaiCompatible: {type: 'db'}} for modelId === 'embo-01'.
Conservative max_batch_tokens=4096 declared (MiniMax docs don't publish
the limit). Recursive halving in the gateway catches token-limit errors
at runtime.
Tests: bun test test/ai/ — 101/101 (6 new + 95 prior).
Plan: ~/.claude/plans/ok-lets-turn-this-enumerated-sonnet.md (commit 5
of 11). Reworked from #148.
Co-Authored-By: cacity <20351699+cacity@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(ai): add Alibaba DashScope recipe (#59 split, part 1/2)
12th recipe. text-embedding-v3 (current) + text-embedding-v2; 1024
default dims with Matryoshka options [64, 128, 256, 512, 768, 1024].
OpenAI-compatible at dashscope-intl.aliyuncs.com. China-region users
override via cfg.base_urls['dashscope']; v0.32 ships with the
international default.
Conservative max_batch_tokens=8192 + chars_per_token=2 declared because
Alibaba doesn't publish a hard batch limit and text-embedding-v3 mixes
English + CJK heavily (CJK density closer to Voyage than OpenAI tiktoken).
Tests: bun test test/ai/ — 106/106 (5 new + 101 prior).
Plan: ~/.claude/plans/ok-lets-turn-this-enumerated-sonnet.md (commit 6
of 11). Reworked from #59 (DashScope+Zhipu split into 2 commits per
the plan; Zhipu lands next).
Co-Authored-By: Magicray1217 <267836857+Magicray1217@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(ai): add Zhipu AI (BigModel) recipe (#59 split, part 2/2)
13th recipe. embedding-3 (current) + embedding-2; 1024 default dims
with Matryoshka options [256, 512, 1024, 2048].
OpenAI-compatible at open.bigmodel.cn. embedding-3 at 2048 dims exceeds
pgvector's HNSW cap of 2000 — those brains fall back to exact vector
scans via the existing chunkEmbeddingIndexSql policy at
src/core/vector-index.ts. Default stays at 1024 (HNSW-fast); users who
want maximum fidelity opt into 2048 via --embedding-dimensions and
accept the slower retrieval.
Tests pin the HNSW boundary: 1024 returns the index SQL, 2048 returns
the skip-index/exact-scan SQL.
Tests: bun test test/ai/ — 112/112 (6 new + 106 prior).
Plan: ~/.claude/plans/ok-lets-turn-this-enumerated-sonnet.md (commit 7
of 11). Reworked from #59. Together with DashScope (commit 6), closes
the China-region embedding gap users repeatedly reported (DashScope
covers Alibaba, Zhipu covers BigModel; both ship with international
endpoints by default).
Co-Authored-By: Magicray1217 <267836857+Magicray1217@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(ai): add Azure OpenAI recipe (#459 reworked)
14th recipe and the first to exercise both v0.32 architectural seams:
- resolveAuth (D12=A) returns `{headerName: 'api-key', token: <key>}`
instead of the default Authorization Bearer. Azure rejects double-auth,
so applyResolveAuth puts the key in `headers` and OMITS apiKey.
- A new `Recipe.resolveOpenAICompatConfig?(env)` seam (Recipe.ts) lets
the recipe template the baseURL from env (Azure: ENDPOINT + DEPLOYMENT
combine into a non-/v1 path) and inject a custom fetch wrapper that
splices ?api-version= onto every request URL.
The fetch wrapper is type-safe via `as unknown as typeof fetch`; AI SDK
never calls TS's strict `preconnect()` method on the wrapper so the cast
is sound. `applyOpenAICompatConfig` (new gateway helper) routes through
the recipe override or falls back to the pre-v0.32 base_urls/base_url_default
behavior — existing 13 recipes get zero behavior change.
API version defaults to `2024-10-21` (current stable as of 2026-05);
override via AZURE_OPENAI_API_VERSION env. Endpoint trailing slash gets
stripped during URL construction so users can copy-paste from the Azure
portal.
Tests (12 cases in test/ai/recipe-azure-openai.test.ts):
- resolveAuth returns api-key NOT Authorization Bearer
- applyResolveAuth puts key in headers, NOT apiKey (no double-auth)
- baseURL templating from endpoint + deployment, with trailing-slash strip
- AIConfigError on missing endpoint OR deployment
- fetch wrapper splices api-version (default + AZURE_OPENAI_API_VERSION override)
- fetch wrapper does NOT double-add api-version when caller already set it
- applyOpenAICompatConfig honors recipe override
IRON RULE regression test updated: now asserts azure-openai is the
documented exception that overrides resolveAuth; any future override
needs review.
Tests: bun test test/ai/ — 124/124 (12 new + 112 prior).
Plan: ~/.claude/plans/ok-lets-turn-this-enumerated-sonnet.md (commit 8
of 11, plus the resolveOpenAICompatConfig seam discovered during fold-in).
Reworked from #459. The original PR proposed a hardcoded AzureOpenAI
client switch; this implementation routes through the unified seams so
future Azure-shaped providers (other custom-URL services) can reuse them.
Co-Authored-By: JamesJZhang <32652444+JamesJZhang@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(ai): adjacent fixes — no_batch_cap (#779) + config-key fallbacks (#121)
Two small ergonomics fixes folded together (#765 deferred — see TODOS.md
follow-up; the CJK PGLite extraction was bigger than the plan estimated).
#779 reworked (alexandreroumieu-codeapprentice): silence the
missing-max_batch_tokens startup warning for recipes with genuinely
dynamic batch capacity. New `EmbeddingTouchpoint.no_batch_cap?: true`
field. Set on ollama (capacity depends on locally loaded model +
OLLAMA_NUM_PARALLEL), litellm-proxy (depends on backend), llama-server
(set by --ctx-size at server launch). Three less stderr warnings on
every gateway configure; google still warns (it's a real fixed-cap
provider that ought to ship a max_batch_tokens declaration).
Bonus: litellm-proxy now declares `user_provided_models: true`, removing
the last consumer of the legacy `recipe.id === 'litellm'` hardcode in
gateway.ts:223 (D8=A wire-through completion).
#121 reworked (vinsew): self-contained API keys. Two parts:
1. config.ts: ANTHROPIC_API_KEY env merge was silently missing.
loadConfig() merged OPENAI_API_KEY but not ANTHROPIC_API_KEY into
the file-config-shape result. One-line addition.
2. cli.ts:buildGatewayConfig: when ~/.gbrain/config.json declares
openai_api_key / anthropic_api_key but the process env doesn't
have those env vars set (common for launchd-spawned daemons,
agent subprocess tools, containers that don't propagate
~/.zshrc), fold the config-file values into the gateway env
snapshot. Process env still wins (loaded last) so per-process
overrides keep working.
Tests (4 cases in test/ai/no-batch-cap-suppression.test.ts):
- Ollama / LiteLLM / llama-server all declare no_batch_cap: true
- configureGateway does NOT warn for those three
- configureGateway STILL warns for google (regression guard)
- Cross-cutting invariant: empty-models recipes declare user_provided_models
Tests: bun test test/ai/ — 128/128 (4 new + 124 prior).
Plan: ~/.claude/plans/ok-lets-turn-this-enumerated-sonnet.md (commit 9 of 11).
#765 (Hunyuan PGLite + CJK keyword fallback) deferred to TODOS.md
follow-up; the CJK extraction (~150 lines + scoring logic + tests) is
larger than the wave's adjacent-fix lane should carry. Closes that PR
with a deferral note.
Co-Authored-By: alexandreroumieu-codeapprentice <noreply@github.com>
Co-Authored-By: vinsew <noreply@github.com>
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(discoverability): doctor alt-provider advisory + init user_provided_models refusal
Two small but high-leverage changes that address the discoverability
problem the v0.32 wave is trying to fix.
src/commands/doctor.ts: new `alternative_providers` check (8c). After
the existing embedding-provider smoke test, walks listRecipes() and
surfaces any recipe whose required env vars are ALL present in the
process env but is not the currently configured provider. Reports as
status: 'ok' with an informational message — never errors. Helps users
discover that, e.g., `OPENAI_API_KEY=x DASHSCOPE_API_KEY=y` configured
for openai means they have a Chinese-region alternative ready without
extra setup.
src/commands/init.ts: user_provided_models recipes (litellm, llama-server)
now refuse the implicit "first model" pick from shorthand --model with
a structured setup hint pointing the user at the explicit form
`--embedding-model <provider>:<your-model-id> --embedding-dimensions <N>`.
Pre-fix, shorthand --model litellm threw "no embedding models listed"
which was technically correct but unhelpful. The new error includes the
recipe's setup_hint when available.
Tests: bun test test/ai/ — 128/128 pass; typecheck clean.
Plan: ~/.claude/plans/ok-lets-turn-this-enumerated-sonnet.md (commit 10
of 11). The full interactive provider chooser in init.ts (the bigger
piece of the discoverability lane) is deferred to a v0.32.x follow-up;
this commit ships the doctor advisory + cleaner refusal that close the
80% case.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs(v0.32.0): embedding-providers.md + README callout + CHANGELOG + TODOS.md
Final commit of the v0.32 wave. Closes the discoverability gap that
generated the 17-PR community cluster.
- New docs/integrations/embedding-providers.md: capability matrix, decision
tree, per-recipe one-pagers, OAuth provider notes, "my provider isn't
listed" pointer to LiteLLM proxy. Voice: capability not marketing per
CLAUDE.md voice rules.
- README.md: embedding-providers callout near the top, naming the count
(14 recipes) and pointing at the new doc.
- CHANGELOG.md: v0.32.0 entry following the verdict-headline format from
CLAUDE.md voice rules. Lead-with-numbers ("14 providers, 5 new"), what-this-
means-for-users closer, "to take advantage" upgrade block, itemized
changes, contributor credits, deferred-with-context list.
- VERSION + package.json: 0.31.1 → 0.32.0. Minor bump justified by the
new public Recipe surface (resolveAuth, resolveOpenAICompatConfig, probe,
user_provided_models, no_batch_cap fields), the new OAuth subsystem
scaffold (deferred to v0.32.x but typed in v0.32.0), and the 5 new
recipes.
- TODOS.md: 7 follow-up entries for the v0.32 wave's deferred work
(Vertex ADC, Copilot OAuth, Codex OAuth, CJK PGLite, interactive
wizard, real-credentials CI matrix, MiniMax asymmetric retrieval,
multimodal hardcode un-stuck). Each entry has full context + the
exact file paths + the spike work needed so a future contributor can
pick up cleanly.
Tests: bun test test/ai/ — 128/128 pass; typecheck clean.
Plan: ~/.claude/plans/ok-lets-turn-this-enumerated-sonnet.md (commit 11
of 11). Wave complete: 11 commits, ~1500 net lines, 5 new recipes, full
docs, doctor advisory, IRON RULE regression test, 7 TODOS for the
v0.32.x follow-up wave.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: regenerate llms.txt + llms-full.txt for v0.32.0
After commit
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v0.31.12 fix: canonical Anthropic model IDs + tier routing surface + gbrain models CLI (#844)
* fix: canonical Anthropic model IDs + reverse alias + Opus 4.7 pricing
Replace claude-sonnet-4-6-20250929 with claude-sonnet-4-6 everywhere it
appears as a model ID. Starting with Claude 4.6, Anthropic API IDs are
dateless and pinned — the date suffix was carried forward from Sonnet 4.5
by mistake, producing a phantom ID that 404'd on every call.
Production impact in v0.31.6: isAvailable("chat") returned false in every
code path that loaded the recipe's model list, and extractFactsFromTurn
silently returned []. The headline real-time facts extraction feature
was a no-op on the happy path.
- gateway.ts:46 DEFAULT_CHAT_MODEL -> anthropic:claude-sonnet-4-6
- recipes/anthropic.ts: chat + expansion model lists drop date suffix;
remove wrong-direction alias (claude-sonnet-4-6 -> -20250929);
add reverse alias (-20250929 -> claude-sonnet-4-6) so stale user
configs in models.dream.synthesize etc. keep working
- facts/extract.ts: routes through resolveModel; both fallbacks corrected
- anthropic-pricing.ts: Opus 4.7 corrected $15/$75 -> $5/$25 per
Anthropic docs (the $15/$75 was Opus 4.0 pricing)
- cross-modal-eval/runner.ts: PRICING now reads from ANTHROPIC_PRICING
for Anthropic models instead of duplicating the map (single source of
truth — fixes the drift trap that motivated this whole patch)
Tests: cherry-pick PR #830's test/anthropic-model-ids.test.ts verbatim
(6 recipe-shape guardrails). Update gateway-chat tests to assert reverse
alias resolves correctly. Update budget-meter test for new Opus pricing.
Co-Authored-By: garrytan-agents <garrytan-agents@users.noreply.github.com>
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat: model tier system + recipe-models merge + async reconfigure hook
Add 4-tier model routing (utility/reasoning/deep/subagent) so users can
swap defaults with one config key. Each tier maps to a class of work;
override globally via models.default or per-tier via models.tier.<tier>.
Codex flagged three real architecture issues in the v0.31.12 plan review;
this commit addresses each.
F3 — sync/async timing of configureGateway:
- buildGatewayConfig stays synchronous (pre-engine-connect callers
keep working)
- New reconfigureGatewayWithEngine(engine) async function re-resolves
expansion + chat defaults through resolveModel after engine.connect()
- cli.ts wires the re-stamp into the post-connect path
F4/F5 — softening assertTouchpoint was too broad:
- Earlier plan was to flip native-recipe validation from throw to warn,
affecting gateway.chat AND gateway.expand AND gateway.embed
- Instead: per-gateway-instance recipe-models merge. assertTouchpoint
gets an optional extendedModels Set; when the user opted into a model
via config, it bypasses the throw. Source-code typos still fail fast.
- Existing contract test (test/ai/gateway-chat.test.ts:106) preserved
Tier defaults are TIER_DEFAULTS in model-config.ts. Resolution chain
inserts at step 5 (between models.default and env var). Each existing
resolveModel call site gains a tier: arg — think (deep), cycle/synthesize
(reasoning + utility for verdict), patterns/drift (reasoning), auto-think
(deep), facts/extract (reasoning).
Plus 10 new tests pinning tier precedence, subagent-tier fallback when
models.default is non-Anthropic, and the F6 alias-chain conflict case.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat: subagent runtime enforcement for non-Anthropic models (3 layers)
The subagent loop uses Anthropic's Messages API with prompt caching on
system + tools. OpenAI/Google have different shapes. Setting
models.default = openai:gpt-5.5 and routing the subagent there silently
breaks the loop.
Codex F1+F2+F13 in the v0.31.12 plan review pointed out that "warn at
doctor" wasn't enough — handlers/subagent.ts:148 still did
`const model = data.model ?? DEFAULT_MODEL` and called Anthropic directly,
so a job submitted with data.model = openai:gpt-5.5 bypassed any tier
logic and failed at runtime with a confusing provider error.
Three layers of enforcement, defense in depth:
Layer 1 (queue.ts:add) — submit-time guard. When name === 'subagent'
and data.model is set, validate the provider. Non-Anthropic rejects
before the job enters the queue.
Layer 2 (handlers/subagent.ts) — tier-resolution fallback. The handler
routes through resolveModel({ tier: 'subagent' }). If the chain resolves
to a non-Anthropic provider (via models.default or models.tier.subagent),
the resolver warns + falls back to TIER_DEFAULTS.subagent
(claude-sonnet-4-6).
Layer 3 (doctor.ts:checkSubagentProvider) — surfacing layer. Warns when
models.tier.subagent or models.default is explicitly set to a
non-Anthropic provider, with a paste-ready fix command. Lets users see
config drift before submitting a job.
Tests: 3 new cases in test/agent-cli.test.ts asserting the queue-level
guard rejects non-Anthropic data.model. Existing test/subagent-handler
suite still passes.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat: gbrain models CLI + doctor probe + silent-no-op regression test
New gbrain models CLI gives the agent and user visibility into routing.
Read mode prints the tier table, current overrides, per-task config,
and aliases with source-of-truth attribution per row. Doctor subcommand
fires a 1-token probe to each configured chat/expansion model and
classifies failures (model_not_found / auth / rate_limit / network /
unknown) so config-time invalid IDs surface without waiting for a
production call that silently degrades.
Per Codex F11 — no specific dollar cost claim in either the help text
or the CHANGELOG (providers have minimum-output billing and prompt-cache
rounding that vary). Probe is opt-in (gbrain doctor --probe-models),
never auto-runs. --skip=<provider> narrows the matrix for cost-sensitive
operators.
Per Codex F7+F8+F15 (the structural regression gap): new
test/facts-extract-silent-no-op.test.ts is THE regression test for the
bug class that motivated v0.31.12. Five cases including the smoking-gun:
when chat IS available, extractFactsFromTurn MUST actually call the chat
transport, not silently return []. Uses the gateway's
__setChatTransportForTests seam so it runs in every shard with no API key.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore: bump version and changelog (v0.31.12)
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: document v0.31.12 model tier system + gbrain models CLI
Add CLAUDE.md Key Files annotations for the v0.31.12 work:
src/core/model-config.ts (tier system + isAnthropicProvider + TIER_DEFAULTS),
src/core/ai/model-resolver.ts (assertTouchpoint extendedModels arg),
src/core/ai/gateway.ts (reconfigureGatewayWithEngine + extended-models registry),
src/core/minions/queue.ts (subagent submit-time guard, layer 1 of 3),
src/commands/models.ts (new gbrain models CLI + doctor probe),
src/commands/doctor.ts (subagent_provider check, layer 3 of 3),
src/core/ai/recipes/anthropic.ts (canonical model IDs + reverse alias),
src/core/anthropic-pricing.ts (Opus 4.7 corrected to \$5/\$25).
Add CLAUDE.md commands section for gbrain models + gbrain models doctor
+ power-user config recipes. Add README.md command-table rows for the
same. Regenerate llms-full.txt so the bundled docs stay in sync.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: scrub --probe-models reference (flag not actually wired)
The v0.31.12 CHANGELOG and skills/conventions/model-routing.md both
referenced `gbrain doctor --probe-models` as an integrated probe entry
point. The flag was never implemented — only `gbrain models doctor`
landed as the probe surface. Caught by /document-release subagent.
Drop the references rather than wire an untested flag at the last minute.
The probe is reachable via `gbrain models doctor`; users who want it
in doctor's output run that command separately.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: garrytan-agents <garrytan-agents@users.noreply.github.com>
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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v0.31.0 feat: hot memory — facts hook + recall CLI + MCP _meta + consolidate phase (#785)
* v0.31 feat(migrate): facts hot memory schema (migration v40) Phase 1 of v0.31 hot-memory. - New facts table with source_id (TEXT FK to sources, per-source isolation), kind CHECK (event/preference/commitment/belief/fact), visibility CHECK (private/world for takes-style ACL parity), valid_from/valid_until/ expired_at/superseded_by for temporal + supersession audit, and consolidated_at/consolidated_into pointing at takes(id) for the dream- cycle hot→cold bridge. - Embedding column dim resolved at migration time from config.embedding_dimensions so non-OpenAI brains (Voyage etc) work out-of-the-box. HALFVEC where pgvector >= 0.7; falls back to VECTOR with stderr warn on older versions. Matching opclass per column type (halfvec_cosine_ops vs vector_cosine_ops). - 5 partial indexes leading on source_id so every read uses the trust boundary as part of the index, not a callback. HNSW partial index excludes expired/null rows so footprint stays proportional to active fact count. - RLS DO-block matches takes pattern (Postgres BYPASSRLS gate; PGLite no-op). - v0_31_0.ts orchestrator follows v0_28_0.ts pattern — phase A asserts schema version >= 40 + facts table presence; runner owns ledger. All 87 existing migrate.test.ts cases pass. PGLite smoke test confirms table + indexes + CHECK constraints + ON DELETE CASCADE all behave. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 chore(version): bump VERSION + package.json to 0.31.0 Phase 1 closer. CHANGELOG entry written when Phase 7 lands. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 feat(engine): facts hot memory engine API (Phase 2) Phase 2 of v0.31 hot-memory. Adds 8 facts methods to BrainEngine implemented on both PGLite and Postgres engines: - insertFact(input, ctx) — INSERT with optional supersedeId; expires the named row in the same transaction. Per-entity advisory lock on Postgres (`pg_advisory_xact_lock(hashtextextended(source_id::text || ':' || entity_slug, 0))`) for the dedup window. PGLite is single-process so the lock is a no-op. - expireFact(id, opts) — sets expired_at + optional superseded_by. Idempotent-as-false (already-expired returns false). - listFactsByEntity / listFactsSince / listFactsBySession — list surfaces with FactListOpts filters (activeOnly, kinds, visibility, limit/offset). Every query starts WHERE source_id = $X so the trust boundary is part of the index path. - listSupersessions — audit log; activeOnly:false + expired_at IS NOT NULL + superseded_by IS NOT NULL. - findCandidateDuplicates(source_id, entity_slug, factText, k) — entity-prefiltered (mandatory), k=5 default, hard cap 20. Embedding- cosine ordering when caller supplies an embedding, recency fallback otherwise. Bounds the contradiction-classifier blast radius. - consolidateFact(id, takeId) — sets consolidated_at + consolidated_into. Never DELETE; facts stay as audit trail for the resulting take. - getFactsHealth(source_id) — per-source counters consumed by `gbrain doctor` facts_health check. Public types in engine.ts: FactKind (5-value union), FactVisibility, FactInsertStatus, FactRow, NewFact, FactListOpts, FactsHealth. PGLite + Postgres helpers: rowToFact / rowToFactPg parse the text-format pgvector embedding back into Float32Array; toPgVectorLiteral encodes for the supersede-path INSERT (postgres-js can't bind Float32Array directly to a vector column without an explicit literal cast). Smoke test confirms every method end-to-end on PGLite. Typecheck clean. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 feat(facts): extraction code path (Phase 3) Phase 3 of v0.31 hot-memory. Five new modules under src/core/facts/ + src/core/entities/: - src/core/facts/decay.ts — pure helper. effectiveConfidence(fact, now) applies confidence × exp(-age/halflife) with per-kind halflife table (event 7d, commitment 90d, preference 90d, belief 365d, fact 365d). Returns 0 for expired or past-valid_until rows. Single source of truth consumed by recall, supersession audit, facts_health, and the MCP _meta injector (eD8 DRY). - src/core/facts/queue.ts — bounded in-memory queue. Cap 100 default, drop-oldest on overflow with counter. Per-session in-flight=1 serializes burst chat. AbortSignal threading from server SIGTERM (mirrors minion worker pattern per eD7): 5s grace for in-flight, then drop pending with counter. getFactsQueue() process-singleton; __resetFactsQueueForTests for hermetic tests. - src/core/facts/classify.ts — contradiction classifier with cosine fast-path (D13: ≥0.95 → duplicate, skip LLM) and classifier-failure fallback (D12: cosine ≥0.92 → duplicate, else INSERT). Pure cosine helper exported. JSON-strict output with 4-strategy parse fallback; refusal stop-reason maps to fallback path. Caller-provided abort signal propagated to the gateway chat call. - src/core/facts/extract.ts — Haiku turn-extractor. Reuses INJECTION_PATTERNS from src/core/think/sanitize.ts on the way IN (turn_text) AND on the way OUT (each fact). Tight system prompt with 5-kind taxonomy, 0..1 confidence scoring, entity slug or display name. Anti-loop check on isDreamGenerated (reuses v0.23.2 marker semantics). Synchronous embedOne() per fact via the gateway so classifier paths have embeddings available; AbortError re-thrown explicitly so SIGTERM during embed never writes a NULL-embedding row meant to be cancelled (eE8 distinction). - src/core/entities/resolve.ts — slug canonicalization shared by signal-detector AND facts. Resolution order: exact slug match → pg_trgm fuzzy match (similarity ≥0.4) → deterministic slugify fallback. slugify exported standalone for tests + callers that want the floor. Smoke tests confirm decay table, cosine math, slugify rules, queue drop-oldest under overflow, and shutdown grace + drop-pending semantics. Typecheck clean. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 feat(mcp+cli): MCP ops + recall CLI + _meta + transport refactor (Phase 4) Phase 4 of v0.31 hot-memory. Three new MCP ops on the contract-first surface: - `extract_facts` (write scope, localOnly:false): extracts facts from a conversation turn via the Haiku extractor, runs the cosine fast-path dedup, INSERTs into per-source hot memory. Returns counts + fact_ids[]. Skips on is_dream_generated:true (anti-loop). - `recall` (read scope): query the per-source hot memory by entity / since / session / supersessions / grep filter. Visibility- aware: remote callers see visibility='world' rows only (takes-style ACL parity, eD21). Returns most-recent first; pagination via limit. - `forget_fact` (write scope): expireFact wrapper. Idempotent-as-error on unknown id; uses the new 'fact_not_found' ErrorCode. ErrorCode union opened (eD6 / eE7): TS forward-compat via the `(string & {})` autocomplete-friendly hack so downstream consumers (gbrain-evals etc) don't break their typecheck on every new code. Three new codes: 'rate_limited', 'extraction_failed', 'fact_not_found'. OperationContext gains source_id?:string (eD4 / eE2 — TEXT not INTEGER per schema reality). Resolved once in buildOperationContext from DispatchOpts.sourceId. Stdio MCP defaults to GBRAIN_SOURCE env or 'default'; HTTP MCP reads it from the per-token sources scope (eE3). ToolResult gains _meta?: Record<string, unknown> (eD3). Dispatcher calls a configurable metaHook AFTER op.handler succeeds, wrapped in its own try/catch so a DB blip degrades to no-_meta rather than flipping the whole tool call to error (eE4). New module src/core/facts/meta-hook.ts: - getBrainHotMemoryMeta(name, ctx) builds the _meta.brain_hot_memory payload. Cache key (source_id, session_id, hash(takesHoldersAllowList sorted)) (eD10 / eE5). 30s TTL per session. Visibility filter applies: remote → world only; local → all. Top-K=10 ranked by effective confidence (decay). Skips injection on recall/extract_facts/forget_fact themselves. bumpHotMemoryCache() invalidates per (source_id, session_id) on extraction event. D12 (eE1) accepted: serve-http.ts:801 inlined dispatch path REFACTORED to call dispatchToolCall. HTTP MCP now inherits source_id, _meta injection, error envelope unification, and OperationContext shape from the same code path stdio uses. Scope check + mcp_request_log + SSE broadcast stay in serve-http.ts (HTTP-specific concerns); the dispatcher returns ToolResult and the HTTP handler reads isError + content + _meta to fan into the audit + broadcast paths. put_page compliance backstop (D23): when a conversation-shape page is written (note/meeting/slack/email/calendar-event/source/writing) with a substantive body (>=80 chars) on a non-subagent slug AND no dream_generated:true marker, fire-and-forget enqueue an extraction job into the bounded queue. Never blocks the put_page response. Skipped reasons (no_parsed_page / subagent_namespace / dream_generated / kind:* / too_short / queue_shutdown / backstop_error) are stable strings consumed by tests. `gbrain recall` + `gbrain forget` CLI commands (src/commands/recall.ts): - recall <entity> | --since DUR | --session ID | --today (markdown with kind icons 📅🎯🤝💭📌) | --grep TEXT | --supersessions | --include-expired | --as-context (prompt-injection-ready) | --json - forget <fact-id> shorthand for expireFact Wired into src/cli.ts dispatch table next to takes / think. Smoke tests confirm: dispatch surfaces (extract_facts → ops → listFactsByEntity), forget_fact + idempotent re-call, _meta visibility filter (remote sees world only, local sees all), CLI markdown render with kind icons + age strings + decayed confidence. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 feat(cycle): consolidate phase — facts → takes promotion (Phase 5) Phase 5 of v0.31 hot-memory. New 10th cycle phase `consolidate` between `patterns` and `embed`: - src/core/cycle.ts: * CyclePhase union extended with 'consolidate' * ALL_PHASES gets 'consolidate' between patterns and embed (graph-fresh after patterns; embed runs after so the new takes get embedded same-cycle) * NEEDS_LOCK_PHASES gets 'consolidate' (writes takes + UPDATEs facts) * CycleReport.totals gains facts_consolidated + consolidate_takes_written * runCycle dispatches the new phase via dynamic import - src/core/cycle/phases/consolidate.ts (new): * Scans (source_id, entity_slug) buckets where COUNT(unconsolidated facts) >= 3 (uses idx_facts_unconsolidated partial index) * Skips buckets where the OLDEST fact is < 24h old (gives signal time to settle before locking it into cold memory) * Greedy cosine clustering at threshold 0.85; head-element centroid keeps it deterministic + cheap. Singletons (no embedding) stay unconsolidated this cycle. * For each cluster size >= 2: picks the highest-confidence fact's text as the take claim (v0.31 deterministic; v0.32 swaps to Sonnet synthesis pass). avg confidence → take weight, earliest valid_from → take since_date, concatenated source_sessions → take.source. * Resolves entity_slug → page_id via pages.slug (per source). Skips cluster if page is missing in this source — no auto-page-creation in v0.31. * INSERT into takes(kind='fact', holder='self') with row_num = MAX(existing) + 1. * UPDATE contributing facts: consolidated_at = now() + consolidated_into = takes.id. NEVER DELETE — facts are the audit trail for the resulting take. * dryRun honored: pretends the writes happened; counters still tick so operators can preview load before the first real run. * yieldDuringPhase keepalive between buckets so the Minions worker job lock + cycle-lock TTL don't drift on long runs. Smoke test on PGLite confirms: 4 unconsolidated facts → clustered (cosine 1.0 since same vector) → 1 take row created → all 4 facts marked consolidated_into. runCycle({phases:['consolidate']}) wires through to the report totals. Typecheck clean. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 test: 18 facts test files (Phase 6) Phase 6 of v0.31 hot-memory: comprehensive coverage across the new substrate. 110 unit tests pass; 5 E2E test files added (skip gracefully without DATABASE_URL). Unit tests (PGLite in-memory, no DATABASE_URL): - test/facts-decay.test.ts (12 cases) — HALFLIFE_DAYS pinned per kind, effectiveConfidence math: age=0 / age=halflife (~1/e) / age=2×halflife (~1/e²) / expired returns 0 / valid_until past returns 0 / preference-vs-event slower decay / belief-vs-commitment crossover. - test/facts-queue.test.ts (10 cases) — FIFO within session, drop-oldest on overflow, per-session in-flight=1 serializes, different sessions parallelize, failed jobs counter, shutdown grace + drop_pending + external AbortController triggers shutdown. - test/facts-classify.test.ts (8 cases) — cosineSimilarity edge cases, empty candidates → independent, cheap fast-path ≥0.95 → duplicate no LLM, threshold-configurable cosine_fallback path. - test/facts-engine.test.ts (13 cases) — every BrainEngine fact method end-to-end: insertFact (insert/supersede), expireFact idempotency, list*, findCandidateDuplicates entity-prefiltered + k cap + cosine ordering, consolidateFact never DELETE, getFactsHealth shape + total_today ⊆ total_week. - test/facts-multi-tenant.test.ts (6 cases) — cross-source isolation on every list method + CASCADE delete on sources. - test/facts-visibility.test.ts (6 cases) — visibility column private/ world; remote=true filters to world-only via dispatchToolCall; remote=false sees all. - test/facts-canonicality.test.ts (10 cases) — slugify rules including NFKD diacritic strip ("Crème Brûlée" → "creme-brulee"), exact slug match, fallback to slugify when no fuzzy match. - test/facts-extract.test.ts (4 cases) — empty turn returns [], dream- generated short-circuit, graceful no-API-key return. - test/facts-backstop-gating.test.ts (5 cases) — put_page backstop: too_short, subagent_namespace, dream_generated, eligible note path, non-eligible kind:guide. - test/facts-anti-loop.test.ts (4 cases) — extractor + put_page both respect dream_generated:true marker. - test/facts-doctor-shape.test.ts (4 cases) — facts_health JSON shape pinned for downstream consumers. - test/facts-mcp-allowlist.serial.test.ts (5 cases) — extract_facts write-scope, recall read-scope, forget_fact write-scope, forget_fact fact_not_found error code, extract_facts no-API-key zero counts. - test/facts-context-injection.serial.test.ts (6 cases) — _meta injection on success, world-only filter under remote=true, anti-loop on facts ops themselves, best-effort degrade on hook error, cache-key includes allow-list hash. - test/facts-separation-pglite.test.ts (2 cases) — Garry's Separation Test as primary ship gate, plus expired hidden-by-default contract. - test/facts-recall-render.test.ts (3 cases) — --today markdown render with all 5 kind icons, --json shape with effective_confidence, --as-context emits comment-wrapped block. - test/facts-migration-dim.test.ts (4 cases) — embedding column type is HALFVEC/VECTOR (not arbitrary), dim matches gateway-configured embedding_dimensions, HNSW opclass agrees with column type, idempotent re-init. - test/cycle-consolidate.test.ts (5 cases) — below-count + below-age thresholds skip, happy path 4 facts → 1 take + all consolidated never DELETE, dryRun honored, missing page → bucket skipped. E2E tests (skip gracefully on DATABASE_URL unset; required gates by CLAUDE.md test policy): - test/e2e/facts-separation-postgres.test.ts — Postgres parity for the ship gate. - test/e2e/facts-cross-source-isolation.test.ts — cross-source ACL on PG + CASCADE delete. - test/e2e/facts-forget.test.ts — full forget_fact MCP roundtrip. - test/e2e/facts-context-injection-postgres.test.ts — _meta injection end-to-end on PG. - test/e2e/facts-recall-render.test.ts — recall --today markdown on PG. - test/e2e/serve-http-meta.test.ts — eE1 regression: HTTP MCP transport inherits _meta + sourceId + scope correctness via dispatchToolCall. Side-effect: src/core/entities/resolve.ts NFKD post-decompose strips combining marks (U+0300..U+036F) before hyphenating non-alphanumerics, so "Crème" → "creme", not "cre-me-". Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 feat(operational): kill switch + doctor check + CHANGELOG + README (Phase 7) Phase 7 of v0.31 hot-memory. - src/core/facts/extract.ts: new isFactsExtractionEnabled(engine) helper reads `facts.extraction_enabled` config row. Defaults to TRUE; flip to 'false'/'0'/'no'/'off' (case-insensitive) via `gbrain config set facts.extraction_enabled false` to kill extraction across the brain without binary downgrade. - extract_facts MCP op short-circuits with zero-counts envelope + a 'skipped: extraction_disabled' field when the flag is off (clean success, not permission_denied). - put_page facts backstop respects the same flag — eligibility check now returns 'extraction_disabled' as the skipped reason. - src/commands/doctor.ts: new facts_health check (runs after queue_health, before index_audit). Probes for the facts table existence (post-v40 guard), then surfaces total_active / total_today / total_week / total_consolidated + top-3 entities for the default source. Pre-v0.31 brains report "facts table not present (pre-v0.31 brain or migration pending)". - CHANGELOG.md: full v0.31.0 entry in the GStack release-summary voice. Headline + numbers-table + what-it-ships + itemized changes + "To take advantage of v0.31" upgrade block + out-of-scope. Honest about the HALFVEC + serve-http refactor + ErrorCode-open-union complications. - README.md: cycle phase list updated 8 → 10 (consolidate + purge). New "v0.31 Hot Memory" command block under Commands with recall + forget variants, kind icons, --as-context surface for headless agents. Test gates: 28 facts unit tests pass after the kill-switch wiring + doctor check ride-along. Typecheck clean. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 fix(migrate): add facts→sources FK explicitly via ALTER TABLE The inline column-level FK declaration on facts.source_id worked on PGLite but silently got dropped on Postgres in the v0.31 e2e run — the migration handler ran via postgres-js's `unsafe()` multi-statement path and the resulting facts table came back without the `facts_source_id_fkey` constraint. Same psql input run directly against the same database produced the FK; the difference was the unsafe() pipeline, not the SQL itself. Splitting the FK into a separate ALTER TABLE inside a DO block makes the constraint declaration explicit and idempotent: the named constraint either exists or it doesn't, the ALTER is a no-op on re-runs, and the failure mode is loud rather than silently leaving a CASCADE-less foreign key behind. Without this fix, deleting a source row leaves orphaned facts rows (test/e2e/facts-cross-source-isolation.test.ts CASCADE-on-sources- delete case caught it). With this fix the constraint is in place, the cascade fires, and both PG + PGLite e2e suites stay green. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 test: update phase-count assertions for the new consolidate phase Three e2e/unit tests pinned the cycle phase count or order, all now updated to reflect v0.31's 10-phase cycle: - test/e2e/dream-cycle-eight-phase-pglite.test.ts: describe rename "8-phase cycle" → "10-phase cycle"; ALL_PHASES expectation extended to include 'consolidate' (between patterns + embed) and 'purge' (the v0.26.5 addition that was already in ALL_PHASES but missing from the test's assertion list). totals match adds the new facts_consolidated + consolidate_takes_written fields plus the pre-existing purged_sources_count + purged_pages_count that should have been added when v0.26.5 landed. - test/e2e/cycle.test.ts: dry-run full cycle now expects report.phases.length === 10 (was 9). - test/core/cycle.serial.test.ts: yieldBetweenPhases hook count + full cycle phases.length both updated 9 → 10. Comments call out the v0.31 addition lineage so the next person to add a phase sees the precedent. These are mechanical assertion bumps. The tests pass against the updated assertions on PGLite and Postgres. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 fix(test): truncate facts table between e2e describe blocks setupDB() truncates ALL_TABLES between every describe block's beforeAll() hook. The list missed the new v0.31 facts table, so facts seeded by an earlier describe block leaked into Garry's Separation Test on Postgres — listFactsByEntity('travel') returned 2 rows instead of 1 because a prior facts-context-injection test had also seeded a 'travel' fact. Adding 'facts' to the truncate list (before 'pages' to respect FK ordering) makes every describe-block start from an empty facts table. Pinned by re-running the e2e file ordering that originally caught it (facts-recall-render → cross-source-isolation → serve-http-meta → context-injection → separation-postgres → facts-forget) — 13 pass / 0 fail after the fix. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 test: meta-hook cache + Postgres consolidate phase coverage Two net-new test files filling real coverage gaps the earlier sweep missed: - test/facts-meta-cache.test.ts (5 cases) — pins the eD3/eD10 cache contract that the dispatcher relies on. 30s TTL hit path, post-bump fresh-query, scoped invalidation (bump for sess-A leaves sess-B cache warm — closes the cross-source leak risk codex F5 originally surfaced on the recall payload), facts-self ops skip injection (anti-loop on recall / extract_facts / forget_fact), distinct allow-lists produce distinct cache entries. - test/e2e/cycle-consolidate-postgres.test.ts (3 cases) — Postgres parity for the dream-cycle consolidate phase. Mirrors the PGLite unit test but exercises the real postgres-engine codepaths: sql.begin transactions, advisory locks on insertFact's entity-slug dedup window, unsafe('::vector') casts on findCandidateDuplicates ordering, addTakesBatch postgres-js unnest path. Happy path (4 facts → 1 take + all consolidated_into set), age-threshold skip, dry-run no-write. All 5 unit + 3 e2e tests pass. Closes the unit-only gap on the consolidate phase (was only PGLite-tested) and pins meta-cache invariants the dispatcher depends on. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 fix: thread auth + sourceId, JSON-shape every error envelope Three bugs surfaced during the full e2e sweep that all trace back to my v0.31 dispatch refactor (D12/eE1) silently dropping auth threading + non-OperationError exceptions emitting plain strings: 1. **HTTP MCP transport lost ctx.auth.** Refactoring serve-http.ts to call dispatchToolCall meant auth had to come through DispatchOpts, but the field didn't exist yet. Every HTTP whoami call returned `unknown_transport` because ctx.auth was undefined. Added `auth?: AuthInfo` to DispatchOpts, plumbed it through buildOperationContext, and updated serve-http.ts:816 to pass `auth: authInfo` alongside sourceId/takesHoldersAllowList. Pinned by sources-remote-mcp e2e `whoami reports oauth transport + sources_admin scope`. 2. **Non-OperationError exceptions emitted plain strings, not JSON.** The pre-v0.31 serve-http.ts always wrapped errors in JSON envelope `{error, message}`; my dispatch refactor missed the unknown-tool + uncaught-throw paths and emitted `Error: ${msg}` text content. Every caller that did `JSON.parse(content)` (sources-remote-mcp callMcp helper at line 104) crashed with `Unexpected identifier "Error"`. Both error paths in dispatchToolCall now return JSON-shaped content matching the OperationError pattern. 3. **Files→sources FK silently lost on rewound bootstrap path.** test/e2e/postgres-bootstrap.test.ts simulates a pre-v0.21 brain by `DROP TABLE IF EXISTS sources CASCADE` which removes files_source_id_fkey while leaving files.source_id intact. The v23 migration's `ALTER TABLE files ADD COLUMN IF NOT EXISTS source_id ... REFERENCES sources(id) ON DELETE CASCADE` is a no-op when the column exists, so the FK never came back on upgrade — and any sources-remove afterward stopped cascading to files. Added a defensive `IF NOT EXISTS files_source_id_fkey ... ALTER TABLE ADD CONSTRAINT` block inside v23's handler. Pinned by `multi-source — cascade delete covers every dependent row` after running postgres-bootstrap. Plus: src/core/preferences.ts now honors GBRAIN_HOME for `~/.gbrain/migrations/completed.jsonl`. Without this, the doctor exits-0 mechanical test inherits the developer machine's stale partial-migration ledger entries (0.21.0, 0.22.4, 0.28.0, 0.29.1 prior dev work) and surfaces them as the [FAIL] minions_migration check. GBRAIN_HOME-scoped tempdir per test now isolates this state cleanly. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 chore: scrub personal references from public artifacts Per the CLAUDE.md privacy rule on `Garry's Separation Test`, replace personally-coded references in v0.31 artifacts with neutral examples: - CHANGELOG.md v0.31 entry: rename "Garry's Separation Test" header to "The cross-session test" + drop the "topic-2659/topic-1941, 7 AM/2 PM, flying to Tokyo" narrative. - src/commands/migrations/v0_31_0.ts feature pitch: same scrub. - test/facts-separation-pglite.test.ts + test/e2e/facts-separation-postgres.test.ts: rename describe blocks; replace specific topic-NNNN session ids with session-A / session-B; replace personal sample fact with "sample event Tuesday". - src/core/facts/extract.ts extractor system prompt example slugs: people/sam-altman → people/alice-example; companies/anthropic → companies/acme. - src/core/entities/resolve.ts comment: Sam Altman → Alice Example. - All v0.31 test fixtures: people/sam → people/alice-example, Sam Altman → Alice Example, sam-the-cofounder → alice-the-cofounder. Test names referencing real-world entities replaced with neutral slugs. Pre-existing references to "Garry" elsewhere in CHANGELOG (v0.17, v0.19, v0.21+ entries) are untouched — that's a separate scope from this v0.31 ship. Plus: the truncate fix for the Bun-script-induced syntax error in test/e2e/mechanical.test.ts (cliEnv arrow function had ", 30_000)" tacked onto its closing brace by the bulk-add-timeouts script — repaired to a clean function definition). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 fix(test): bump E2E phase-count assertions for 11-phase cycle Two E2E tests still asserted the v0.31 pre-merge 10-phase shape (consolidate inserted, but recompute_emotional_weight from v0.29 not yet absorbed). With master's v0.29 work merged in, the cycle is now 11 phases: lint → backlinks → sync → synthesize → extract → patterns → recompute_emotional_weight → consolidate → embed → orphans → purge. - test/e2e/cycle.test.ts: 10 → 11 - test/e2e/dream-cycle-eight-phase-pglite.test.ts: ALL_PHASES + dry-run order Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 fix(merge): close brace between v44 and v45 migration objects The v0.30.2 merge resolution stitched master's v40-v44 migrations onto HEAD's v45 (facts hot memory) migration but lost the closing `},` between v44 and v45. tsc caught it as TS1136 Property assignment expected at migrate.ts:2188. This is a one-line bracket fix; the rest of the merge resolution is correct and tests pass. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 fix: put_page cliHints + buildPlan v0.31.0 in skippedFuture Two unit-test failures surfaced after the v0.30.2 merge: 1. operations.ts: put_page had `cliHints: { name: 'put', positional: ['stdin'] }` from earlier v0.31 development. The parity test enforces that every name in `positional` is a real param. Restored master's correct shape: `{ name: 'put', positional: ['slug'], stdin: 'content' }`. 2. test/apply-migrations.test.ts: the H9 regression tests pin the exact skippedFuture list. Adding v0.31.0 to the registry meant the list grew by one. Updated both `expect(...).toEqual([...])` assertions. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * v0.31 docs: clarify consolidate is 11th phase + regen llms-full.txt CHANGELOG.md narrative said "new 10th phase consolidate"; with v0.29's recompute_emotional_weight already on master, consolidate is the 11th phase (between recompute and embed). Schema migration is v45, not v40, after the merge resolution renumbered it to clear master's v40-v44. llms-full.txt regenerated to reflect the README's 11-phase dream-cycle phrasing (the build-llms test enforces commit-time parity). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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410c6978a4 |
v0.30.2 feat: dream synthesize stops dropping fat transcripts (#754)
* feat: classify Anthropic prompt-too-long as UnrecoverableError
The subagent handler now detects 400 "prompt is too long" responses
from the Anthropic SDK and rethrows as UnrecoverableError. The worker
already routes UnrecoverableError straight to `dead`, so doomed jobs
fail terminally on first attempt instead of stalling 3x with the same
oversized prompt.
isPromptTooLongError matches the production message verbatim
("prompt is too long: N tokens > N maximum"), case-insensitive, on
both the outer message and inner error.message paths. Defensive
secondary match for status=400 + invalid_request_error/request_too_large
with the words "too long"/"exceed"/"maximum".
9 unit cases pin the detection: production wording, case folding,
nested SDK shape, defensive 400 paths, unrelated 400s, transient
errors, null/empty inputs.
* feat: model-aware chunking + slug-rewrite for dream synthesize
The synthesize phase now chunks oversized transcripts at paragraph
boundaries instead of submitting one giant prompt that 400s on
Anthropic. Closes the v0.30 dream-cycle queue clog where 1.7M-token
transcripts dead-lettered after 3 stalls and re-discovered every
cycle.
D1: per-chunk budget = floor(model_context_tokens × 0.9 × 3.5).
MODEL_CONTEXT_TOKENS keys on resolved Anthropic ids (Opus 4.7 = 1M,
Sonnet 4.6 = 200K, Haiku = 200K). Non-Anthropic models fall back to
180K-token safe default with a once-per-process stderr warning.
dream.synthesize.max_prompt_tokens overrides the model lookup
(token-shaped, name from PR #748, floor 100K).
D5: on max_chunks_per_transcript cap hit, log + skip; do NOT write to
dream_verdicts. Closes the cache-poisoning class — next cycle
re-attempts under whatever budget is then current.
D6: orchestrator-side deterministic slug rewrite, zero Sonnet trust.
collectChildPutPageSlugs raw-fetches every (job_id, slug) pair (no
SELECT DISTINCT — that erased the collision evidence the audit
claimed to detect) and rewrites bare-hash6 slugs to <hash6>-c<idx>
for chunked children.
D8: pre-fan-out lookup of completed legacy `dream:synth:<filePath>:
<hash16>` jobs. Transcripts already synthesized under the
single-chunk shape skip submission with `already_synthesized_legacy_
single_chunk` instead of resubmitting under chunked keys.
D9: hash-deterministic chunk boundaries. The 3-tier ladder lifted
from PR #748 (## Topic: > --- > nearest \\n) is fed a back-half
search-window offset derived from contentHash. Same content always
chunks identically across runs; chunk N of a previously-failed
transcript produces byte-identical content on retry.
D10: 24-chunk default cap, operator-configurable via
dream.synthesize.max_chunks_per_transcript.
18 unit cases pin the chunker (boundary ladder, hash determinism,
hard fallback, slug rewrite all 7 shapes). 4 PGLite E2E cases pin
fan-out shape (single-chunk legacy key parity, multi-chunk chunked
key shape) + skip paths (D5 cap hit no verdict-cache write, D8
legacy-key skip).
Credits PR #748 (Wintermute) for the boundary ladder, config key
naming, and 3.5 chars/token estimator. This branch supersedes #748
with the structural safeguards (model-aware budget, terminal-error
classify, slug rewrite, hash-determinism, doctor surfacing).
* feat: surface dead-lettered prompt_too_long jobs in doctor queue_health
queue_health gains a 4th subcheck counting dead `subagent` jobs in
the last 24h whose error_text starts with `prompt_too_long:`. When
present, prints a fix hint pointing at
`gbrain dream --phase synthesize --dry-run --json` to identify the
fat transcripts and naming the two operator escape hatches
(`dream.synthesize.max_prompt_tokens` for budget tuning,
larger-context model for capacity).
Operators now see the chunking failure mode without grepping
minion_jobs by hand.
* chore: bump version and changelog (v0.30.2)
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: update README + CLAUDE.md for v0.30.2
- README dream help: 8-phase → 9-phase, mention v0.30.2 chunking + config keys
- CLAUDE.md synthesize.ts: chunker + per-chunk idempotency + D6 slug rewrite + D7 scope + D8 legacy-key
- CLAUDE.md subagent.ts: prompt_too_long terminal classification
- CLAUDE.md doctor.ts: queue_health subcheck 4 (dead-lettered prompt_too_long)
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* docs: regenerate llms-full.txt after v0.30.2 CLAUDE.md updates
The docs/ pass extended three Key Files entries in CLAUDE.md
(synthesize.ts, subagent.ts, doctor.ts). The auto-derived
llms-full.txt bundle picks up those CLAUDE.md changes via
build-llms; the build-llms test caught the drift in CI.
Generated by: bun run build:llms
---------
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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8392d434a9 |
v0.29.2 feat: thin-client mode (gbrain init --mcp-only + gbrain remote ping/doctor + topologies) (#732)
* feat(config): add remote_mcp field + isThinClient() helper Adds a top-level optional remote_mcp config block to GBrainConfig (issuer_url, mcp_url, oauth_client_id, oauth_client_secret) for thin-client installs that consume a remote `gbrain serve --http` over MCP instead of running a local engine. isThinClient(config) returns true when remote_mcp is set; used by the CLI dispatch guard, doctor branch, and init re-run guard. The engine field stays as today (postgres|pglite); thin-client mode is a separate config field, NOT an engine kind extension (codex outside-voice review flagged the engine='remote' extension as overreach). GBRAIN_REMOTE_CLIENT_SECRET env var overrides the config-file value at load time so the secret can stay out of disk for headless agents. Foundation commit for multi-topology v1; no behavior change yet. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(probe): outbound OAuth + MCP smoke probes Adds three pure async functions over the standard fetch API: - discoverOAuth(issuerUrl): GET /.well-known/oauth-authorization-server - mintClientCredentialsToken(tokenEndpoint, id, secret): POST /token - smokeTestMcp(mcpUrl, accessToken): POST /mcp initialize Discriminated 'ok=true' / 'ok=false + reason' return shapes so callers render error messages consistently. No SDK dependency to keep init's setup-flow scope tight; Lane B's mcp-client.ts will pull in the official @modelcontextprotocol/sdk Client for full session semantics. Used by both 'gbrain init --mcp-only' (Lane A's setup smoke) and runRemoteDoctor (Lane A's thin-client doctor checks). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(init): --mcp-only branch + re-run guard Adds 'gbrain init --mcp-only' for thin-client setup. Required flags (or env vars): --issuer-url OAuth root (e.g. https://host:3001) --mcp-url MCP tool dispatch path (e.g. https://host:3001/mcp) --oauth-client-id, --oauth-client-secret Pre-flight runs three smoke probes (discovery, token round-trip, MCP initialize) BEFORE writing the config — fail-fast on bad URL beats fail-late on bad credentials. On success, writes ~/.gbrain/config.json with remote_mcp set and NO local DB created. Re-run guard (A8): when ~/.gbrain/config.json already has remote_mcp, 'gbrain init' (any flag set) refuses without --force. Catches the scripted-setup-loop friction from the user-reported scenario where re-running setup-gbrain on a thin-client machine kept trying to re-create a local DB. Two URLs in config (issuer + mcp) instead of one because OAuth discovery + /token live at the issuer root while tool dispatch is at /mcp — they compose from a common base in practice but reverse-proxy setups need them explicit (codex review #2). Tests: 15 cases covering happy path, env-var-supplied secret stays out of disk, all four required-flag missing-error paths, three smoke-failure paths, network-unreachable path, and the four re-run guard variants (default/--pglite/--mcp-only without --force / with --force). Uses async Bun.spawn (NOT execFileSync) — sync exec deadlocks against in-process HTTP fixtures because the parent's event loop can't accept connections while sync-blocked on a child. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(doctor): runRemoteDoctor for thin-client mode Replaces every DB-bound check from runDoctor() with a tighter set scoped to 'is the remote MCP we configured actually reachable?'. Five checks: - config_integrity (URL fields well-formed) - oauth_credentials (secret resolvable from env or config file) - oauth_discovery (GET /.well-known/oauth-authorization-server) - oauth_token (POST /token client_credentials) - mcp_smoke (POST /mcp initialize) Output shape matches the local doctor's Check surface so JSON consumers can union the two without conditional logic. schema_version is 2 (matches local doctor). collectRemoteDoctorReport() is the pure data collector; runRemoteDoctor() is the print/exit wrapper. Tests pin the data collector so we don't have to intercept stdout / process.exit. Tests: 12 cases over a tiny in-process HTTP fixture covering happy path, every probe failure mode (404/parse/auth/network/server-error), malformed-URL config integrity, missing-secret short-circuit, and the env-var-overrides-config-file secret resolution. withEnv() helper used for env mutations to satisfy the test-isolation lint. Module is added but not yet wired into the CLI doctor branch; the wiring lands in the next commit (cli dispatch guard + doctor routing). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(cli): thin-client dispatch guard + doctor routing Adds a single canonical refusal at the top of handleCliOnly() for the 9 DB-bound commands when ~/.gbrain/config.json has remote_mcp set: sync, embed, extract, migrate, apply-migrations, repair-jsonb, orphans, integrity, serve Single dispatch check (not 9 sprinkled assertLocalEngine calls per codex review #1) — avoids the blast radius of letting commands enter connectEngine before the check fires. Refused commands exit 1 with a canonical error naming the remote mcp_url. doctor branch routes to runRemoteDoctor when isThinClient(config) returns true; falls through to the existing local-doctor flow otherwise. Wires the module added in the previous commit into the user-facing CLI surface. Safe commands (init, auth, --version, --help, etc.) still work in thin-client mode and are NOT in the refused set. Tests: 14 cases — 9 refused commands × 1 each, 2 safe commands, 1 doctor-routing assertion (fingerprints the thin-client output by 'mode:"thin-client"' in JSON), 2 regression tests asserting local config still passes through normally. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs(topologies): multi-topology architecture guide + setup skill Phase A.5 New docs/architecture/topologies.md covering three deployment shapes: 1. Single brain (today's default) 2. Cross-machine thin client (consume a remote brain over MCP) 3. Split-engine per-worktree (Conductor users with per-worktree code engines + shared remote artifacts brain) Each topology gets an ASCII diagram, when-it-fits guidance, and concrete setup recipes. Topology 3's alias-level routing footgun (wrong alias = silent wrong-brain writes) is called out explicitly per codex review #6. Topology 3 needs zero gbrain code changes — GBRAIN_HOME already overrides ~/.gbrain and 'gbrain serve --http --port N' already runs on any port. gstack composes these primitives on its side. skills/setup/SKILL.md gets Phase A.5 BEFORE the local-engine phases. Asks the user which topology fits, walks thin-client setup through 'gbrain init --mcp-only', skips Phases B/C/C.5/H entirely for thin clients (host's autopilot handles sync/extract/embed). README.md gets a one-line link to the topology doc from the Architecture section. llms-full.txt regenerated to include the new doc. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test(e2e): thin-client end-to-end skeleton Spins up 'gbrain serve --http' against real Postgres, registers a client with read,write,admin scope, runs 'gbrain init --mcp-only' from a separate tempdir GBRAIN_HOME, exercises the canonical thin-client flows: - init --mcp-only succeeds against the live host - doctor reports mode: thin-client + all checks green - sync is refused with the canonical thin-client error - re-running init refuses without --force Tier B flows (gbrain remote ping / doctor) will be added alongside their Lane B implementation. Skips when DATABASE_URL unset (matches the e2e gate convention used across the suite). Async Bun.spawn (NOT execFileSync) so the test event loop stays responsive — execFileSync deadlocks against in-process HTTP fixtures because the parent's event loop can't accept connections while sync-blocked on a child process. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(doctor): doctorReportRemote core for thin-client + run_doctor op Adds three new exports to src/commands/doctor.ts that the run_doctor MCP op + gbrain remote doctor CLI both consume: - DoctorReport interface schema_version=2 stable shape - computeDoctorReport(checks) status + health_score math - doctorReportRemote(engine) focused 5-check thin-client surface doctorReportRemote runs: 1. connection (engine reachable + page count via getStats) 2. schema_version (engine.getConfig('version') vs LATEST_VERSION) 3. brain_score (the 5-component composite) 4. sync_failures (file-plane JSONL count from gbrainPath('sync-failures.jsonl')) 5. queue_health (Postgres-only: stalled active jobs > 1h) Engine-agnostic: works on both Postgres and PGLite via engine.executeRaw + engine.getConfig + engine.getHealth — no reliance on db.getConnection() which is Postgres-only. Deliberately a focused subset of the local doctor surface, NOT a full mirror. Generalizing to lint/integrity/orphans is filed as follow-up pending demand. Local doctor (runDoctor) is unchanged; operators on the host machine still get the full check set. schema_version=2 matches the local doctor's --json output schema, so JSON consumers can union the two without conditional logic. Tests: 11 unit cases against PGLite covering the 5-check happy path, schema version reporting (latest), PGLite-specific queue_health informational message, and the score+status math via computeDoctorReport. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(mcp-client): outbound HTTP MCP client over @modelcontextprotocol/sdk New src/core/mcp-client.ts wraps the official SDK's Client + StreamableHTTPClientTransport with OAuth client_credentials minting, in-process token caching with expires_at, and refresh-on-401 retry. Public surface: - callRemoteTool(config, toolName, args) tool call w/ auto-refresh - unpackToolResult(res) parse content[0].text JSON - RemoteMcpError discriminated by `reason` Token cache: module-level Map keyed by mcp_url. CLI processes are short-lived; the cache amortizes when one invocation makes multiple calls (gbrain remote ping submits then polls). Persisting to disk would be a credential-on-disk surface for marginal benefit since /token round-trip is sub-100ms. 401 retry: ONLY for mid-session token rotation (initial good token → stale → 401). If the FIRST mint fails auth, surface immediately as RemoteMcpError(auth) — retry won't help when credentials are wrong from the start. If a fresh-mint-after-401 still 401s, surface as RemoteMcpError(auth_after_refresh) which the CLI renders with a hint pointing the operator at gbrain auth register-client. Used by gbrain remote ping (submit_job + get_job poll) and gbrain remote doctor (run_doctor). Test-only _clearMcpClientTokenCache export for fixture isolation. Tests: 13 unit cases over an in-process HTTP fixture mimicking gbrain serve --http (OAuth discovery + /token + /mcp JSON-RPC handshake). Covers happy path, token cache reuse + force-refresh, args passthrough, config-error paths (no remote_mcp / no secret), token mint 401, network unreachable, tool isError envelope, and unpackToolResult parse failures. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(operations): add run_doctor MCP op (admin scope, HTTP-reachable) New op in src/core/operations.ts wraps doctorReportRemote() and returns the structured DoctorReport JSON over MCP. scope: 'admin' (system-state read; not for routine consumers) localOnly: false (reachable over HTTP) mutating: false (safe to call repeatedly) params: {} (no caller arguments needed) First read-only diagnostic op exposed over HTTP MCP. Used by gbrain remote doctor — the matching client-side renderer lives in src/commands/remote.ts. Precedent: doctor only. Generalizing run_lint / run_integrity / run_orphans to MCP is filed as follow-up work pending demand. Local doctor stays unchanged; this op is the operator-friendly subset for remote callers. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(remote): gbrain remote ping + gbrain remote doctor Two thin-client convenience commands that round-trip through the host's HTTP MCP endpoint: - gbrain remote ping submit_job(autopilot-cycle) → poll get_job → exit when terminal. The "I just wrote markdown, tell the host to re-index" affordance. - gbrain remote doctor run_doctor MCP op → render the host's DoctorReport → exit 0/1 based on status. Both require a thin-client install (~/.gbrain/config.json with remote_mcp). Local installs get a clear error pointing at the local equivalents. Polling backoff (ping): 1s × 30s, then 5s × 5min, then 10s. Default cap 15min, configurable via `--timeout`. Without backoff, a 5-min cycle would burn 300 round-trips against the host's rate limiter. Payload uses `data: {phases: [...]}`, NOT `params:` — the submit_job op shape takes `data`. Codex review #8 catch. NO `repo` arg passed to autopilot-cycle — uses the server's configured brain repo. This sidesteps TODO #1144 (sync_brain repo-path validation for caller-controlled paths) entirely. src/cli.ts wires the `remote` subcommand into CLI_ONLY + the dispatch. Help (`gbrain remote --help`) and unknown-subcommand handling included. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test(e2e): thin-client Tier B + scope-mismatch regression Extends the existing test/e2e/thin-client.test.ts with three new cases: 1. gbrain remote doctor returns the host's DoctorReport — pins the run_doctor MCP op round-trip. Asserts schema_version=2, all 5 check names present, connection + schema_version ok against a fresh host. 2. gbrain remote ping triggers autopilot-cycle and returns terminal state — pins the submit_job → poll → terminal wire path. Accepts any terminal state (success / failed / dead / cancelled / timeout) because autopilot on an empty no-repo brain may fail-fast in the sync phase. What this test pins is the JSON shape (job_id present, state populated), NOT cycle success on a no-repo fixture. 3. read+write client cannot call run_doctor — codex review #7 regression guard. Registers a separate client with `--scopes "read write"` (no admin), runs `gbrain remote doctor` against it, asserts exit 1 with auth/auth_after_refresh/tool_error reason. Keeps the verification flow honest: the canonical setup MUST require admin scope. `gbrain auth register-client` doesn't have --json, so the test parses the human output for "Client ID:" and "Client Secret:" lines via a helper. Test-level timeout bumped 60s → 120s for the ping wait + auth/init overhead. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: bump version and changelog (v0.29.2) v0.29.2 ships thin-client mode: gbrain init --mcp-only, gbrain remote ping/doctor, run_doctor MCP op, and the docs/architecture/topologies.md deployment guide. Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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bca993e09f |
v0.28.12 feat: LongMemEval benchmark harness (#606)
* v0.28 schema: takes + synthesis_evidence (v31) + access_tokens.permissions (v32)
Migration v31 adds the takes table (typed/weighted/attributed claims) and
synthesis_evidence (provenance for `gbrain think` outputs). Page-scoped via
page_id FK (slug isn't unique alone in v0.18+ multi-source). HNSW partial
index on embedding for active rows. ON DELETE CASCADE on synthesis_evidence
so deleting a source take cascades the provenance row.
Migration v32 adds access_tokens.permissions JSONB with safe-default
backfill (`{"takes_holders":["world"]}`). Default keeps non-world holders
hidden from MCP-bound tokens until the operator explicitly grants access
via the v0.28 auth permissions CLI.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 engine: addTakesBatch, listTakes, searchTakes/Vector, supersede, resolve, synthesis_evidence
Extends BrainEngine with the takes domain object. Both engines implement the
same surface; PGLite uses manual `$N` placeholders, Postgres uses postgres-js
unnest() — same shape as addLinksBatch and addTimelineEntriesBatch.
Methods:
- addTakesBatch (upsert via ON CONFLICT (page_id, row_num) DO UPDATE)
- listTakes (filter by holder/kind/active/resolved, takesHoldersAllowList
for MCP-bound calls, sortBy weight/since_date/created_at)
- searchTakes / searchTakesVector (pg_trgm + cosine; honor allow-list)
- countStaleTakes / listStaleTakes (mirror countStaleChunks pattern;
embedding column intentionally omitted from listStale payload)
- updateTake (mutable fields only; throws TAKE_ROW_NOT_FOUND)
- supersedeTake (transactional: insert new at next row_num, mark old
active=false, set superseded_by; throws TAKE_RESOLVED_IMMUTABLE on
resolved bets)
- resolveTake (sets resolved_*; throws TAKE_ALREADY_RESOLVED on re-resolve;
resolution is immutable per Codex P1 #13 fold)
- addSynthesisEvidence (provenance persist; ON CONFLICT DO NOTHING)
- getTakeEmbeddings (parallel to getEmbeddingsByChunkIds)
Types live in src/core/engine.ts adjacent to LinkBatchInput. Page-scoped
via page_id (slug not unique in v0.18+ multi-source). PageType gains
'synthesis'. takeRowToTake mapper in utils.ts handles Date → ISO string
normalization.
Tests: test/takes-engine.test.ts — 16 cases against PGLite covering
upsert/list/filter/search happy paths, takesHoldersAllowList isolation,
the four invariant errors (TAKE_ROW_NOT_FOUND, TAKES_WEIGHT_CLAMPED,
TAKE_RESOLVED_IMMUTABLE, TAKE_ALREADY_RESOLVED), supersede flow, resolve
metadata round-trip, FK CASCADE on synthesis_evidence when source take
deletes. All pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 model-config: unified resolveModel with 6-tier precedence + alias resolution
Replaces every hardcoded `claude-*-X` and per-phase `dream.<phase>.model`
config key with a single resolver. Hierarchy:
1. CLI flag (--model)
2. New-key config (e.g. models.dream.synthesize)
3. Old-key config (deprecated dream.synthesize.model, dream.patterns.model)
— read with stderr deprecation warning, one-per-process
4. Global default (models.default)
5. Env var (GBRAIN_MODEL or caller-supplied)
6. Hardcoded fallback
Aliases (`opus`, `sonnet`, `haiku`, `gemini`, `gpt`) resolve at the end so
any tier can use a short name. User-defined `models.aliases.<name>` config
overrides built-ins. Cycle-safe (depth 2 break). Unknown alias passes
through unchanged so users can pass full provider IDs without registering.
When new-key + old-key are BOTH set (Codex P1 #11 fix), new-key wins and
stderr warns "deprecated config X ignored; Y is set and wins". When only
old-key is set, it's honored with a softer "rename to Y before v0.30"
warning. Both warnings emit once per (key, process) — a Set memo prevents
log spam in long-running daemons.
Migrated call sites: synthesize.ts (model + verdictModel), patterns.ts
(model). subagent.ts and search/expansion.ts to be migrated later in v0.28
(staying compatible until then).
Tests: test/model-config.test.ts — 11 cases pinning the 6-tier ordering,
alias resolution + cycle break, deprecated-key warning emit-once, and
unknown-alias pass-through. All pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 takes-fence: parser/renderer/upserter + chunker strip (privacy P0 fix)
src/core/takes-fence.ts — pure functions for the fenced markdown surface:
- parseTakesFence(body) — extracts ParsedTake[] from `<!--- gbrain:takes:begin/end -->`
blocks. Strict on canonical form, lenient on hand-edits with warnings
(TAKES_FENCE_UNBALANCED, TAKES_TABLE_MALFORMED, TAKES_ROW_NUM_COLLISION).
Strikethrough `~~claim~~` → active=false; date ranges `since → until`
split into sinceDate/untilDate.
- renderTakesFence(takes) — round-trip safe with parseTakesFence.
- upsertTakeRow(body, row) — append-only per CEO-D6 + eng-D9. Creates a
fresh `## Takes` section if no fence present. row_num is monotonic
(max + 1, never gap-filled — keeps cross-page refs and synthesis_evidence
stable forever).
- supersedeRow(body, oldRow, replacement) — strikes through old row's claim
AND appends the new row at end. Both rows preserved in markdown for
git-blame archaeology.
- stripTakesFence(body) — removes the fenced block entirely. Used by the
chunker so takes content lives ONLY in the takes table.
Codex P0 #3 fix: src/core/chunkers/recursive.ts now calls stripTakesFence()
before computing chunk boundaries. Without this, page chunks would contain
the rendered takes table and the per-token MCP allow-list would be
bypassed at the index layer (token bound to takes_holders=['world'] would
see garry's hunches via page hits). Doctor's takes_fence_chunk_leak check
(plan-side) asserts no chunk contains the begin marker.
Tests: 15 cases covering canonical parse, strikethrough, date range, fence
unbalanced detection, malformed-row skip + warning, row_num collision
detection, round-trip render, append-only upsert into existing fence,
fresh-section creation, monotonic row_num under hand-edit gaps, supersede
flow, stripTakesFence verifying takes content removed AND surrounding
prose preserved. Existing chunker tests still pass (15 + 15 = 30).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 page-lock: PID-liveness file lock for atomic markdown read-modify-write
src/core/page-lock.ts — per-page file lock at
~/.gbrain/page-locks/<sha256-of-slug>.lock so two concurrent `gbrain takes
add` calls or `takes seed --refresh` from autopilot can't race on the
same `<slug>.md` read-modify-write. Eng-review fold: reuses the v0.17
cycle.lock pattern (mtime + PID liveness) but per-slug.
Differences from cycle.ts's lock:
- SHA-256 of slug for safe filenames (slashes, unicode, etc.)
- Same-pid + fresh mtime = LIVE (cycle.ts assumes one lock per process and
reclaims same-pid; page-lock allows concurrent locks for DIFFERENT slugs
in one process). mtime expiry still rescues post-crash leftovers.
- 5-min TTL (vs cycle's 30 min — page edits are short)
- `withPageLock(slug, fn)` convenience wrapper with default 30s timeout
API:
- acquirePageLock(slug, opts) → handle | null (poll-with-timeout)
- handle.refresh() / handle.release() (idempotent — only releases if pid matches)
- withPageLock(slug, fn, opts) — acquire + run + release-in-finally
Tests: 10 cases — fresh acquire, live holder returns null, stale-mtime
reclaim, dead-PID reclaim, refresh updates timestamp, foreign-pid release
is no-op, withPageLock callback runs and releases on success/failure,
timeout-throws when held, SHA-256 filename safety for slashes/unicode.
All pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 extract-takes: dual-path phase (fs|db) + since/until_date as TEXT
src/core/cycle/extract-takes.ts — new phase that materializes the takes
table from fenced markdown blocks. Two paths mirror src/commands/extract.ts:
- extractTakesFromFs: walk *.md under repoPath, parse fences, batch upsert
- extractTakesFromDb: iterate engine.getAllSlugs(), parse each page's
compiled_truth+timeline, batch upsert (mutation-immune snapshot iteration)
Single dispatcher extractTakes(opts) routes by source. Honors:
- slugs filter for incremental re-extract (pipes from sync→extract)
- dryRun: count would-be upserts, write nothing
- rebuild: DELETE FROM takes WHERE page_id = $1 before re-insert (clean
slate when markdown is canonical and DB has drifted)
Schema fix: since_date/until_date were DATE in the original v31 migration.
Spec uses partial dates ('2017-01', '2026-04-29 → 2026-06') that Postgres
DATE rejects. Changed to TEXT in both the Postgres and PGLite blocks so
parser-rendered ranges round-trip cleanly. Loses the ability to do
date-range arithmetic in SQL, but date math on opinion timelines is
out of scope for v0.28 anyway. utils.ts dateOrNull now annotated as
v0.28 TEXT-aware.
Migration v31 has not been deployed yet (this branch is the v0.28 release
candidate), so the type swap is free. No data migration needed.
Tests: test/extract-takes.test.ts — 5 cases against PGLite covering full
walk + fence-skip on no-fence pages, takes-table populated post-extract,
incremental slugs filter, dry-run no-write, rebuild=true clears + re-inserts
ad-hoc rows. test/takes-engine.test.ts (16), test/takes-fence.test.ts (15)
all still pass — 36/36 takes tests green.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 takes CLI: list, search, add, update, supersede, resolve
src/commands/takes.ts — surfaces the engine methods + takes-fence library
through a single `gbrain takes <subcommand>` entrypoint:
takes <slug> list with filters + sort
takes search "<query>" pg_trgm keyword search across all takes
takes add <slug> --claim ... ... append (markdown + DB, atomic via lock)
takes update <slug> --row N ... mutable-fields update (markdown + DB)
takes supersede <slug> --row N ... strikethrough old + append new
takes resolve <slug> --row N --outcome record bet resolution (immutable)
Markdown is canonical. Every mutate command:
1. acquires the per-page file lock (withPageLock)
2. re-reads the .md file
3. applies the edit via takes-fence (upsertTakeRow / supersedeRow)
4. writes the .md file back
5. mirrors to the DB via the engine method
6. releases the lock (auto via finally)
Resolve currently writes only to DB — surfacing resolved_* in the markdown
table is deferred to v0.29 (the takes-fence renderer's column set is
fixed at # | claim | kind | who | weight | since | source per spec).
Wired into src/cli.ts dispatch + CLI_ONLY allowlist. Help text follows the
project convention (orphans/embed/extract pattern). --dir flag overrides
sync.repo_path config when working outside the configured brain.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 MCP + auth: takes_list / takes_search / think ops + per-token allow-list
OperationContext gains takesHoldersAllowList — server-side filter for
takes.holder field threaded from access_tokens.permissions through dispatch
into the engine SQL. Closes Codex P0 #3 at the dispatch layer (chunker
strip already closed the page-content side in the previous commit).
src/core/operations.ts — three new ops:
- takes_list: lists takes with holder/kind/active/resolved filters; honors
ctx.takesHoldersAllowList for MCP-bound calls
- takes_search: pg_trgm keyword search; honors allow-list
- think: op surface registered (returns not_implemented envelope until
Lane D's pipeline lands). Remote callers cannot save/take per Codex P1 #7.
src/mcp/dispatch.ts — DispatchOpts.takesHoldersAllowList threads into
buildOperationContext.
src/mcp/http-transport.ts — validateToken now reads
access_tokens.permissions.takes_holders, defaults to ['world'] when the
column is absent or malformed (default-deny on private hunches).
auth.takesHoldersAllowList passed to dispatchToolCall.
src/mcp/server.ts (stdio) — defaults to takesHoldersAllowList: ['world']
since stdio has no per-token auth. Operators wanting full visibility use
`gbrain call <op>` directly (sets remote=false).
src/commands/auth.ts — `gbrain auth create <name> --takes-holders w,g,b`
flag persists the per-token list; new `auth permissions <name>
set-takes-holders <list>` updates an existing token.
Tests: test/takes-mcp-allowlist.test.ts — 8 cases against PGLite proving
the threading: local-CLI sees all holders, ['world'] returns only public,
['world','garry'] returns 2/3, no-overlap returns empty (no fallback),
search honors allow-list, remote save/take on think rejected with
not_implemented envelope.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28.0: ship-prep — VERSION, CHANGELOG, migration orchestrator, skill
Closes the v0.28 ship-prep cycle. Bumps VERSION + package.json + bun.lock
to 0.28.0. v0_28_0 migration orchestrator runs three idempotent phases on
upgrade:
- Schema verify: asserts schema_version >= 32 (migrations v31 + v32 already
applied by the schema runner during gbrain upgrade); fails clean if not.
- Backfill takes: inline runs `extractTakes(engine, { source: 'db' })` so
any pre-existing fenced takes tables in markdown populate the takes
index. Idempotent; ON CONFLICT DO UPDATE keeps the table in sync.
- Re-chunk TODO: queues a pending-host-work entry asking the host agent
to re-import pages with takes content so the v0.28 chunker-strip rule
(Codex P0 #3 fix) applies retroactively. Pages imported under v0.28+
already have takes content stripped from chunks at index time; this
TODO catches up legacy pages.
skills/migrations/v0.28.0.md — agent-readable upgrade guide. Walks
through doctor verification, deprecated-key migration, MCP token
visibility configuration, and a "try the takes layer" smoke test.
CHANGELOG.md — v0.28.0 release-summary in the GStack voice (no AI
vocabulary, no em dashes, real numbers from git diff stat) + the
mandatory "To take advantage of v0.28.0" block + itemized changes by
subsystem (schema, engine, markdown surface, model config, MCP+auth,
CLI, tests, accepted risks).
Final test sweep: 65/65 v0.28 tests pass across 6 files. typecheck clean.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 think pipeline: gather → sanitize → synthesize → cite-render → CLI
src/core/think/sanitize.ts — prompt-injection defense for take claims:
14 jailbreak patterns (ignore-prior, role-jailbreak, close-take tag,
DAN, system-prompt overrides, eval-shell hooks) plus structural framing
(takes wrapped in <take id="..."> tags the model is told to treat as
DATA). Length-cap at 500 chars. Renders evidence blocks for the prompt.
src/core/think/prompt.ts — system prompt + structured-output schema.
Hard rules: cite every claim, mark hunches/low-weight explicitly,
surface conflicts (never silently pick), surface gaps. JSON schema
with answer + citations[] + gaps[]. Prompt adapts to anchor / time
window / save flag.
src/core/think/cite-render.ts — structured citations + regex fallback
(Codex P1 #4 fold). normalizeStructuredCitations validates the model's
structured output; parseInlineCitations is the body-scan fallback when
the model omits the structured field. resolveCitations dispatches and
records CITATIONS_REGEX_FALLBACK warning when used.
src/core/think/gather.ts — 4-stream parallel retrieval:
1. hybridSearch (pages, existing primitive)
2. searchTakes (keyword, pg_trgm)
3. searchTakesVector (vector, when embedQuestion fn supplied)
4. traversePaths (graph, when --anchor set)
RRF fusion (k=60). Each stream wrapped in try/catch — partial gather
beats no synthesis. Honors takesHoldersAllowList for MCP-bound calls.
src/core/think/index.ts — runThink orchestrator + persistSynthesis:
INTENT (regex classify) → GATHER → render evidence blocks → resolveModel
('models.think' → 'models.default' → GBRAIN_MODEL → opus) → LLM call
(injectable client) → JSON parse with code-fence + fallback strip →
resolveCitations → ThinkResult. persistSynthesis writes a synthesis
page + synthesis_evidence rows (page_id resolved per slug; page-level
citations skip evidence). Degrades gracefully without ANTHROPIC_API_KEY.
Round-loop scaffolding in place (rounds=1 only path exercised in v0.28).
src/commands/think.ts — `gbrain think "<question>"` CLI. Flag parsing
strips --anchor, --rounds, --save, --take, --model, --since, --until,
--json. Local CLI = remote=false, so save/take honored. Human-readable
output by default; --json for agent consumption.
operations.ts — `think` op now calls runThink (was a not_implemented
stub). Remote callers can't save/take per Codex P1 #7. Returns full
ThinkResult plus saved_slug + evidence_inserted.
cli.ts — wired into dispatch + CLI_ONLY allowlist.
Tests: test/think-pipeline.test.ts — 18 cases against PGLite covering
sanitize patterns, structural rendering, citation parsing (structured +
regex fallback + dedup + invalid-slug rejection), gather streams +
allow-list filter, full pipeline with stub client, malformed-LLM
fallback path, no-API-key graceful degradation, persistSynthesis writes
page + evidence rows. All pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 dream phases: auto-think + drift + budget meter (Codex P1 #10 fold)
src/core/anthropic-pricing.ts — USD/1M-tokens map for Claude 4.7 family
plus older aliases. estimateMaxCostUsd returns null on unpriced models so
the meter caller can warn-once and bypass the gate.
src/core/cycle/budget-meter.ts — cumulative cost ledger. Each submit
estimates max-cost from (model + estimatedInputTokens + maxOutputTokens),
accumulates per-cycle, refuses next submit when projected > cap. Codex
P1 #10 fold: non-Anthropic models (gemini, gpt) bypass with one stderr
warn per process and `unpriced=true` on the result. Budget=0 disables
the gate. Audit trail at ~/.gbrain/audit/dream-budget-YYYY-Www.jsonl.
src/core/cycle/auto-think.ts — auto_think dream phase. Reads
dream.auto_think.{enabled,questions,max_per_cycle,budget,cooldown_days,
auto_commit}. Iterates configured questions through runThink with the
BudgetMeter pre-checking each submit. Cooldown timestamp written ONLY on
success (matches v0.23 synthesize pattern — retries after partial
failures pick back up). When auto_commit=true, persists synthesis pages
via persistSynthesis. Default-disabled.
src/core/cycle/drift.ts — drift dream phase scaffold. Reads
dream.drift.{enabled,lookback_days,budget,auto_update}. Surfaces takes
in the soft band (weight 0.3-0.85, unresolved) that have recent timeline
evidence on the same page. v0.28 ships the orchestration; the LLM judge
that proposes weight adjustments lands in v0.29. modelId + meter wired
now so the ledger captures gate state for callers that opt in.
Tests:
- test/budget-meter.test.ts (7 cases) — pricing-map coverage, allow path,
cumulative-deny, budget=0 disabled, unpriced bypass+warn-once, ledger
captures all events, ISO-week filename branch.
- test/auto-think-phase.test.ts (9 cases) — auto_think enable/skip,
questions empty, success → cooldown ts written, cooldown blocks rerun,
budget exhausted → partial. drift not_enabled, soft-band candidate
detection, complete + dry-run paths.
All pass. Typecheck clean.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 e2e Postgres: takes engine + extract + MCP allow-list (12 cases)
test/e2e/takes-postgres.test.ts — full v0.28 takes pipeline against real
Postgres (gated on DATABASE_URL). 12 cases:
- addTakesBatch upsert via unnest() bind path (Postgres-specific)
- listTakes filters: holder, kind, sort=weight, takesHoldersAllowList
- searchTakes pg_trgm + allow-list filter
- supersedeTake transactional path (BEGIN/COMMIT semantics)
- resolveTake immutability — second resolve throws TAKE_ALREADY_RESOLVED
- synthesis_evidence FK CASCADE on take delete
- countStaleTakes + listStaleTakes filter active+null
- extractTakesFromDb populates takes from fenced markdown
- MCP dispatch with takesHoldersAllowList=['world'] returns only world
- MCP dispatch local-CLI path returns all holders
- MCP dispatch takes_search honors allow-list
- think op forces remote_persisted_blocked even for save+take
postgres-engine.ts: addTakesBatch boolean[] serialization fix.
postgres-js auto-detects element type from JS arrays; for booleans it
mis-detects as scalar. Cast through text[] (`'true' | 'false'`) then
SQL-cast to boolean[] — same pattern other batch methods rely on for
type-stable bind shapes.
test/e2e/helpers.ts: setupDB now (a) tolerates non-existent tables in
TRUNCATE (for fresh DBs where v31 hasn't yet created takes/synthesis_evidence)
and (b) calls engine.initSchema() to actually run migrations.
test/takes-mcp-allowlist.test.ts: updated 2 think-op cases to match
Lane D's landed pipeline. They previously asserted not_implemented
envelopes; now they assert remote_persisted_blocked + NO_ANTHROPIC_API_KEY
graceful-degrade behavior.
Run: DATABASE_URL=postgres://localhost:5435/gbrain_test bun test test/e2e/takes-postgres.test.ts
Result: 12/12 pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 dream phases: local DreamPhaseResult type (avoid premature CyclePhase enum extension)
cycle.ts's PhaseResult is shaped {phase, status, summary, details} with a
narrow PhaseStatus enum ('ok'|'warn'|'fail'|'skipped') and CyclePhase enum
that doesn't yet include 'auto_think'/'drift'. The phases ship standalone
in v0.28 (cycle.ts dispatcher integration is v0.28.x); using PhaseResult
forced premature enum extension.
Introduces DreamPhaseResult exported from auto-think.ts:
{ name: 'auto_think'|'drift'; status: 'complete'|'partial'|'failed'|'skipped';
detail: string; totals?: Record<string,number>; duration_ms: number }
drift.ts re-exports the same type. When v0.28.x wires the dispatcher, the
adapter at the call site can map DreamPhaseResult → PhaseResult cleanly.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 e2e: access_tokens.permissions JSONB end-to-end (5 cases)
test/e2e/auth-permissions.test.ts — closes the v0.28 token-allow-list
verification loop against real Postgres. Exercises:
- Migration v32 default backfill: new tokens created without a permissions
column get {takes_holders: ["world"]} via the schema DEFAULT clause.
- Explicit ["world","garry"] → dispatch.takes_list filters to those
holders only; brain hunches stay hidden from this token.
- ["world"] default-deny token → takes_search hits filtered to public claims.
- {} permissions row (operator tampered) gracefully defaults to ["world"]
via the HTTP transport's validateToken parsing.
- revoked_at IS NOT NULL → token excluded from active token query.
Avoids the postgres-js JSONB double-encode trap (CLAUDE.md memory): pass
the object directly to executeRaw, no JSON.stringify, no ::jsonb cast.
All 5 pass against pgvector/pgvector:pg16 on port 5435. Combined v0.28
test sweep: 116/116 across 11 files.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 e2e: chunker takes-strip integration test (Codex P0 #3 verification)
test/e2e/chunker-takes-strip.test.ts — verifies the chunker actually
strips fenced takes content end-to-end through the import pipeline.
This is the Codex P0 #3 fix's verification path: takes content lives
ONLY in the takes table for retrieval, never duplicated in
content_chunks where the per-token MCP allow-list cannot reach.
5 cases:
- chunkText (unit) output never contains TAKES_FENCE_BEGIN/END markers
- chunkText output never contains fenced claim text
- chunkText output retains non-fence prose (no over-stripping)
- importFromContent end-to-end: imported page has chunks but none
contain fenced content
- takes_fence_chunk_leak doctor invariant: zero rows globally where
chunk_text matches `<!--- gbrain:takes:%`
Final v0.28 test sweep:
121 pass, 0 fail, 336 expect() calls, 12 files
Coverage: schema migrations, engine methods (PGLite + Postgres),
takes-fence parser, page-lock, extract phase, takes CLI engine
surface, model config 6-tier resolver, MCP+auth allow-list,
think pipeline (gather + sanitize + cite-render + synthesize),
auto-think + drift + budget meter, JSONB end-to-end, chunker
strip integration. ~95% of v0.28 surface area covered.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix CI: apply-migrations skippedFuture arrays + http-transport SQL mock
Two CI failures from PR #563:
test/apply-migrations.test.ts (2 fails) — `buildPlan` tests assert exact
skippedFuture arrays at fixed installed-version stamps. Adding v0.28.0 to
the migration registry means it shows up in skippedFuture when the test
runs at installed=0.11.1 / installed=0.12.0. Append '0.28.0' to both
hardcoded arrays.
test/http-transport.test.ts (8 fails) — the FakeEngine mock string-prefix
matches `SELECT id, name FROM access_tokens` to return a row. v0.28's
validateToken now selects `SELECT id, name, permissions FROM access_tokens`
to read the per-token takes_holders allow-list. Mock returned [] on the
new query → validateToken treated every token as invalid → 401.
Fix: mock now matches both query shapes. validTokens row gets a default
`{takes_holders: ['world']}` permission injected when caller didn't
supply one (mirrors the migration v33 column DEFAULT). Updated
FakeEngineConfig type to allow tests to pass explicit permissions.
Verification:
bun test test/apply-migrations.test.ts → 18/18 pass
bun test test/http-transport.test.ts → 24/24 pass
bun run typecheck → clean
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix CI: add scope annotations to v0.28 ops (takes_list/takes_search/think)
test/oauth.test.ts enforces an invariant from master's v0.26 OAuth landing:
every Operation must have `scope: 'read' | 'write' | 'admin'`, and any op
flagged `mutating: true` must be 'write' or 'admin'. My v0.28 ops were added
before master shipped v0.26 + the new invariant; the merge surfaced the gap.
Annotations:
- takes_list → read
- takes_search → read
- think → write (mutating: true; --save persists synthesis page)
Verification:
bun test test/oauth.test.ts → 42/42 pass
bun run typecheck → clean
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore(v0.28.1): export INJECTION_PATTERNS for shared sanitization
The same pattern set protects takes from prompt-injection (think/sanitize.ts)
and now retrieved chat content in the LongMemEval harness. One source of
truth for both surfaces; adding a new pattern in this file automatically
covers benchmarks too.
Existing consumers (sanitizeTakeForPrompt, renderTakesBlock) keep working
unchanged. Verified via test/think-pipeline.test.ts (18 pass, 0 fail).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(v0.28.1): longmemeval harness — reset-in-place over in-memory PGLite
One in-memory PGLiteEngine per benchmark run; TRUNCATE between questions
with runtime-enumerated tables via pg_tables so future schema migrations
don't silently leak across questions. Infrastructure tables (sources,
config, gbrain_cycle_locks, subagent_rate_leases) preserved across resets
so initSchema-seeded rows like sources.'default' survive (FK target for
pages.source_id).
Files:
- src/eval/longmemeval/harness.ts: createBenchmarkBrain + resetTables +
withBenchmarkBrain. ~50 lines, no class wrapper.
- src/eval/longmemeval/adapter.ts: pure haystackToPages() converter.
Slug prefix `chat/` (verified non-matching against DEFAULT_SOURCE_BOOSTS).
- src/eval/longmemeval/sanitize.ts: re-uses INJECTION_PATTERNS from
think/sanitize.ts; wraps each session in <chat_session id date> tags;
4000-char cap.
- test/longmemeval-sanitize.test.ts: 12 cases pinning the F8 contract.
Hermetic: no DATABASE_URL, no API keys.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(v0.28.1): gbrain eval longmemeval CLI command
Run the LongMemEval public benchmark against gbrain's hybrid retrieval.
Dataset is a positional path (download from xiaowu0162/longmemeval on HF).
Per-question loop wraps everything in try/catch; one bad question doesn't
kill the run, error JSONL line emitted instead.
Wiring:
- src/cli.ts: pre-dispatch bypass for `eval longmemeval` so the user's
~/.gbrain brain is never opened. Hermeticity gate verified: --help works
on machines with no gbrain config.
- src/commands/eval-longmemeval.ts: arg parsing, JSONL emit (LF + UTF-8
pinned), hybridSearch with optional expandQuery from search/expansion.ts,
resolveModel from model-config.ts (6-tier chain), ThinkLLMClient injection
seam from think/index.ts, structural <chat_session> framing.
- test/eval-longmemeval.test.ts: 12 cases covering harness lifecycle,
reset clears all tables, schema-migration robustness, p50/p99 speed gate
(warm reset+import+search target <500ms), adapter shape, source-boost
regression guard, end-to-end with stubbed LLM, JSONL format guard,
per-question failure handling.
- test/fixtures/longmemeval-mini.jsonl: 5 hand-authored questions with
keyword-friendly overlap so --keyword-only works in CI.
Speed: warm reset+import 5 pages+search p50=25.9ms p99=30.3ms locally.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore(v0.28.1): bump VERSION + CHANGELOG
VERSION + package.json synchronized at 0.28.1. CHANGELOG entry uses the
release-summary voice + "To take advantage of v0.28.1" block per CLAUDE.md.
Sequential release on garrytan/v0.28-release; lands after v0.28.0.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: surface v0.28.1 LongMemEval CLI across project docs
- README.md: add EVAL section to Commands reference (eval --qrels, export,
prune, replay, longmemeval); add v0.28.1 announce paragraph next to the
v0.25.0 BrainBench-Real intro.
- CLAUDE.md: add Key files entry for src/eval/longmemeval/ +
src/commands/eval-longmemeval.ts; add "Key commands added in v0.28.1"
subsection (mirrors the v0.26.5 / v0.25.0 pattern); inventory
test/eval-longmemeval.test.ts + test/longmemeval-sanitize.test.ts under
the unit-test list.
- docs/eval-bench.md: cross-link from the "What it actually does" section
to LongMemEval as the third evaluation axis (public benchmark,
ground-truth labels, full QA pipeline); append "Public benchmarks:
LongMemEval (v0.28.1)" section with architecture, flags table, and
perf numbers.
- CONTRIBUTING.md: append a paragraph after the eval-replay block pointing
contributors at gbrain eval longmemeval for public-benchmark coverage.
- AGENTS.md: extend the existing eval-retrieval bullet with a one-line
mention of gbrain eval longmemeval.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28.2 feat: remote-source MCP + scope hierarchy + whoami (#690)
* refactor(core): extract SSRF helpers from integrations.ts to core/url-safety.ts
src/core/git-remote.ts (next commit) needs isInternalUrl etc. but importing
from src/commands/ would invert the layering boundary (no existing
src/core/ file imports from src/commands/). Extract the SSRF helpers
(parseOctet, hostnameToOctets, isPrivateIpv4, isInternalUrl) into a new
src/core/url-safety.ts and have integrations.ts re-export for backward
compat. test/integrations.test.ts continues to pass without changes (110
existing tests, 214 expects).
Why this matters for v0.28: the upcoming sources --url feature reuses
this SSRF gate for git-clone URL validation. Codex review caught that
re-rolling weaker URL classification would regress on the IPv6/v4-mapped/
metadata/CGNAT bypass forms that integrations.ts already handles.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(core): add git-remote module — SSRF-defensive clone/pull + state probe
New src/core/git-remote.ts (~210 lines) for v0.28's remote-source feature:
- GIT_SSRF_FLAGS exported const: -c http.followRedirects=false,
-c protocol.file.allow=never, -c protocol.ext.allow=never,
--no-recurse-submodules. Single source of truth shared by cloneRepo
and pullRepo so a future flag added to one path lands on both.
Closes the SSRF surfaces codex flagged: DNS rebinding via redirects,
.gitmodules as a second-fetch surface, file:// scheme in remotes.
- parseRemoteUrl: https-only, rejects embedded credentials and path
traversal, delegates internal-target classification to isInternalUrl
from url-safety.ts (covers RFC1918, link-local, loopback, IPv6, CGNAT
100.64/10, metadata hostnames, hex/octal/single-int bypass forms).
GBRAIN_ALLOW_PRIVATE_REMOTES=1 escape hatch with stderr warning is
needed for self-hosted git over Tailscale (CGNAT trips the gate).
- cloneRepo: --depth=1 default (full clone via depth: 0); refuses
non-empty destDirs; spawns git via execFileSync (no shell injection)
with GIT_TERMINAL_PROMPT=0 + askpass=/bin/false to prevent credential
prompts. timeoutMs default 600s.
- pullRepo: -C path + GIT_SSRF_FLAGS + pull --ff-only, same env confine.
- validateRepoState: 6-state decision tree (missing | not-a-dir |
no-git | corrupted | url-drift | healthy). Used by performSync's
re-clone branch to recover from rmd clone dirs and refuse syncs on
url-drift or corruption.
test/git-remote.test.ts (304 lines, 32 tests): GIT_SSRF_FLAGS exact
shape, all parseRemoteUrl rejection cases including dedicated CGNAT
100.64/10 with/without GBRAIN_ALLOW_PRIVATE_REMOTES (codex T3 case),
fake-git harness for argv assertions on cloneRepo/pullRepo, all 6
validateRepoState branches.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(core): add scope hierarchy + ALLOWED_SCOPES allowlist
New src/core/scope.ts (~120 lines) for v0.28's scoped MCP feature.
Hierarchy:
- admin implies all (escape hatch)
- write implies read
- sources_admin and users_admin are siblings (different axes —
sources-mgmt vs user-account-mgmt; neither implies the other)
Exported:
- hasScope(grantedScopes, requiredScope): the canonical scope check.
Replaces exact-string-match at three call sites in upcoming commits
(serve-http.ts:673, oauth-provider.ts:365 F3 refresh, oauth-provider.ts:498
token issuance). Without this rewrite, an admin-grant token would
fail to refresh down to sources_admin (codex finding).
- ALLOWED_SCOPES set + ALLOWED_SCOPES_LIST sorted array (deterministic
for OAuth metadata wire format and drift-check output).
- assertAllowedScopes / InvalidScopeError: registration-time gate so
tokens with bogus scope strings (read flying-unicorn) get rejected
with RFC 6749 §5.2 invalid_scope at auth.ts:296 + DCR /register +
registerClientManual. Today's behavior accepts any string silently.
- parseScopeString: space-separated wire format → array.
Forward-compat: hasScope ignores unknown granted scopes rather than
throwing, so pre-allowlist tokens with weird scope strings continue
working without crashes (registration is the gate, runtime is best-effort).
test/scope.test.ts (178 lines, 35 tests): hierarchy table including
all-implies for admin, sibling non-implication of *_admin scopes,
write→read but not the reverse, F3 refresh-token subset semantics
under hasScope, ALLOWED_SCOPES_LIST sorted-pinning, allowlist
rejection cases, parseScopeString edge cases (undefined/null/empty).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* build(admin): scope-constants mirror + drift CI for src/core/scope.ts
The admin React SPA's tsconfig.json scopes include: ['src'] to admin/src/,
so it cannot directly import ../../src/core/scope.ts. The plan considered
widening the include or generating a single source of truth; both options
either couple the SPA to the gbrain monorepo or add a build step. Eng
review picked the boring choice: hand-maintained mirror at
admin/src/lib/scope-constants.ts plus a CI drift check.
Files:
- admin/src/lib/scope-constants.ts: hand-maintained ALLOWED_SCOPES_LIST
duplicate, sorted alphabetically to match src/core/scope.ts.
- scripts/check-admin-scope-drift.sh: extracts the list from each file
via awk, normalizes via tr/sort, diffs. Exits 0 on match, 1 on drift
(with full breakdown of which scopes diverged), 2 on internal error.
Tested both passing and corrupted paths.
- package.json: wires check:admin-scope-drift into both `verify` and
`check:all` so any update to src/core/scope.ts that forgets the
admin-side mirror fails the build.
The Agents.tsx scope-checkbox sites (5 hardcoded locations) get updated
in a later commit to import from this constants file.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(oauth): hasScope hierarchy + ALLOWED_SCOPES allowlist at registration
Switch three call sites in oauth-provider.ts from exact-string-match to
hasScope() so the v0.28 sources_admin and users_admin scopes — and the
admin-implies-all + write-implies-read hierarchy in src/core/scope.ts —
work end to end:
- F3 refresh-token subset enforcement at line 365: previously rejected
admin → sources_admin refresh because exact-match treated them as
unrelated scopes. gstack /setup-gbrain Path 4 needs admin tokens to
refresh down to least-privilege sources_admin scope; this fix lands
that path.
- Token issuance intersection at line 498 (client_credentials grant):
same hasScope swap so a client whose stored grant is `admin` can mint
tokens including any implied scope.
- registerClient (DCR /register) and registerClientManual: validate
every scope string against ALLOWED_SCOPES via assertAllowedScopes.
Pre-fix the system silently accepted `--scopes "read flying-unicorn"`
and persisted the bogus string in oauth_clients.scope. Post-fix the
caller gets RFC 6749 §5.2 invalid_scope. Existing rows with
pre-allowlist scopes keep working (allowlist gates registration only).
Tests amended in test/oauth.test.ts:
- T1 (eng-review): admin grant CAN refresh down to sources_admin
- T1 sibling: write grant CANNOT refresh up to sources_admin
- ALLOWED_SCOPES allowlist coverage (manual + DCR paths, all 5 valid)
- Scope-annotation contract tests widened to accept the v0.28 union
62 OAuth tests pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(serve-http): hasScope at /mcp + advertise full ALLOWED_SCOPES
Two changes against src/commands/serve-http.ts:
- Line 195: scopesSupported on the mcpAuthRouter options switches from the
hardcoded ['read','write','admin'] to Array.from(ALLOWED_SCOPES_LIST).
Without this, /.well-known/oauth-authorization-server keeps reporting
the old triple, so MCP clients (Claude Desktop, ChatGPT, Perplexity)
cannot discover the v0.28 sources_admin and users_admin scopes via
standard discovery — they would have to be pre-configured out of band.
- Line 673: request-time scope check on /mcp swaps
authInfo.scopes.includes(requiredScope) for hasScope(...). This was
the most-cited codex finding: without it, sources_admin tokens could
not even satisfy a `read`-scoped op (sources_admin doesn't include
the literal string "read"). hasScope routes through the hierarchy
table in src/core/scope.ts so admin implies all and write implies
read at the gate too.
T2 amendment in test/e2e/serve-http-oauth.test.ts: assert
/.well-known/oauth-authorization-server includes all 5 scopes in
scopes_supported. Pre-v0.28 the list was hardcoded to ['read','write',
'admin'] and this assertion would have failed. (The test is
Postgres-gated; runs under bun run test:e2e with DATABASE_URL set.)
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(core): sources-ops module — atomic clone + symlink-safe cleanup
src/core/sources-ops.ts (~470 lines): pure async functions extracted from
src/commands/sources.ts so the CLI handlers and the new MCP ops share
one implementation.
addSource: D3 atomicity contract from the eng review.
1. Validate id (matches existing SOURCE_ID_RE).
2. Q4 pre-flight SELECT — fail loudly with structured `source_id_taken`
before any clone work. Pre-fix the existing CLI used INSERT…ON
CONFLICT DO NOTHING which silently no-op'd; with clone-first that
would orphan the temp dir.
3. parseRemoteUrl gate (delegates to isInternalUrl from url-safety.ts).
4. Clone into $GBRAIN_HOME/clones/.tmp/<id>-<rand>/ via the new
git-remote helpers.
5. INSERT row with local_path=<final clone dir>, config.remote_url=<url>.
6. fs.renameSync(tmp/, final/). Rollback on either-side failure unlinks
the temp dir; rename-failed path also DELETEs the just-INSERTed row
best-effort.
removeSource: clone-cleanup with realpath+lstat confinement matching
validateUploadPath() shape at src/core/operations.ts:61. String startsWith
is symlink-unsafe and would let $GBRAIN_HOME/clones/<id> → /etc resolve
out of the confine. Two defenses layered:
- isPathContained (realpath-resolves both sides + parent-with-sep
string check) rejects symlinks whose target falls outside the
confine.
- lstat-then-isSymbolicLink check refuses symlinks whose realpath
happens to land back inside the confine (defense in depth).
getSourceStatus: returns clone_state via validateRepoState (the 6-state
decision tree from git-remote.ts). Lets a remote MCP caller diagnose
"healthy | missing | not-a-dir | no-git | url-drift | corrupted" without
SSH access to the brain host. listSources additionally exposes
remote_url so callers can see which sources are auto-managed.
recloneIfMissing: T4 follow-up for `gbrain sources restore` after the
clone dir was autopurged — re-clones via the same temp + rename
atomicity contract. Idempotent (returns false when clone is already
healthy).
test/sources-ops.test.ts (~470 lines, 24 tests): pre-flight collision
(Q4), happy paths for both --path and --url, all four D3 rollback paths
(clone-fail before INSERT, INSERT-fail after clone, rename-fail
post-INSERT, atomic temp-dir cleanup), symlink-target-OUTSIDE-clones
(realpath confinement), symlink-target-INSIDE-clones (lstat-check),
removeSource refuses to delete user-supplied paths, refuses "default"
source, getSourceStatus clone_state branches, T4 recloneIfMissing
recovery + idempotent + no-op for path-only sources, isPathContained
unit tests covering subtree / outside / symlink-escape / fail-closed.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(operations): whoami + sources_{add,list,remove,status} MCP ops
Five new ops in src/core/operations.ts auto-flow through src/mcp/tool-defs.ts
so MCP clients (Claude Desktop, ChatGPT, Perplexity, OpenClaw) get them via
standard tools/list discovery — no SDK or transport code changes needed.
Operation.scope union widened to add 'sources_admin' and 'users_admin' (the
v0.28 hierarchy from src/core/scope.ts).
whoami (scope: read): introspect calling identity over MCP.
- Returns `{transport: 'oauth', client_id, client_name, scopes, expires_at}`
for OAuth clients (clientId starts with gbrain_cl_).
- Returns `{transport: 'legacy', token_name, scopes, expires_at: null}`
for grandfathered access_tokens.
- Returns `{transport: 'local', scopes: []}` when ctx.remote === false.
Empty scopes (NOT ['read','write','admin']) is the D2 decision —
returning OAuth-shaped scopes for local callers would resurrect the
v0.26.9 footgun where code conditionally trusted on
`auth.scopes.includes('admin')` instead of `ctx.remote === false`.
- Q3 fail-closed: throws unknown_transport when remote=true AND auth is
missing OR ctx.remote is the literal `undefined` (cast bypass guard).
A future transport that forgets to thread auth doesn't get a free
pass.
sources_add (sources_admin, mutating): register a source by --path
(existing v0.17 behavior) or --url (v0.28 federated remote-clone path).
Calls into addSource from sources-ops.ts which owns the temp-dir +
rename atomicity.
sources_list (read): list registered sources with page counts, federated
flag, and remote_url. The remote_url field is new — lets a remote MCP
caller see which sources are auto-managed.
sources_remove (sources_admin, mutating): cascade-delete a source +
symlink-safe clone cleanup. Requires confirm_destructive: true when the
source has data.
sources_status (read): per-source diagnostic returning clone_state
('healthy' | 'missing' | 'not-a-dir' | 'no-git' | 'url-drift' |
'corrupted' | 'not-applicable') — lets a remote MCP caller diagnose a
busted clone without SSH access to the brain host.
test/whoami.test.ts (9 tests): pinned transport-detection for all four
return shapes including Q3 fail-closed throw under both auth=undefined
and remote=undefined cast-bypass paths.
test/sources-mcp.test.ts (16 tests): op-metadata pins (scope, mutating,
localOnly), functional handler shape against PGLite, hasScope-driven
scope-enforcement smoke test simulating the serve-http.ts:673 gate
(read-only token rejected for sources_add; sources_admin token allowed;
admin token allowed for everything; gstack /setup-gbrain Path 4 token
covers all 4 ops), SSRF gate at the op layer.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(sync): re-clone fallback when clone is missing/no-git/corrupted
src/commands/sync.ts gets a v0.28-aware front-half. When the source has
config.remote_url, performSync calls validateRepoState before the existing
fast-forward pull path:
- 'healthy' → fall through to existing pull (unchanged)
- 'missing' → loud stderr "auto-recovery: re-cloning <id>", then
'no-git' recloneIfMissing handles the temp-dir + rename. Sync
'not-a-dir' continues from the freshly-cloned head.
- 'corrupted' → throw with structured hint pointing at sources remove
+ add (no syncing wrong state).
- 'url-drift' → throw with hint pointing at the (deferred) sources
rebase-clone command.
Closes the operator-confidence gap: rm -rf $GBRAIN_HOME/clones/<id>/ no
longer breaks future syncs. The next sync sees the missing dir and
recovers via the recorded URL.
src/core/operations.ts: extend ErrorCode with 'unknown_transport' so
whoami's Q3 fail-closed path types check.
test/sources-resync-recovery.test.ts (12 tests): full validateRepoState
state matrix exercised under fake-git, recloneIfMissing recovery from
each degraded state, idempotent on healthy clones, the sync.ts:320
integration path that drives the recovery.
test/sources-ops.test.ts + test/sources-mcp.test.ts: drop the
GBRAIN_PGLITE_SNAPSHOT-disable line so these tests stop forcing cold
init across the parallel-shard runner. With snapshot allowed, init time
drops from 6+s to ~50ms and parallel runs stay under the 5s hook
timeout.
test/sources-mcp.test.ts: tighten scope literal-type so tsc keeps the
union narrow.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(cli): sources add --url + restore re-clone, thin-wrapper refactor
src/commands/sources.ts now delegates the data-mutation work to
src/core/sources-ops.ts (added in the previous commit). The CLI handler
parses argv, calls into addSource, and formats output.
Two new flags on `gbrain sources add`:
- `--url <https-url>` : federated remote-clone path (clone + INSERT +
rename, atomic rollback on failure).
- `--clone-dir <path>` : override the default
$GBRAIN_HOME/clones/<id>/ destination.
Validation rejects mutually-exclusive `--url` + `--path`. Errors from
the ops layer (SourceOpError) propagate through the CLI's standard
error wrapper in src/cli.ts so existing tests that assert throw shape
keep passing.
`gbrain sources restore <id>` (T4 from eng review): if the source has a
remote_url AND the on-disk clone was autopurged, call recloneIfMissing
before declaring success. Clone errors print a WARN with recovery
hints rather than failing the restore — the DB row is what restore
guarantees; the clone is best-effort.
54 sources-related tests pass (existing test/sources.test.ts +
sources-ops + sources-mcp).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(doctor,cycle): orphan-clones surface + autopilot purge phase (P1)
addSource's atomicity contract uses a temp dir that gets renamed to the
final clone path. If the process is SIGKILL'd between clone-finish and
rename, the temp dir orphans on disk. Without sweeping these, a brain
server accumulates gigabytes over months of failed `sources add --url`
attempts.
Two layers:
1. `gbrain doctor` now surfaces stale entries. A new orphan_clones check
walks $GBRAIN_HOME/clones/.tmp/, names anything older than 24h, and
prints a warn with disk-byte estimate. Operators see the leak before
`df` complains.
2. The autopilot cycle's existing `purge` phase grows a substep that
nukes .tmp/ entries past the same 72h TTL the page-soft-delete purge
uses. Operator behavior stays uniform across all soft-delete-style
surfaces.
Both layers are filesystem-only (no DB). On a brain that never used
--url cloning, both are no-ops.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* build(admin): scope checkboxes source from scope-constants mirror + dist
admin/src/pages/Agents.tsx Register Client modal:
- useState default sources from ALLOWED_SCOPES_LIST (defaulting `read`
to true, others false; unchanged UX for the common case).
- Scope checkbox map iterates ALLOWED_SCOPES_LIST instead of the old
hardcoded ['read','write','admin'].
Without this commit, even with the v0.28.1 server-side scope hierarchy,
operators registering an OAuth client from the admin UI cannot tick the
new sources_admin / users_admin scopes — defeats the whole gstack
/setup-gbrain Path 4 unblock.
The drift-check CI gate (scripts/check-admin-scope-drift.sh) ensures
this list stays in sync with src/core/scope.ts going forward.
admin/dist/* rebuilt via `cd admin && bun run build`. Old hash bundle
removed; new bundle (224.96 kB / 68.70 kB gzip).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: v0.28.1 — remote-source MCP + scope hierarchy + whoami
VERSION + package.json: bump to 0.28.1 (per CLAUDE.md branch-scoped
versioning rule — this branch adds substantial new features on top of
v0.28.0).
CHANGELOG.md: new top-level entry for v0.28.1 in the gstack/Garry voice
(no AI vocabulary, no em dashes, real numbers + commands). Lead
paragraph names what the user can now do that they couldn't before.
"Numbers that matter" table calls out the +5 MCP ops, +2 OAuth scopes,
and the 4-to-0 SSH-step number for gstack /setup-gbrain Path 4. "What
this means for you" closer ties the work to the operator workflow shift.
"To take advantage of v0.28.1" block has paste-ready upgrade commands
including the admin SPA rebuild step. Itemized changes section
describes the architecture cleanly without exposing scope-string
internals to public attack-surface enumeration (per CLAUDE.md
responsible-disclosure rule).
TODOS.md: file 6 follow-ups under a new "Remote-source MCP follow-ups
(v0.28.1)" section: token rotation, migration introspection in
get_health, Accept-header friendliness, sources rebase-clone for
URL-drift recovery, --filter=blob:none partial-clone option, and the
chunker_version PGLite-schema parity codex caught.
README.md: short subsection under the existing sources CLI listing
that names the new --url flag and what auto-recovery does. Capability
framing (no scope-string enumeration).
llms.txt + llms-full.txt: regenerated via `bun run build:llms` so the
documentation bundle reflects the v0.28.1 entry. The build-llms
generator's drift check passes.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* test(e2e): sources-remote-mcp — full gstack /setup-gbrain Path 4 round-trip
Spins up `gbrain serve --http` against real Postgres with a fake-git binary
in PATH (so `git clone` is exercised end-to-end without network), registers
two OAuth clients (sources_admin + read-only), mints tokens, calls the new
v0.28.1 MCP ops via /mcp, and asserts the gstack /setup-gbrain Path 4 flow
works end to end.
12 tests cover the full lifecycle:
- whoami over HTTP MCP returns transport=oauth + the right scopes
- /.well-known/oauth-authorization-server advertises all 5 scopes
- sources_add: clone fires, INSERT lands, row carries config.remote_url
- sources_status: clone_state=healthy after add
- sources_list: surfaces remote_url for the new source
- SSRF rejection: sources_add with RFC1918 URL fails at parseRemoteUrl gate
- Scope enforcement: read-only token gets insufficient_scope on sources_add
- Read-only token CAN call sources_list (read-scoped op)
- ALLOWED_SCOPES allowlist: CLI register-client rejects bogus scope
- Recovery: rm clone dir + sources_status reports clone_state=missing
- sources_remove: cascades + cleans up the auto-managed clone dir
Subprocess env threading replicates the v0.26.2 bun execSync inheritance
pattern — bun does NOT inherit process.env mutations, so every CLI
subprocess call passes env: { ...process.env } explicitly.
Cleanup contract mirrors test/e2e/serve-http-oauth.test.ts: revoke any
clients we registered, force-kill the server subprocess on SIGTERM
timeout, surface cleanup failures to stderr without throwing so real
test failures aren't masked.
The base table list in helpers.ts (ALL_TABLES) doesn't include sources
or oauth_clients, so this test explicitly truncates them in beforeAll
to avoid Q4 pre-flight collisions on re-run.
Skipped gracefully when DATABASE_URL is unset.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix: codex adversarial review — confine remote sources_admin + close SSRF gaps
Pre-ship adversarial review (codex exec) caught five issues. Four ship in
this commit; the fifth (DNS rebinding) is filed as v0.28.x follow-up.
CRITICAL — `sources_admin` tokens over HTTP MCP could plant content at any
host path. The MCP op exposed `path` and `clone_dir` to remote callers; the
op layer trusted them verbatim, then auto-recovery's rm -rf on degraded
state turned that into arbitrary delete primitives. src/core/operations.ts
sources_add handler now drops both fields when ctx.remote !== false. Local
CLI keeps the override (operator trust). Loud logger.warn when a remote
caller tries — visible in the SSE feed without leaking values.
HIGH — Steady-state `git pull --ff-only` bypassed GIT_SSRF_FLAGS entirely.
The legacy helper at src/commands/sync.ts:192 spawned git without the
-c http.followRedirects=false -c protocol.{file,ext}.allow=never
--no-recurse-submodules set that cloneRepo applies. Every recurring sync
was reopening the redirect/submodule/protocol bypass. Routed the call site
at sync.ts:381 through pullRepo from git-remote.ts so initial clone and
ongoing pull share one defensive flag set.
MEDIUM — listSources ignored its `include_archived` flag. The op
advertised the param but the function destructured it as `_opts` and
queried every row. Archived sources' ids, local_paths, and remote_urls
were leaking to read-scoped MCP callers by default. Filter in SQL
(`WHERE archived IS NOT TRUE` unless the flag is set) so archived rows
never reach the wire.
PARTIAL HIGH — IPv6 ULA fc00::/7 and link-local fe80::/10 were not in
the isInternalUrl bypass list. Only ::1/:: and IPv4-mapped IPv6 were
blocked. Added regex-based ULA + link-local rejection to url-safety.ts.
Test coverage:
- test/git-remote.test.ts: 4 new IPv6 cases (ULA fc-prefix + fd-prefix,
link-local fe80::, public IPv6 still allowed).
- test/sources-mcp.test.ts: 3 new cases pinning the remote/local
asymmetry (clone_dir override silently ignored over MCP, path nulled,
local CLI keeps the override).
- test/sources-mcp.test.ts: 2 new cases for include_archived honored.
DNS rebinding (codex finding #3): the current gate is lexical only.
A deliberate attacker who controls a hostname's A/AAAA records can still
resolve to an internal IP. Closing this requires async DNS resolution +
revalidation; filed as v0.28.x follow-up in TODOS.md so the API change
surface (parseRemoteUrl becomes async, every caller updates) lands in
its own PR.
323 tests pass (9 files); 4071 unit tests pass (full suite).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore: rebump v0.28.1 → v0.28.2 (master collision)
Caught after PR creation. master is at v0.28.1 already; this branch
forked from garrytan/v0.28-release at v0.28.0 and naively bumped to
v0.28.1 without checking the master queue. CI version-gate would have
rejected at merge time (requires VERSION strictly greater than
master's).
Root cause: I bumped VERSION mechanically during plan implementation
(echo "0.28.1" > VERSION) without consulting the queue-aware allocator
at bin/gstack-next-version. /ship Step 12's idempotency check then
classified state as ALREADY_BUMPED and the workflow's "queue drift"
comparison was the safety net I should have hit — but I skipped it.
Files updated:
- VERSION + package.json: 0.28.1 → 0.28.2
- CHANGELOG.md: header + "To take advantage of v0.28.2" subsection
- README.md: sources --url note version reference
- TODOS.md: 7 follow-up entries' version references
- llms.txt + llms-full.txt: regenerated
PR title rewrite via gstack-pr-title-rewrite.sh handled in a separate
gh pr edit call; CI version-gate now passes.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore(todos): close longmemeval-publication, file 4 follow-up TODOs
Full 500-question 4-adapter LongMemEval _s benchmark landed at
github.com/garrytan/gbrain-evals#main:ced01f0. gbrain-hybrid 97.60% R@5,
+1.0pt over MemPal raw 96.6%. Replacing the now-stale "needs full run"
TODO with closure + 4 grounded follow-ups:
1. Timeline-aware retrieval signal for temporal-reasoning questions
(P2 — closes the only category we lose to MemPal-raw)
2. Per-question batch consolidation for ~10x cold-cache speedup
(P3 — makes daily benchmark CI gate practical)
3. LongMemEval _m split run (P3 — differentiated, not yet published
by MemPal)
4. Cheaper-embedding-model recipe (P4 — recall-cost tradeoff curve)
Each TODO has the standard What/Why/Pros/Cons/Context/Depends-on shape per
the gbrain TODOS-format convention.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore(llms): regenerate llms-full.txt to match merged CLAUDE.md
CI test/build-llms.test.ts asserts the committed llms.txt/llms-full.txt
are byte-for-byte identical to what scripts/build-llms.ts produces. The
master merge brought in v0.28.9/v0.28.10/v0.28.11 + multimodal embedding
notes that updated CLAUDE.md; the bundle was stale.
No content changes. Pure regeneration via `bun run build:llms`.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs(changelog): rewrite v0.28.12 entry — lead with the LongMemEval result
Old entry buried the headline ("LongMemEval lands in the box…") under
process detail (hermetic CI test count, 25.9ms p50, schema-table
runtime enumeration). The reader cares what gbrain DOES — not how we
plumbed the harness.
New entry leads with the actual number — 97.60% R@5 on the public
LongMemEval _s split, beating MemPalace raw by 1.0pt — followed by
the per-category win table that proves gbrain ties or beats MemPal in
5 of 6 question types and shows the +7.1pt assistant-voice lift.
Links to the full gbrain-evals report (97.60% headline + full
methodology + reproducible runner) so curious readers can dig deeper.
Two honest findings published in plain text: vector-only is
essentially tied with hybrid at K=5, and query expansion via Haiku is
a clean null result on this dataset. Better to publish the null than
hide it.
Reproduction block updated to match the actual gbrain-evals workflow
(clone + bun install + dataset download + bash batch runner). The
prior "download / run / hand to evaluate_qa.py" block stayed for the
in-tree CLI path.
Regenerated llms-full.txt to keep the build-llms regen-drift guard
green.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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b325f28239 |
v0.28.6 feat: takes + think + unified model config + per-token MCP allow-list (#563)
* v0.28 schema: takes + synthesis_evidence (v31) + access_tokens.permissions (v32)
Migration v31 adds the takes table (typed/weighted/attributed claims) and
synthesis_evidence (provenance for `gbrain think` outputs). Page-scoped via
page_id FK (slug isn't unique alone in v0.18+ multi-source). HNSW partial
index on embedding for active rows. ON DELETE CASCADE on synthesis_evidence
so deleting a source take cascades the provenance row.
Migration v32 adds access_tokens.permissions JSONB with safe-default
backfill (`{"takes_holders":["world"]}`). Default keeps non-world holders
hidden from MCP-bound tokens until the operator explicitly grants access
via the v0.28 auth permissions CLI.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 engine: addTakesBatch, listTakes, searchTakes/Vector, supersede, resolve, synthesis_evidence
Extends BrainEngine with the takes domain object. Both engines implement the
same surface; PGLite uses manual `$N` placeholders, Postgres uses postgres-js
unnest() — same shape as addLinksBatch and addTimelineEntriesBatch.
Methods:
- addTakesBatch (upsert via ON CONFLICT (page_id, row_num) DO UPDATE)
- listTakes (filter by holder/kind/active/resolved, takesHoldersAllowList
for MCP-bound calls, sortBy weight/since_date/created_at)
- searchTakes / searchTakesVector (pg_trgm + cosine; honor allow-list)
- countStaleTakes / listStaleTakes (mirror countStaleChunks pattern;
embedding column intentionally omitted from listStale payload)
- updateTake (mutable fields only; throws TAKE_ROW_NOT_FOUND)
- supersedeTake (transactional: insert new at next row_num, mark old
active=false, set superseded_by; throws TAKE_RESOLVED_IMMUTABLE on
resolved bets)
- resolveTake (sets resolved_*; throws TAKE_ALREADY_RESOLVED on re-resolve;
resolution is immutable per Codex P1 #13 fold)
- addSynthesisEvidence (provenance persist; ON CONFLICT DO NOTHING)
- getTakeEmbeddings (parallel to getEmbeddingsByChunkIds)
Types live in src/core/engine.ts adjacent to LinkBatchInput. Page-scoped
via page_id (slug not unique in v0.18+ multi-source). PageType gains
'synthesis'. takeRowToTake mapper in utils.ts handles Date → ISO string
normalization.
Tests: test/takes-engine.test.ts — 16 cases against PGLite covering
upsert/list/filter/search happy paths, takesHoldersAllowList isolation,
the four invariant errors (TAKE_ROW_NOT_FOUND, TAKES_WEIGHT_CLAMPED,
TAKE_RESOLVED_IMMUTABLE, TAKE_ALREADY_RESOLVED), supersede flow, resolve
metadata round-trip, FK CASCADE on synthesis_evidence when source take
deletes. All pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 model-config: unified resolveModel with 6-tier precedence + alias resolution
Replaces every hardcoded `claude-*-X` and per-phase `dream.<phase>.model`
config key with a single resolver. Hierarchy:
1. CLI flag (--model)
2. New-key config (e.g. models.dream.synthesize)
3. Old-key config (deprecated dream.synthesize.model, dream.patterns.model)
— read with stderr deprecation warning, one-per-process
4. Global default (models.default)
5. Env var (GBRAIN_MODEL or caller-supplied)
6. Hardcoded fallback
Aliases (`opus`, `sonnet`, `haiku`, `gemini`, `gpt`) resolve at the end so
any tier can use a short name. User-defined `models.aliases.<name>` config
overrides built-ins. Cycle-safe (depth 2 break). Unknown alias passes
through unchanged so users can pass full provider IDs without registering.
When new-key + old-key are BOTH set (Codex P1 #11 fix), new-key wins and
stderr warns "deprecated config X ignored; Y is set and wins". When only
old-key is set, it's honored with a softer "rename to Y before v0.30"
warning. Both warnings emit once per (key, process) — a Set memo prevents
log spam in long-running daemons.
Migrated call sites: synthesize.ts (model + verdictModel), patterns.ts
(model). subagent.ts and search/expansion.ts to be migrated later in v0.28
(staying compatible until then).
Tests: test/model-config.test.ts — 11 cases pinning the 6-tier ordering,
alias resolution + cycle break, deprecated-key warning emit-once, and
unknown-alias pass-through. All pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 takes-fence: parser/renderer/upserter + chunker strip (privacy P0 fix)
src/core/takes-fence.ts — pure functions for the fenced markdown surface:
- parseTakesFence(body) — extracts ParsedTake[] from `<!--- gbrain:takes:begin/end -->`
blocks. Strict on canonical form, lenient on hand-edits with warnings
(TAKES_FENCE_UNBALANCED, TAKES_TABLE_MALFORMED, TAKES_ROW_NUM_COLLISION).
Strikethrough `~~claim~~` → active=false; date ranges `since → until`
split into sinceDate/untilDate.
- renderTakesFence(takes) — round-trip safe with parseTakesFence.
- upsertTakeRow(body, row) — append-only per CEO-D6 + eng-D9. Creates a
fresh `## Takes` section if no fence present. row_num is monotonic
(max + 1, never gap-filled — keeps cross-page refs and synthesis_evidence
stable forever).
- supersedeRow(body, oldRow, replacement) — strikes through old row's claim
AND appends the new row at end. Both rows preserved in markdown for
git-blame archaeology.
- stripTakesFence(body) — removes the fenced block entirely. Used by the
chunker so takes content lives ONLY in the takes table.
Codex P0 #3 fix: src/core/chunkers/recursive.ts now calls stripTakesFence()
before computing chunk boundaries. Without this, page chunks would contain
the rendered takes table and the per-token MCP allow-list would be
bypassed at the index layer (token bound to takes_holders=['world'] would
see garry's hunches via page hits). Doctor's takes_fence_chunk_leak check
(plan-side) asserts no chunk contains the begin marker.
Tests: 15 cases covering canonical parse, strikethrough, date range, fence
unbalanced detection, malformed-row skip + warning, row_num collision
detection, round-trip render, append-only upsert into existing fence,
fresh-section creation, monotonic row_num under hand-edit gaps, supersede
flow, stripTakesFence verifying takes content removed AND surrounding
prose preserved. Existing chunker tests still pass (15 + 15 = 30).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 page-lock: PID-liveness file lock for atomic markdown read-modify-write
src/core/page-lock.ts — per-page file lock at
~/.gbrain/page-locks/<sha256-of-slug>.lock so two concurrent `gbrain takes
add` calls or `takes seed --refresh` from autopilot can't race on the
same `<slug>.md` read-modify-write. Eng-review fold: reuses the v0.17
cycle.lock pattern (mtime + PID liveness) but per-slug.
Differences from cycle.ts's lock:
- SHA-256 of slug for safe filenames (slashes, unicode, etc.)
- Same-pid + fresh mtime = LIVE (cycle.ts assumes one lock per process and
reclaims same-pid; page-lock allows concurrent locks for DIFFERENT slugs
in one process). mtime expiry still rescues post-crash leftovers.
- 5-min TTL (vs cycle's 30 min — page edits are short)
- `withPageLock(slug, fn)` convenience wrapper with default 30s timeout
API:
- acquirePageLock(slug, opts) → handle | null (poll-with-timeout)
- handle.refresh() / handle.release() (idempotent — only releases if pid matches)
- withPageLock(slug, fn, opts) — acquire + run + release-in-finally
Tests: 10 cases — fresh acquire, live holder returns null, stale-mtime
reclaim, dead-PID reclaim, refresh updates timestamp, foreign-pid release
is no-op, withPageLock callback runs and releases on success/failure,
timeout-throws when held, SHA-256 filename safety for slashes/unicode.
All pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 extract-takes: dual-path phase (fs|db) + since/until_date as TEXT
src/core/cycle/extract-takes.ts — new phase that materializes the takes
table from fenced markdown blocks. Two paths mirror src/commands/extract.ts:
- extractTakesFromFs: walk *.md under repoPath, parse fences, batch upsert
- extractTakesFromDb: iterate engine.getAllSlugs(), parse each page's
compiled_truth+timeline, batch upsert (mutation-immune snapshot iteration)
Single dispatcher extractTakes(opts) routes by source. Honors:
- slugs filter for incremental re-extract (pipes from sync→extract)
- dryRun: count would-be upserts, write nothing
- rebuild: DELETE FROM takes WHERE page_id = $1 before re-insert (clean
slate when markdown is canonical and DB has drifted)
Schema fix: since_date/until_date were DATE in the original v31 migration.
Spec uses partial dates ('2017-01', '2026-04-29 → 2026-06') that Postgres
DATE rejects. Changed to TEXT in both the Postgres and PGLite blocks so
parser-rendered ranges round-trip cleanly. Loses the ability to do
date-range arithmetic in SQL, but date math on opinion timelines is
out of scope for v0.28 anyway. utils.ts dateOrNull now annotated as
v0.28 TEXT-aware.
Migration v31 has not been deployed yet (this branch is the v0.28 release
candidate), so the type swap is free. No data migration needed.
Tests: test/extract-takes.test.ts — 5 cases against PGLite covering full
walk + fence-skip on no-fence pages, takes-table populated post-extract,
incremental slugs filter, dry-run no-write, rebuild=true clears + re-inserts
ad-hoc rows. test/takes-engine.test.ts (16), test/takes-fence.test.ts (15)
all still pass — 36/36 takes tests green.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 takes CLI: list, search, add, update, supersede, resolve
src/commands/takes.ts — surfaces the engine methods + takes-fence library
through a single `gbrain takes <subcommand>` entrypoint:
takes <slug> list with filters + sort
takes search "<query>" pg_trgm keyword search across all takes
takes add <slug> --claim ... ... append (markdown + DB, atomic via lock)
takes update <slug> --row N ... mutable-fields update (markdown + DB)
takes supersede <slug> --row N ... strikethrough old + append new
takes resolve <slug> --row N --outcome record bet resolution (immutable)
Markdown is canonical. Every mutate command:
1. acquires the per-page file lock (withPageLock)
2. re-reads the .md file
3. applies the edit via takes-fence (upsertTakeRow / supersedeRow)
4. writes the .md file back
5. mirrors to the DB via the engine method
6. releases the lock (auto via finally)
Resolve currently writes only to DB — surfacing resolved_* in the markdown
table is deferred to v0.29 (the takes-fence renderer's column set is
fixed at # | claim | kind | who | weight | since | source per spec).
Wired into src/cli.ts dispatch + CLI_ONLY allowlist. Help text follows the
project convention (orphans/embed/extract pattern). --dir flag overrides
sync.repo_path config when working outside the configured brain.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 MCP + auth: takes_list / takes_search / think ops + per-token allow-list
OperationContext gains takesHoldersAllowList — server-side filter for
takes.holder field threaded from access_tokens.permissions through dispatch
into the engine SQL. Closes Codex P0 #3 at the dispatch layer (chunker
strip already closed the page-content side in the previous commit).
src/core/operations.ts — three new ops:
- takes_list: lists takes with holder/kind/active/resolved filters; honors
ctx.takesHoldersAllowList for MCP-bound calls
- takes_search: pg_trgm keyword search; honors allow-list
- think: op surface registered (returns not_implemented envelope until
Lane D's pipeline lands). Remote callers cannot save/take per Codex P1 #7.
src/mcp/dispatch.ts — DispatchOpts.takesHoldersAllowList threads into
buildOperationContext.
src/mcp/http-transport.ts — validateToken now reads
access_tokens.permissions.takes_holders, defaults to ['world'] when the
column is absent or malformed (default-deny on private hunches).
auth.takesHoldersAllowList passed to dispatchToolCall.
src/mcp/server.ts (stdio) — defaults to takesHoldersAllowList: ['world']
since stdio has no per-token auth. Operators wanting full visibility use
`gbrain call <op>` directly (sets remote=false).
src/commands/auth.ts — `gbrain auth create <name> --takes-holders w,g,b`
flag persists the per-token list; new `auth permissions <name>
set-takes-holders <list>` updates an existing token.
Tests: test/takes-mcp-allowlist.test.ts — 8 cases against PGLite proving
the threading: local-CLI sees all holders, ['world'] returns only public,
['world','garry'] returns 2/3, no-overlap returns empty (no fallback),
search honors allow-list, remote save/take on think rejected with
not_implemented envelope.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28.0: ship-prep — VERSION, CHANGELOG, migration orchestrator, skill
Closes the v0.28 ship-prep cycle. Bumps VERSION + package.json + bun.lock
to 0.28.0. v0_28_0 migration orchestrator runs three idempotent phases on
upgrade:
- Schema verify: asserts schema_version >= 32 (migrations v31 + v32 already
applied by the schema runner during gbrain upgrade); fails clean if not.
- Backfill takes: inline runs `extractTakes(engine, { source: 'db' })` so
any pre-existing fenced takes tables in markdown populate the takes
index. Idempotent; ON CONFLICT DO UPDATE keeps the table in sync.
- Re-chunk TODO: queues a pending-host-work entry asking the host agent
to re-import pages with takes content so the v0.28 chunker-strip rule
(Codex P0 #3 fix) applies retroactively. Pages imported under v0.28+
already have takes content stripped from chunks at index time; this
TODO catches up legacy pages.
skills/migrations/v0.28.0.md — agent-readable upgrade guide. Walks
through doctor verification, deprecated-key migration, MCP token
visibility configuration, and a "try the takes layer" smoke test.
CHANGELOG.md — v0.28.0 release-summary in the GStack voice (no AI
vocabulary, no em dashes, real numbers from git diff stat) + the
mandatory "To take advantage of v0.28.0" block + itemized changes by
subsystem (schema, engine, markdown surface, model config, MCP+auth,
CLI, tests, accepted risks).
Final test sweep: 65/65 v0.28 tests pass across 6 files. typecheck clean.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 think pipeline: gather → sanitize → synthesize → cite-render → CLI
src/core/think/sanitize.ts — prompt-injection defense for take claims:
14 jailbreak patterns (ignore-prior, role-jailbreak, close-take tag,
DAN, system-prompt overrides, eval-shell hooks) plus structural framing
(takes wrapped in <take id="..."> tags the model is told to treat as
DATA). Length-cap at 500 chars. Renders evidence blocks for the prompt.
src/core/think/prompt.ts — system prompt + structured-output schema.
Hard rules: cite every claim, mark hunches/low-weight explicitly,
surface conflicts (never silently pick), surface gaps. JSON schema
with answer + citations[] + gaps[]. Prompt adapts to anchor / time
window / save flag.
src/core/think/cite-render.ts — structured citations + regex fallback
(Codex P1 #4 fold). normalizeStructuredCitations validates the model's
structured output; parseInlineCitations is the body-scan fallback when
the model omits the structured field. resolveCitations dispatches and
records CITATIONS_REGEX_FALLBACK warning when used.
src/core/think/gather.ts — 4-stream parallel retrieval:
1. hybridSearch (pages, existing primitive)
2. searchTakes (keyword, pg_trgm)
3. searchTakesVector (vector, when embedQuestion fn supplied)
4. traversePaths (graph, when --anchor set)
RRF fusion (k=60). Each stream wrapped in try/catch — partial gather
beats no synthesis. Honors takesHoldersAllowList for MCP-bound calls.
src/core/think/index.ts — runThink orchestrator + persistSynthesis:
INTENT (regex classify) → GATHER → render evidence blocks → resolveModel
('models.think' → 'models.default' → GBRAIN_MODEL → opus) → LLM call
(injectable client) → JSON parse with code-fence + fallback strip →
resolveCitations → ThinkResult. persistSynthesis writes a synthesis
page + synthesis_evidence rows (page_id resolved per slug; page-level
citations skip evidence). Degrades gracefully without ANTHROPIC_API_KEY.
Round-loop scaffolding in place (rounds=1 only path exercised in v0.28).
src/commands/think.ts — `gbrain think "<question>"` CLI. Flag parsing
strips --anchor, --rounds, --save, --take, --model, --since, --until,
--json. Local CLI = remote=false, so save/take honored. Human-readable
output by default; --json for agent consumption.
operations.ts — `think` op now calls runThink (was a not_implemented
stub). Remote callers can't save/take per Codex P1 #7. Returns full
ThinkResult plus saved_slug + evidence_inserted.
cli.ts — wired into dispatch + CLI_ONLY allowlist.
Tests: test/think-pipeline.test.ts — 18 cases against PGLite covering
sanitize patterns, structural rendering, citation parsing (structured +
regex fallback + dedup + invalid-slug rejection), gather streams +
allow-list filter, full pipeline with stub client, malformed-LLM
fallback path, no-API-key graceful degradation, persistSynthesis writes
page + evidence rows. All pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 dream phases: auto-think + drift + budget meter (Codex P1 #10 fold)
src/core/anthropic-pricing.ts — USD/1M-tokens map for Claude 4.7 family
plus older aliases. estimateMaxCostUsd returns null on unpriced models so
the meter caller can warn-once and bypass the gate.
src/core/cycle/budget-meter.ts — cumulative cost ledger. Each submit
estimates max-cost from (model + estimatedInputTokens + maxOutputTokens),
accumulates per-cycle, refuses next submit when projected > cap. Codex
P1 #10 fold: non-Anthropic models (gemini, gpt) bypass with one stderr
warn per process and `unpriced=true` on the result. Budget=0 disables
the gate. Audit trail at ~/.gbrain/audit/dream-budget-YYYY-Www.jsonl.
src/core/cycle/auto-think.ts — auto_think dream phase. Reads
dream.auto_think.{enabled,questions,max_per_cycle,budget,cooldown_days,
auto_commit}. Iterates configured questions through runThink with the
BudgetMeter pre-checking each submit. Cooldown timestamp written ONLY on
success (matches v0.23 synthesize pattern — retries after partial
failures pick back up). When auto_commit=true, persists synthesis pages
via persistSynthesis. Default-disabled.
src/core/cycle/drift.ts — drift dream phase scaffold. Reads
dream.drift.{enabled,lookback_days,budget,auto_update}. Surfaces takes
in the soft band (weight 0.3-0.85, unresolved) that have recent timeline
evidence on the same page. v0.28 ships the orchestration; the LLM judge
that proposes weight adjustments lands in v0.29. modelId + meter wired
now so the ledger captures gate state for callers that opt in.
Tests:
- test/budget-meter.test.ts (7 cases) — pricing-map coverage, allow path,
cumulative-deny, budget=0 disabled, unpriced bypass+warn-once, ledger
captures all events, ISO-week filename branch.
- test/auto-think-phase.test.ts (9 cases) — auto_think enable/skip,
questions empty, success → cooldown ts written, cooldown blocks rerun,
budget exhausted → partial. drift not_enabled, soft-band candidate
detection, complete + dry-run paths.
All pass. Typecheck clean.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 e2e Postgres: takes engine + extract + MCP allow-list (12 cases)
test/e2e/takes-postgres.test.ts — full v0.28 takes pipeline against real
Postgres (gated on DATABASE_URL). 12 cases:
- addTakesBatch upsert via unnest() bind path (Postgres-specific)
- listTakes filters: holder, kind, sort=weight, takesHoldersAllowList
- searchTakes pg_trgm + allow-list filter
- supersedeTake transactional path (BEGIN/COMMIT semantics)
- resolveTake immutability — second resolve throws TAKE_ALREADY_RESOLVED
- synthesis_evidence FK CASCADE on take delete
- countStaleTakes + listStaleTakes filter active+null
- extractTakesFromDb populates takes from fenced markdown
- MCP dispatch with takesHoldersAllowList=['world'] returns only world
- MCP dispatch local-CLI path returns all holders
- MCP dispatch takes_search honors allow-list
- think op forces remote_persisted_blocked even for save+take
postgres-engine.ts: addTakesBatch boolean[] serialization fix.
postgres-js auto-detects element type from JS arrays; for booleans it
mis-detects as scalar. Cast through text[] (`'true' | 'false'`) then
SQL-cast to boolean[] — same pattern other batch methods rely on for
type-stable bind shapes.
test/e2e/helpers.ts: setupDB now (a) tolerates non-existent tables in
TRUNCATE (for fresh DBs where v31 hasn't yet created takes/synthesis_evidence)
and (b) calls engine.initSchema() to actually run migrations.
test/takes-mcp-allowlist.test.ts: updated 2 think-op cases to match
Lane D's landed pipeline. They previously asserted not_implemented
envelopes; now they assert remote_persisted_blocked + NO_ANTHROPIC_API_KEY
graceful-degrade behavior.
Run: DATABASE_URL=postgres://localhost:5435/gbrain_test bun test test/e2e/takes-postgres.test.ts
Result: 12/12 pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 dream phases: local DreamPhaseResult type (avoid premature CyclePhase enum extension)
cycle.ts's PhaseResult is shaped {phase, status, summary, details} with a
narrow PhaseStatus enum ('ok'|'warn'|'fail'|'skipped') and CyclePhase enum
that doesn't yet include 'auto_think'/'drift'. The phases ship standalone
in v0.28 (cycle.ts dispatcher integration is v0.28.x); using PhaseResult
forced premature enum extension.
Introduces DreamPhaseResult exported from auto-think.ts:
{ name: 'auto_think'|'drift'; status: 'complete'|'partial'|'failed'|'skipped';
detail: string; totals?: Record<string,number>; duration_ms: number }
drift.ts re-exports the same type. When v0.28.x wires the dispatcher, the
adapter at the call site can map DreamPhaseResult → PhaseResult cleanly.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 e2e: access_tokens.permissions JSONB end-to-end (5 cases)
test/e2e/auth-permissions.test.ts — closes the v0.28 token-allow-list
verification loop against real Postgres. Exercises:
- Migration v32 default backfill: new tokens created without a permissions
column get {takes_holders: ["world"]} via the schema DEFAULT clause.
- Explicit ["world","garry"] → dispatch.takes_list filters to those
holders only; brain hunches stay hidden from this token.
- ["world"] default-deny token → takes_search hits filtered to public claims.
- {} permissions row (operator tampered) gracefully defaults to ["world"]
via the HTTP transport's validateToken parsing.
- revoked_at IS NOT NULL → token excluded from active token query.
Avoids the postgres-js JSONB double-encode trap (CLAUDE.md memory): pass
the object directly to executeRaw, no JSON.stringify, no ::jsonb cast.
All 5 pass against pgvector/pgvector:pg16 on port 5435. Combined v0.28
test sweep: 116/116 across 11 files.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28 e2e: chunker takes-strip integration test (Codex P0 #3 verification)
test/e2e/chunker-takes-strip.test.ts — verifies the chunker actually
strips fenced takes content end-to-end through the import pipeline.
This is the Codex P0 #3 fix's verification path: takes content lives
ONLY in the takes table for retrieval, never duplicated in
content_chunks where the per-token MCP allow-list cannot reach.
5 cases:
- chunkText (unit) output never contains TAKES_FENCE_BEGIN/END markers
- chunkText output never contains fenced claim text
- chunkText output retains non-fence prose (no over-stripping)
- importFromContent end-to-end: imported page has chunks but none
contain fenced content
- takes_fence_chunk_leak doctor invariant: zero rows globally where
chunk_text matches `<!--- gbrain:takes:%`
Final v0.28 test sweep:
121 pass, 0 fail, 336 expect() calls, 12 files
Coverage: schema migrations, engine methods (PGLite + Postgres),
takes-fence parser, page-lock, extract phase, takes CLI engine
surface, model config 6-tier resolver, MCP+auth allow-list,
think pipeline (gather + sanitize + cite-render + synthesize),
auto-think + drift + budget meter, JSONB end-to-end, chunker
strip integration. ~95% of v0.28 surface area covered.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix CI: apply-migrations skippedFuture arrays + http-transport SQL mock
Two CI failures from PR #563:
test/apply-migrations.test.ts (2 fails) — `buildPlan` tests assert exact
skippedFuture arrays at fixed installed-version stamps. Adding v0.28.0 to
the migration registry means it shows up in skippedFuture when the test
runs at installed=0.11.1 / installed=0.12.0. Append '0.28.0' to both
hardcoded arrays.
test/http-transport.test.ts (8 fails) — the FakeEngine mock string-prefix
matches `SELECT id, name FROM access_tokens` to return a row. v0.28's
validateToken now selects `SELECT id, name, permissions FROM access_tokens`
to read the per-token takes_holders allow-list. Mock returned [] on the
new query → validateToken treated every token as invalid → 401.
Fix: mock now matches both query shapes. validTokens row gets a default
`{takes_holders: ['world']}` permission injected when caller didn't
supply one (mirrors the migration v33 column DEFAULT). Updated
FakeEngineConfig type to allow tests to pass explicit permissions.
Verification:
bun test test/apply-migrations.test.ts → 18/18 pass
bun test test/http-transport.test.ts → 24/24 pass
bun run typecheck → clean
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix CI: add scope annotations to v0.28 ops (takes_list/takes_search/think)
test/oauth.test.ts enforces an invariant from master's v0.26 OAuth landing:
every Operation must have `scope: 'read' | 'write' | 'admin'`, and any op
flagged `mutating: true` must be 'write' or 'admin'. My v0.28 ops were added
before master shipped v0.26 + the new invariant; the merge surfaced the gap.
Annotations:
- takes_list → read
- takes_search → read
- think → write (mutating: true; --save persists synthesis page)
Verification:
bun test test/oauth.test.ts → 42/42 pass
bun run typecheck → clean
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.28.2 feat: remote-source MCP + scope hierarchy + whoami (#690)
* refactor(core): extract SSRF helpers from integrations.ts to core/url-safety.ts
src/core/git-remote.ts (next commit) needs isInternalUrl etc. but importing
from src/commands/ would invert the layering boundary (no existing
src/core/ file imports from src/commands/). Extract the SSRF helpers
(parseOctet, hostnameToOctets, isPrivateIpv4, isInternalUrl) into a new
src/core/url-safety.ts and have integrations.ts re-export for backward
compat. test/integrations.test.ts continues to pass without changes (110
existing tests, 214 expects).
Why this matters for v0.28: the upcoming sources --url feature reuses
this SSRF gate for git-clone URL validation. Codex review caught that
re-rolling weaker URL classification would regress on the IPv6/v4-mapped/
metadata/CGNAT bypass forms that integrations.ts already handles.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(core): add git-remote module — SSRF-defensive clone/pull + state probe
New src/core/git-remote.ts (~210 lines) for v0.28's remote-source feature:
- GIT_SSRF_FLAGS exported const: -c http.followRedirects=false,
-c protocol.file.allow=never, -c protocol.ext.allow=never,
--no-recurse-submodules. Single source of truth shared by cloneRepo
and pullRepo so a future flag added to one path lands on both.
Closes the SSRF surfaces codex flagged: DNS rebinding via redirects,
.gitmodules as a second-fetch surface, file:// scheme in remotes.
- parseRemoteUrl: https-only, rejects embedded credentials and path
traversal, delegates internal-target classification to isInternalUrl
from url-safety.ts (covers RFC1918, link-local, loopback, IPv6, CGNAT
100.64/10, metadata hostnames, hex/octal/single-int bypass forms).
GBRAIN_ALLOW_PRIVATE_REMOTES=1 escape hatch with stderr warning is
needed for self-hosted git over Tailscale (CGNAT trips the gate).
- cloneRepo: --depth=1 default (full clone via depth: 0); refuses
non-empty destDirs; spawns git via execFileSync (no shell injection)
with GIT_TERMINAL_PROMPT=0 + askpass=/bin/false to prevent credential
prompts. timeoutMs default 600s.
- pullRepo: -C path + GIT_SSRF_FLAGS + pull --ff-only, same env confine.
- validateRepoState: 6-state decision tree (missing | not-a-dir |
no-git | corrupted | url-drift | healthy). Used by performSync's
re-clone branch to recover from rmd clone dirs and refuse syncs on
url-drift or corruption.
test/git-remote.test.ts (304 lines, 32 tests): GIT_SSRF_FLAGS exact
shape, all parseRemoteUrl rejection cases including dedicated CGNAT
100.64/10 with/without GBRAIN_ALLOW_PRIVATE_REMOTES (codex T3 case),
fake-git harness for argv assertions on cloneRepo/pullRepo, all 6
validateRepoState branches.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(core): add scope hierarchy + ALLOWED_SCOPES allowlist
New src/core/scope.ts (~120 lines) for v0.28's scoped MCP feature.
Hierarchy:
- admin implies all (escape hatch)
- write implies read
- sources_admin and users_admin are siblings (different axes —
sources-mgmt vs user-account-mgmt; neither implies the other)
Exported:
- hasScope(grantedScopes, requiredScope): the canonical scope check.
Replaces exact-string-match at three call sites in upcoming commits
(serve-http.ts:673, oauth-provider.ts:365 F3 refresh, oauth-provider.ts:498
token issuance). Without this rewrite, an admin-grant token would
fail to refresh down to sources_admin (codex finding).
- ALLOWED_SCOPES set + ALLOWED_SCOPES_LIST sorted array (deterministic
for OAuth metadata wire format and drift-check output).
- assertAllowedScopes / InvalidScopeError: registration-time gate so
tokens with bogus scope strings (read flying-unicorn) get rejected
with RFC 6749 §5.2 invalid_scope at auth.ts:296 + DCR /register +
registerClientManual. Today's behavior accepts any string silently.
- parseScopeString: space-separated wire format → array.
Forward-compat: hasScope ignores unknown granted scopes rather than
throwing, so pre-allowlist tokens with weird scope strings continue
working without crashes (registration is the gate, runtime is best-effort).
test/scope.test.ts (178 lines, 35 tests): hierarchy table including
all-implies for admin, sibling non-implication of *_admin scopes,
write→read but not the reverse, F3 refresh-token subset semantics
under hasScope, ALLOWED_SCOPES_LIST sorted-pinning, allowlist
rejection cases, parseScopeString edge cases (undefined/null/empty).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* build(admin): scope-constants mirror + drift CI for src/core/scope.ts
The admin React SPA's tsconfig.json scopes include: ['src'] to admin/src/,
so it cannot directly import ../../src/core/scope.ts. The plan considered
widening the include or generating a single source of truth; both options
either couple the SPA to the gbrain monorepo or add a build step. Eng
review picked the boring choice: hand-maintained mirror at
admin/src/lib/scope-constants.ts plus a CI drift check.
Files:
- admin/src/lib/scope-constants.ts: hand-maintained ALLOWED_SCOPES_LIST
duplicate, sorted alphabetically to match src/core/scope.ts.
- scripts/check-admin-scope-drift.sh: extracts the list from each file
via awk, normalizes via tr/sort, diffs. Exits 0 on match, 1 on drift
(with full breakdown of which scopes diverged), 2 on internal error.
Tested both passing and corrupted paths.
- package.json: wires check:admin-scope-drift into both `verify` and
`check:all` so any update to src/core/scope.ts that forgets the
admin-side mirror fails the build.
The Agents.tsx scope-checkbox sites (5 hardcoded locations) get updated
in a later commit to import from this constants file.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(oauth): hasScope hierarchy + ALLOWED_SCOPES allowlist at registration
Switch three call sites in oauth-provider.ts from exact-string-match to
hasScope() so the v0.28 sources_admin and users_admin scopes — and the
admin-implies-all + write-implies-read hierarchy in src/core/scope.ts —
work end to end:
- F3 refresh-token subset enforcement at line 365: previously rejected
admin → sources_admin refresh because exact-match treated them as
unrelated scopes. gstack /setup-gbrain Path 4 needs admin tokens to
refresh down to least-privilege sources_admin scope; this fix lands
that path.
- Token issuance intersection at line 498 (client_credentials grant):
same hasScope swap so a client whose stored grant is `admin` can mint
tokens including any implied scope.
- registerClient (DCR /register) and registerClientManual: validate
every scope string against ALLOWED_SCOPES via assertAllowedScopes.
Pre-fix the system silently accepted `--scopes "read flying-unicorn"`
and persisted the bogus string in oauth_clients.scope. Post-fix the
caller gets RFC 6749 §5.2 invalid_scope. Existing rows with
pre-allowlist scopes keep working (allowlist gates registration only).
Tests amended in test/oauth.test.ts:
- T1 (eng-review): admin grant CAN refresh down to sources_admin
- T1 sibling: write grant CANNOT refresh up to sources_admin
- ALLOWED_SCOPES allowlist coverage (manual + DCR paths, all 5 valid)
- Scope-annotation contract tests widened to accept the v0.28 union
62 OAuth tests pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(serve-http): hasScope at /mcp + advertise full ALLOWED_SCOPES
Two changes against src/commands/serve-http.ts:
- Line 195: scopesSupported on the mcpAuthRouter options switches from the
hardcoded ['read','write','admin'] to Array.from(ALLOWED_SCOPES_LIST).
Without this, /.well-known/oauth-authorization-server keeps reporting
the old triple, so MCP clients (Claude Desktop, ChatGPT, Perplexity)
cannot discover the v0.28 sources_admin and users_admin scopes via
standard discovery — they would have to be pre-configured out of band.
- Line 673: request-time scope check on /mcp swaps
authInfo.scopes.includes(requiredScope) for hasScope(...). This was
the most-cited codex finding: without it, sources_admin tokens could
not even satisfy a `read`-scoped op (sources_admin doesn't include
the literal string "read"). hasScope routes through the hierarchy
table in src/core/scope.ts so admin implies all and write implies
read at the gate too.
T2 amendment in test/e2e/serve-http-oauth.test.ts: assert
/.well-known/oauth-authorization-server includes all 5 scopes in
scopes_supported. Pre-v0.28 the list was hardcoded to ['read','write',
'admin'] and this assertion would have failed. (The test is
Postgres-gated; runs under bun run test:e2e with DATABASE_URL set.)
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(core): sources-ops module — atomic clone + symlink-safe cleanup
src/core/sources-ops.ts (~470 lines): pure async functions extracted from
src/commands/sources.ts so the CLI handlers and the new MCP ops share
one implementation.
addSource: D3 atomicity contract from the eng review.
1. Validate id (matches existing SOURCE_ID_RE).
2. Q4 pre-flight SELECT — fail loudly with structured `source_id_taken`
before any clone work. Pre-fix the existing CLI used INSERT…ON
CONFLICT DO NOTHING which silently no-op'd; with clone-first that
would orphan the temp dir.
3. parseRemoteUrl gate (delegates to isInternalUrl from url-safety.ts).
4. Clone into $GBRAIN_HOME/clones/.tmp/<id>-<rand>/ via the new
git-remote helpers.
5. INSERT row with local_path=<final clone dir>, config.remote_url=<url>.
6. fs.renameSync(tmp/, final/). Rollback on either-side failure unlinks
the temp dir; rename-failed path also DELETEs the just-INSERTed row
best-effort.
removeSource: clone-cleanup with realpath+lstat confinement matching
validateUploadPath() shape at src/core/operations.ts:61. String startsWith
is symlink-unsafe and would let $GBRAIN_HOME/clones/<id> → /etc resolve
out of the confine. Two defenses layered:
- isPathContained (realpath-resolves both sides + parent-with-sep
string check) rejects symlinks whose target falls outside the
confine.
- lstat-then-isSymbolicLink check refuses symlinks whose realpath
happens to land back inside the confine (defense in depth).
getSourceStatus: returns clone_state via validateRepoState (the 6-state
decision tree from git-remote.ts). Lets a remote MCP caller diagnose
"healthy | missing | not-a-dir | no-git | url-drift | corrupted" without
SSH access to the brain host. listSources additionally exposes
remote_url so callers can see which sources are auto-managed.
recloneIfMissing: T4 follow-up for `gbrain sources restore` after the
clone dir was autopurged — re-clones via the same temp + rename
atomicity contract. Idempotent (returns false when clone is already
healthy).
test/sources-ops.test.ts (~470 lines, 24 tests): pre-flight collision
(Q4), happy paths for both --path and --url, all four D3 rollback paths
(clone-fail before INSERT, INSERT-fail after clone, rename-fail
post-INSERT, atomic temp-dir cleanup), symlink-target-OUTSIDE-clones
(realpath confinement), symlink-target-INSIDE-clones (lstat-check),
removeSource refuses to delete user-supplied paths, refuses "default"
source, getSourceStatus clone_state branches, T4 recloneIfMissing
recovery + idempotent + no-op for path-only sources, isPathContained
unit tests covering subtree / outside / symlink-escape / fail-closed.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(operations): whoami + sources_{add,list,remove,status} MCP ops
Five new ops in src/core/operations.ts auto-flow through src/mcp/tool-defs.ts
so MCP clients (Claude Desktop, ChatGPT, Perplexity, OpenClaw) get them via
standard tools/list discovery — no SDK or transport code changes needed.
Operation.scope union widened to add 'sources_admin' and 'users_admin' (the
v0.28 hierarchy from src/core/scope.ts).
whoami (scope: read): introspect calling identity over MCP.
- Returns `{transport: 'oauth', client_id, client_name, scopes, expires_at}`
for OAuth clients (clientId starts with gbrain_cl_).
- Returns `{transport: 'legacy', token_name, scopes, expires_at: null}`
for grandfathered access_tokens.
- Returns `{transport: 'local', scopes: []}` when ctx.remote === false.
Empty scopes (NOT ['read','write','admin']) is the D2 decision —
returning OAuth-shaped scopes for local callers would resurrect the
v0.26.9 footgun where code conditionally trusted on
`auth.scopes.includes('admin')` instead of `ctx.remote === false`.
- Q3 fail-closed: throws unknown_transport when remote=true AND auth is
missing OR ctx.remote is the literal `undefined` (cast bypass guard).
A future transport that forgets to thread auth doesn't get a free
pass.
sources_add (sources_admin, mutating): register a source by --path
(existing v0.17 behavior) or --url (v0.28 federated remote-clone path).
Calls into addSource from sources-ops.ts which owns the temp-dir +
rename atomicity.
sources_list (read): list registered sources with page counts, federated
flag, and remote_url. The remote_url field is new — lets a remote MCP
caller see which sources are auto-managed.
sources_remove (sources_admin, mutating): cascade-delete a source +
symlink-safe clone cleanup. Requires confirm_destructive: true when the
source has data.
sources_status (read): per-source diagnostic returning clone_state
('healthy' | 'missing' | 'not-a-dir' | 'no-git' | 'url-drift' |
'corrupted' | 'not-applicable') — lets a remote MCP caller diagnose a
busted clone without SSH access to the brain host.
test/whoami.test.ts (9 tests): pinned transport-detection for all four
return shapes including Q3 fail-closed throw under both auth=undefined
and remote=undefined cast-bypass paths.
test/sources-mcp.test.ts (16 tests): op-metadata pins (scope, mutating,
localOnly), functional handler shape against PGLite, hasScope-driven
scope-enforcement smoke test simulating the serve-http.ts:673 gate
(read-only token rejected for sources_add; sources_admin token allowed;
admin token allowed for everything; gstack /setup-gbrain Path 4 token
covers all 4 ops), SSRF gate at the op layer.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(sync): re-clone fallback when clone is missing/no-git/corrupted
src/commands/sync.ts gets a v0.28-aware front-half. When the source has
config.remote_url, performSync calls validateRepoState before the existing
fast-forward pull path:
- 'healthy' → fall through to existing pull (unchanged)
- 'missing' → loud stderr "auto-recovery: re-cloning <id>", then
'no-git' recloneIfMissing handles the temp-dir + rename. Sync
'not-a-dir' continues from the freshly-cloned head.
- 'corrupted' → throw with structured hint pointing at sources remove
+ add (no syncing wrong state).
- 'url-drift' → throw with hint pointing at the (deferred) sources
rebase-clone command.
Closes the operator-confidence gap: rm -rf $GBRAIN_HOME/clones/<id>/ no
longer breaks future syncs. The next sync sees the missing dir and
recovers via the recorded URL.
src/core/operations.ts: extend ErrorCode with 'unknown_transport' so
whoami's Q3 fail-closed path types check.
test/sources-resync-recovery.test.ts (12 tests): full validateRepoState
state matrix exercised under fake-git, recloneIfMissing recovery from
each degraded state, idempotent on healthy clones, the sync.ts:320
integration path that drives the recovery.
test/sources-ops.test.ts + test/sources-mcp.test.ts: drop the
GBRAIN_PGLITE_SNAPSHOT-disable line so these tests stop forcing cold
init across the parallel-shard runner. With snapshot allowed, init time
drops from 6+s to ~50ms and parallel runs stay under the 5s hook
timeout.
test/sources-mcp.test.ts: tighten scope literal-type so tsc keeps the
union narrow.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(cli): sources add --url + restore re-clone, thin-wrapper refactor
src/commands/sources.ts now delegates the data-mutation work to
src/core/sources-ops.ts (added in the previous commit). The CLI handler
parses argv, calls into addSource, and formats output.
Two new flags on `gbrain sources add`:
- `--url <https-url>` : federated remote-clone path (clone + INSERT +
rename, atomic rollback on failure).
- `--clone-dir <path>` : override the default
$GBRAIN_HOME/clones/<id>/ destination.
Validation rejects mutually-exclusive `--url` + `--path`. Errors from
the ops layer (SourceOpError) propagate through the CLI's standard
error wrapper in src/cli.ts so existing tests that assert throw shape
keep passing.
`gbrain sources restore <id>` (T4 from eng review): if the source has a
remote_url AND the on-disk clone was autopurged, call recloneIfMissing
before declaring success. Clone errors print a WARN with recovery
hints rather than failing the restore — the DB row is what restore
guarantees; the clone is best-effort.
54 sources-related tests pass (existing test/sources.test.ts +
sources-ops + sources-mcp).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(doctor,cycle): orphan-clones surface + autopilot purge phase (P1)
addSource's atomicity contract uses a temp dir that gets renamed to the
final clone path. If the process is SIGKILL'd between clone-finish and
rename, the temp dir orphans on disk. Without sweeping these, a brain
server accumulates gigabytes over months of failed `sources add --url`
attempts.
Two layers:
1. `gbrain doctor` now surfaces stale entries. A new orphan_clones check
walks $GBRAIN_HOME/clones/.tmp/, names anything older than 24h, and
prints a warn with disk-byte estimate. Operators see the leak before
`df` complains.
2. The autopilot cycle's existing `purge` phase grows a substep that
nukes .tmp/ entries past the same 72h TTL the page-soft-delete purge
uses. Operator behavior stays uniform across all soft-delete-style
surfaces.
Both layers are filesystem-only (no DB). On a brain that never used
--url cloning, both are no-ops.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* build(admin): scope checkboxes source from scope-constants mirror + dist
admin/src/pages/Agents.tsx Register Client modal:
- useState default sources from ALLOWED_SCOPES_LIST (defaulting `read`
to true, others false; unchanged UX for the common case).
- Scope checkbox map iterates ALLOWED_SCOPES_LIST instead of the old
hardcoded ['read','write','admin'].
Without this commit, even with the v0.28.1 server-side scope hierarchy,
operators registering an OAuth client from the admin UI cannot tick the
new sources_admin / users_admin scopes — defeats the whole gstack
/setup-gbrain Path 4 unblock.
The drift-check CI gate (scripts/check-admin-scope-drift.sh) ensures
this list stays in sync with src/core/scope.ts going forward.
admin/dist/* rebuilt via `cd admin && bun run build`. Old hash bundle
removed; new bundle (224.96 kB / 68.70 kB gzip).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: v0.28.1 — remote-source MCP + scope hierarchy + whoami
VERSION + package.json: bump to 0.28.1 (per CLAUDE.md branch-scoped
versioning rule — this branch adds substantial new features on top of
v0.28.0).
CHANGELOG.md: new top-level entry for v0.28.1 in the gstack/Garry voice
(no AI vocabulary, no em dashes, real numbers + commands). Lead
paragraph names what the user can now do that they couldn't before.
"Numbers that matter" table calls out the +5 MCP ops, +2 OAuth scopes,
and the 4-to-0 SSH-step number for gstack /setup-gbrain Path 4. "What
this means for you" closer ties the work to the operator workflow shift.
"To take advantage of v0.28.1" block has paste-ready upgrade commands
including the admin SPA rebuild step. Itemized changes section
describes the architecture cleanly without exposing scope-string
internals to public attack-surface enumeration (per CLAUDE.md
responsible-disclosure rule).
TODOS.md: file 6 follow-ups under a new "Remote-source MCP follow-ups
(v0.28.1)" section: token rotation, migration introspection in
get_health, Accept-header friendliness, sources rebase-clone for
URL-drift recovery, --filter=blob:none partial-clone option, and the
chunker_version PGLite-schema parity codex caught.
README.md: short subsection under the existing sources CLI listing
that names the new --url flag and what auto-recovery does. Capability
framing (no scope-string enumeration).
llms.txt + llms-full.txt: regenerated via `bun run build:llms` so the
documentation bundle reflects the v0.28.1 entry. The build-llms
generator's drift check passes.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* test(e2e): sources-remote-mcp — full gstack /setup-gbrain Path 4 round-trip
Spins up `gbrain serve --http` against real Postgres with a fake-git binary
in PATH (so `git clone` is exercised end-to-end without network), registers
two OAuth clients (sources_admin + read-only), mints tokens, calls the new
v0.28.1 MCP ops via /mcp, and asserts the gstack /setup-gbrain Path 4 flow
works end to end.
12 tests cover the full lifecycle:
- whoami over HTTP MCP returns transport=oauth + the right scopes
- /.well-known/oauth-authorization-server advertises all 5 scopes
- sources_add: clone fires, INSERT lands, row carries config.remote_url
- sources_status: clone_state=healthy after add
- sources_list: surfaces remote_url for the new source
- SSRF rejection: sources_add with RFC1918 URL fails at parseRemoteUrl gate
- Scope enforcement: read-only token gets insufficient_scope on sources_add
- Read-only token CAN call sources_list (read-scoped op)
- ALLOWED_SCOPES allowlist: CLI register-client rejects bogus scope
- Recovery: rm clone dir + sources_status reports clone_state=missing
- sources_remove: cascades + cleans up the auto-managed clone dir
Subprocess env threading replicates the v0.26.2 bun execSync inheritance
pattern — bun does NOT inherit process.env mutations, so every CLI
subprocess call passes env: { ...process.env } explicitly.
Cleanup contract mirrors test/e2e/serve-http-oauth.test.ts: revoke any
clients we registered, force-kill the server subprocess on SIGTERM
timeout, surface cleanup failures to stderr without throwing so real
test failures aren't masked.
The base table list in helpers.ts (ALL_TABLES) doesn't include sources
or oauth_clients, so this test explicitly truncates them in beforeAll
to avoid Q4 pre-flight collisions on re-run.
Skipped gracefully when DATABASE_URL is unset.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix: codex adversarial review — confine remote sources_admin + close SSRF gaps
Pre-ship adversarial review (codex exec) caught five issues. Four ship in
this commit; the fifth (DNS rebinding) is filed as v0.28.x follow-up.
CRITICAL — `sources_admin` tokens over HTTP MCP could plant content at any
host path. The MCP op exposed `path` and `clone_dir` to remote callers; the
op layer trusted them verbatim, then auto-recovery's rm -rf on degraded
state turned that into arbitrary delete primitives. src/core/operations.ts
sources_add handler now drops both fields when ctx.remote !== false. Local
CLI keeps the override (operator trust). Loud logger.warn when a remote
caller tries — visible in the SSE feed without leaking values.
HIGH — Steady-state `git pull --ff-only` bypassed GIT_SSRF_FLAGS entirely.
The legacy helper at src/commands/sync.ts:192 spawned git without the
-c http.followRedirects=false -c protocol.{file,ext}.allow=never
--no-recurse-submodules set that cloneRepo applies. Every recurring sync
was reopening the redirect/submodule/protocol bypass. Routed the call site
at sync.ts:381 through pullRepo from git-remote.ts so initial clone and
ongoing pull share one defensive flag set.
MEDIUM — listSources ignored its `include_archived` flag. The op
advertised the param but the function destructured it as `_opts` and
queried every row. Archived sources' ids, local_paths, and remote_urls
were leaking to read-scoped MCP callers by default. Filter in SQL
(`WHERE archived IS NOT TRUE` unless the flag is set) so archived rows
never reach the wire.
PARTIAL HIGH — IPv6 ULA fc00::/7 and link-local fe80::/10 were not in
the isInternalUrl bypass list. Only ::1/:: and IPv4-mapped IPv6 were
blocked. Added regex-based ULA + link-local rejection to url-safety.ts.
Test coverage:
- test/git-remote.test.ts: 4 new IPv6 cases (ULA fc-prefix + fd-prefix,
link-local fe80::, public IPv6 still allowed).
- test/sources-mcp.test.ts: 3 new cases pinning the remote/local
asymmetry (clone_dir override silently ignored over MCP, path nulled,
local CLI keeps the override).
- test/sources-mcp.test.ts: 2 new cases for include_archived honored.
DNS rebinding (codex finding #3): the current gate is lexical only.
A deliberate attacker who controls a hostname's A/AAAA records can still
resolve to an internal IP. Closing this requires async DNS resolution +
revalidation; filed as v0.28.x follow-up in TODOS.md so the API change
surface (parseRemoteUrl becomes async, every caller updates) lands in
its own PR.
323 tests pass (9 files); 4071 unit tests pass (full suite).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore: rebump v0.28.1 → v0.28.2 (master collision)
Caught after PR creation. master is at v0.28.1 already; this branch
forked from garrytan/v0.28-release at v0.28.0 and naively bumped to
v0.28.1 without checking the master queue. CI version-gate would have
rejected at merge time (requires VERSION strictly greater than
master's).
Root cause: I bumped VERSION mechanically during plan implementation
(echo "0.28.1" > VERSION) without consulting the queue-aware allocator
at bin/gstack-next-version. /ship Step 12's idempotency check then
classified state as ALREADY_BUMPED and the workflow's "queue drift"
comparison was the safety net I should have hit — but I skipped it.
Files updated:
- VERSION + package.json: 0.28.1 → 0.28.2
- CHANGELOG.md: header + "To take advantage of v0.28.2" subsection
- README.md: sources --url note version reference
- TODOS.md: 7 follow-up entries' version references
- llms.txt + llms-full.txt: regenerated
PR title rewrite via gstack-pr-title-rewrite.sh handled in a separate
gh pr edit call; CI version-gate now passes.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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1d78013c07 |
v0.28.5 fix(wave): PGLite upgrade wedge + embedding dim corruption + bun-link foot-gun (#697)
* fix(engines): pre-add v0.20 + v0.26.3 forward-reference columns in bootstrap The forward-reference bootstrap (PostgresEngine + PGLiteEngine applyForwardReferenceBootstrap) covered v0.18 + v0.19 + v0.26.5 columns but missed two later groups. Brains upgrading from v0.14-era to current master crash before the migration ladder runs: 1. v0.20 Cathedral II — content_chunks.search_vector, parent_symbol_path, doc_comment, symbol_name_qualified. `CREATE INDEX idx_chunks_search_vector` and `CREATE INDEX idx_chunks_symbol_qualified` in schema.sql/PGLITE_SCHEMA_SQL crash with "column search_vector does not exist" / "column symbol_name_qualified does not exist". 2. v0.26.3 — mcp_request_log.agent_name, params, error_message. `CREATE INDEX idx_mcp_log_agent_time ON mcp_request_log(agent_name,...)` crashes with "column agent_name does not exist". Reproduces deterministically on a v0.13/v0.14 brain upgraded straight to current master. The user hits the wall before any of v15-v36 can run. Both engines now probe for these columns and pre-add them via `ALTER TABLE ADD COLUMN IF NOT EXISTS` before SCHEMA_SQL runs. Migrations v26, v27, v33 still run later via runMigrations and remain idempotent (they handle backfill on top of the bootstrap-added columns). Test coverage extended in test/schema-bootstrap-coverage.test.ts: REQUIRED_BOOTSTRAP_COVERAGE now lists 6 new forward references; the strip-and-rebuild block drops the corresponding indexes/triggers so the test exercises a brain that pre-dates v0.20 + v0.26.3 migrations. Repro: brain on schema v13/v14 + run `gbrain init --migrate-only` against current master → fails. With this patch → succeeds; ladder runs to v36. * fix(engines): pre-add v0.27 subagent_messages.provider_id in bootstrap PR #682 covered v0.20 (chunks) + v0.26.3 (mcp_request_log) but missed v0.27's subagent_messages.provider_id. The composite index `idx_subagent_messages_provider ON subagent_messages (job_id, provider_id)` in PGLITE_SCHEMA_SQL crashes on brains pinned at v0.18-v0.26 because provider_id is the SECOND column in the composite — array-extraction patterns that scan only first-column references miss it entirely. This is the wedge surfaced by issue #670 (v0.22.0 → v0.27.0 init --migrate-only crashes with "column 'provider_id' does not exist") and contributing to #661/#657. Both engines now probe for subagent_messages.provider_id and pre-add the column via ALTER TABLE ADD COLUMN IF NOT EXISTS before SCHEMA_SQL runs. Migration v36 (subagent_provider_neutral_persistence_v0_27) still runs later via runMigrations and remains idempotent. Note on the test side: REQUIRED_BOOTSTRAP_COVERAGE is hand-maintained and just gained a v0.27 entry. v0.28.5's Step 3 replaces this array with a SQL parser that auto-derives coverage from PGLITE_SCHEMA_SQL, including composite-index columns. This commit is the targeted follow-up to PR #682's cherry-pick; A2's parser closes the class permanently. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix(cli): conditional schema-init on connect (closes #651) Adds `hasPendingMigrations(engine)` next to `runMigrations` in migrate.ts: single getConfig('version') probe, returns true when current < LATEST_VERSION, defensively returns true on getConfig failure (treats wedged-config as pending). `connectEngine` in cli.ts now wraps `engine.initSchema()` in a probe gate: short-lived CLI calls (gbrain stats, query, doctor, etc.) on already-migrated brains skip the bootstrap-probe + SCHEMA_SQL replay + ledger-check entirely. Wedged brains still auto-heal — the probe says "yes pending" and initSchema runs as before. Building on oyi77's investigation in PR #652. Same correctness as #652's unconditional initSchema-on-every-connect, but no perf regression on the hot path. Failure non-fatal: if probe or init throws, log a hint and let subsequent operations surface the real error in context. Test coverage in test/migrate.test.ts: 3 cases covering fully-migrated (false), version-rewound (true), and missing-version-config (defensive true). Pairs with v0.28.5's X1 (post-upgrade auto-apply) — the upgrade path runs initSchema explicitly while every other code path that goes through connectEngine gets the cheap probe. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix(upgrade): post-upgrade auto-applies pending schema migrations (X1) Prior behavior: `gbrain upgrade` → `gbrain post-upgrade` → `apply-migrations` only WARNs at apply-migrations.ts:296-302 when schema version is behind LATEST_VERSION, telling the user to run `gbrain init --migrate-only`. 11 wedge incidents over 2 years have proven users don't read that WARN — they file an issue instead. This commit makes `runPostUpgrade` explicitly call `engine.initSchema()` after the orchestrator migration pass, mirroring `init --migrate-only`'s flow. Side-effect: `gbrain upgrade` now walks away with a healthy brain in the cluster A wedge case (#670, #661, #657, #651, #625, #615, #609). Defensive: wrapped in try/catch so a connection or DDL failure falls back to the existing user-facing WARN. The hint to run `gbrain init --migrate-only` is preserved as the manual escape hatch. Pairs with v0.28.5's A1 (hasPendingMigrations probe in connectEngine): the upgrade path runs initSchema explicitly here, while every other code path that goes through connectEngine gets the cheap probe. Codex outside-voice review caught this gap during plan review: "the plan still does not prove `upgrade` will actually run schema migrations." This is the load-bearing fix that makes v0.28.5's headline outcome ("run upgrade, brain works") literally true for cluster A. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test(bootstrap): auto-derive coverage from PGLITE_SCHEMA_SQL (A2) Replaces the hand-maintained REQUIRED_BOOTSTRAP_COVERAGE assertion with a SQL-parser-backed structural check. The new test: 1. parseIndexColumnReferences(PGLITE_SCHEMA_SQL) extracts every column referenced by every CREATE INDEX — including composite-index second and third columns. Codex outside-voice review caught that earlier first-col-only patterns missed v0.27's `idx_subagent_messages_provider ON subagent_messages (job_id, provider_id)`, which is exactly how the v0.28.5 wedge happened. 2. parseBaseTableColumns(PGLITE_SCHEMA_SQL) extracts every column declared in CREATE TABLE bodies (including via ALTER TABLE ADD COLUMN inside the schema blob). 3. parseAlterAddColumns(pglite-engine.ts source) extracts every column that applyForwardReferenceBootstrap adds. 4. Static contract: every (table, column) pair from step 1 must appear in either step 2 or step 3. Otherwise the test fails loud, names every uncovered pair, and points at the bootstrap function for the fix. Self-updating: any future CREATE INDEX added to PGLITE_SCHEMA_SQL on a column that bootstrap doesn't yet provide fails this test at PR time. No human required to remember to update an array. Closes the 11-incident wedge class identified in CLAUDE.md (#239, #243, #266, #357, #366, #374, #375, #378, #395, #396). Helper parsers also have their own unit tests covering composite-index second columns, function-wrapped columns (lower(col)), HNSW operator-class suffixes (vector_cosine_ops), and ALTER TABLE column extraction. Existing REQUIRED_BOOTSTRAP_COVERAGE-based tests preserved as a coarse-grained lower bound; the new parser-based test is the load-bearing structural gate going forward. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: support Voyage 2048d schema setup * fix: harden Voyage schema templating * feat: Voyage 4 embedding support + doctor eval - Add voyage-4-large/4/4-lite/4-nano + domain models to Voyage recipe - Fix AI SDK compatibility: strip encoding_format (Voyage rejects 'float'), patch response to add prompt_tokens from total_tokens - Add embedding_provider doctor check: live smoke test verifying model, API key, dimensions, and DB column alignment - Add embedding provider eval qrels for post-migration quality testing Closes: Voyage AI integration for gbrain embedding pipeline * fix: adaptive embed batch sizing for Voyage token limits Voyage's tokenizer is 3-4x denser than OpenAI tiktoken, causing batches of 50+ texts to exceed the 120K token-per-batch limit even when DB token counts (from tiktoken) suggest they'd fit. Changes: - Add max_batch_tokens to EmbeddingTouchpoint type (provider-declared limit) - Set Voyage recipe to 120K token limit - Gateway embed() now auto-splits batches using conservative char-to-token estimate (1:1 ratio, 80% budget utilization) - On token-limit errors, embedSubBatch recursively halves and retries (down to single-text batches before giving up) - Reduce embedding.ts BATCH_SIZE from 100 to 50 as a secondary guard - Add tests for batch splitting logic and error pattern matching Fixes infinite retry loops where the same oversized batch would fail repeatedly because WHERE embedding IS NULL re-fetches identical rows. * fix(init): error on existing-brain dim mismatch + embedding-migration recipe Adds A4 hard-error path: when `gbrain init --embedding-dimensions N` is run against an existing brain whose `content_chunks.embedding` column is a different `vector(M)`, init exits 1 with an inline four-step ALTER recipe and a pointer to docs/embedding-migrations.md. This kills the silent-corruption pattern surfaced by issue #673: the v0.27 schema seeded `('embedding_dimensions', '1536')` regardless of the flag, so users got a config saying 768 but a column at 1536 — first sync write blew up with "expected 1536, got 768." A4's contract: 1. Connect to engine BEFORE saveConfig so we can read the live column type 2. If column exists AND dim != requested, exit 1 (loud failure) 3. If column doesn't exist (fresh init) OR dim matches, proceed normally Recipe in docs/embedding-migrations.md (and inlined in init's error output) covers all four destructive steps codex's plan-review caught: 1. DROP INDEX IF EXISTS idx_chunks_embedding (HNSW won't survive ALTER) 2. ALTER TABLE content_chunks ALTER COLUMN embedding TYPE vector(N) 3. UPDATE content_chunks SET embedding = NULL, embedded_at = NULL 4. CREATE INDEX HNSW *only if N <= 2000* (pgvector cap) Step 4 is conditional: dims > 2000 (e.g. Voyage 4 Large 2048d) cannot be HNSW-indexed in pgvector; the recipe explicitly says "Skip reindex" in that case so the user doesn't paste a CREATE INDEX that crashes. Helper `readContentChunksEmbeddingDim` and message builder `embeddingMismatchMessage` live in src/core/embedding-dim-check.ts so doctor 8b (next commit) can reuse the same source of truth. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix(gateway): correct dim-mismatch error to point at manual ALTER recipe (#672) Previous error message recommended running `gbrain migrate --embedding-model … --embedding-dimensions …`, but `gbrain migrate` only handles engine migration (postgres ↔ pglite), not embedding reconfiguration. Following that hint produced a different error and confused users further. New message: - Names the actual options: change models OR migrate the existing brain - Inlines a one-line quick recipe (DROP INDEX → ALTER → UPDATE NULL → config set → embed --stale) - Points at docs/embedding-migrations.md (added in commit |
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e744eda66c |
v0.28.3 feat(recipes): restart-sweep — detect dropped Telegram messages after gateway restarts (#675)
* feat(recipes): add restart-sweep — detect dropped messages after gateway restarts
Adds a tool to detect Telegram messages dropped during OpenClaw gateway restarts
by analyzing session state patterns.
Features:
- Detects sessions with abortedLastRun flag (primary heuristic)
- Identifies timing gaps (active before restart, silent after)
- Configurable alert modes (Telegram, stdout)
- Environment-based configuration
- Comprehensive test suite
- PII-scrubbed for public use
The tool addresses webhook message loss that occurs when the gateway restarts
while messages are in-flight. Unlike long-polling, webhooks cannot replay
missed messages, making this detection crucial for production reliability.
* feat(recipes): reshape restart-sweep into single .md recipe + harden script
Reshape the directory-shaped recipes/restart-sweep/ into a single
self-contained recipes/restart-sweep.md with the (fixed) script inlined
as a fenced code block. The recipe loader at integrations.ts:445-485 only
discovers *.md, so the directory shape was invisible.
Eight script fixes:
1. Newline double-escape ('\\n' → '\n') at 8 sites
2. Hard-coded /tmp/ paths → ~/.gbrain/integrations/restart-sweep/ (honors
GBRAIN_HOME); bootstrap-log path env-overridable via OPENCLAW_BOOTSTRAP_LOG
3. exec() of interpolated string → execFile with argv array (no shell)
4. Idempotency: loadAlerted/saveAlerted helpers, atomic tmp+rename, corrupt-
JSON recovery, 30-day prune
5. Aggressive heuristic gated behind OPENCLAW_RESTART_SWEEP_AGGRESSIVE=1
(default OFF — false-positive prone during quiet periods)
6. Old directory shape removed
7. Env reads moved from module top-level to constructor (fixes the import-
time-snapshot bug that made tests semantically bogus)
8. Cooldown layer keyed on (sessionKey, lastAlertedAt) with 6h re-alert
threshold — prevents re-alerting forever when the bootstrap log is
missing and restartTime is synthesized fresh each run
Recipe body adds a Cron environment troubleshooting section with the
wrapper-script pattern (set -a; source .env; set +a; exec node ...) plus
explicit PATH= line for the cron entry. Plus a TODO line pointing at
docs/guides/plugin-handlers.md as the v2 upgrade path (registered Minion
handler in the openclaw repo for queue-backed idempotency).
Tests: 27 bun:test cases (12 ported + 14 new + 1 sentinel-shape guard).
The extractor anchors on <!-- restart-sweep:script --> sentinel and salts
the tmp filename to bypass the ESM import cache. A separate test asserts
the sentinel itself is present so future doc edits dropping it fail loud.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore: bump version and changelog (v0.28.3)
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: sync README + CLAUDE.md for v0.28.3 restart-sweep recipe
- README.md: add restart-sweep row to "Getting Data In" recipes table
- CLAUDE.md: add test/restart-sweep.test.ts to the unit-test inventory
- llms-full.txt: regenerated via bun run build:llms
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: garrytan-agents <garrytan-agents@users.noreply.github.com>
Co-authored-by: Garry Tan <garrytan@gmail.com>
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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cb02932388 |
v0.26.9 fix(oauth): RFC 6749 hardening + close HTTP MCP shell-job RCE (#628)
* fix(mcp): close HTTP MCP shell-job RCE + tighten remote contract
The HTTP MCP transport in serve-http.ts inlined its own OperationContext
literal and forgot to set `remote: true`. With the field undefined at the
operations.ts protected-job-name guard (line 1391), an HTTP MCP caller
holding a write-scoped OAuth token could submit `submit_job {name: "shell"}`
and execute arbitrary commands on the gbrain host (RCE-class).
Two-layer fix:
1. F7 — explicit `remote: true` on the inlined /mcp OperationContext.
Stdio MCP at src/mcp/dispatch.ts:61 already set this; the HTTP path
was the regression.
2. F7b — fail-closed contract on the four ctx.remote consumer sites in
operations.ts (auto-link skip, telemetry x2, protected-job guard).
The protected-job guard flips from `if (ctx.remote && ...)` to
`if (ctx.remote !== false && ...)` and the trusted-marker site flips
from `!ctx.remote && ...` to `ctx.remote === false && ...`. Anything
that isn't strictly `false` now treats the caller as remote/untrusted.
3. D12 — `OperationContext.remote` becomes REQUIRED in the TypeScript
type. The compiler now catches future transports that forget the field.
The runtime fail-closed defaults are belt+suspenders for any caller
that bypasses the type via `as` cast or `Partial<>` spread.
Tests:
- New `test/trust-boundary-contract.test.ts` (4 cases) pins the
fail-closed semantics: undefined-via-cast rejects, remote=true rejects,
remote=false allowed (only path that escalates protected-name jobs).
- `test/e2e/serve-http-oauth.test.ts` adds 2 cases asserting HTTP MCP
cannot submit `shell` or `subagent` jobs even with read+write scope.
- `test/e2e/graph-quality.test.ts` adds the now-required `remote: false`
to its fixture (e2e graph quality simulates local-CLI writes).
Verification: bun test -> 3742 pass / 0 fail. typecheck clean.
Thanks to @ElectricSheepIO on X for the security review that surfaced
this trust-boundary regression.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix(oauth): RFC 6749 hardening + serve-http defense in depth
OAuth provider hardening pass that brings the provider into RFC compliance
on auth code, refresh token, and revocation flows, and tightens the
serve-http surface around request logging and admin cookies.
Provider (src/core/oauth-provider.ts):
- F1: bind client_id atomically into the auth code DELETE WHERE clause for
exchangeAuthorizationCode + challengeForAuthorizationCode. Previous
pattern (DELETE...RETURNING then post-hoc client compare) burned codes
on the wrong-client path so the legitimate client could not retry.
RFC 6749 §10.5.
- F2: same atomic predicate on exchangeRefreshToken. The pre-fix shape
defeated RFC 6749 §10.4's stolen-token detection by letting attacker +
victim both succeed.
- F3: refresh token rejects requested scopes that are not a subset of the
ORIGINAL grant on the row. Codex C9: subset is checked against the
recorded grant, not the client's currently-allowed scopes (which can
expand later); omitted scope inherits the original verbatim and stays
distinct from explicit-empty. RFC 6749 §6.
- F4: revokeToken adds AND client_id to the DELETE so a client cannot
revoke another client's tokens by guessing the hash. RFC 7009 §2.1.
- F5: deleted_at and token_ttl column probes use a new
isUndefinedColumnError helper (extracted to src/core/utils.ts per D14)
that matches SQLSTATE 42703 or column-name-in-message. Bare catch{}
used to swallow lock timeouts, network blips, and auth failures as
"column missing" — fail-open posture in a security path.
- F6: sweepExpiredTokens uses RETURNING 1 + array length. Pre-fix
(result as any).count returned 0 on at least one engine even when
rows were deleted, and codes were never counted.
- F7c: NEW finding eva-brain missed. exchangeAuthorizationCode now folds
redirect_uri into the atomic DELETE predicate when the parameter is
provided. Stored on /authorize, never compared on /token before this
commit. RFC 6749 §4.1.3 violation. Back-compat: when caller omits the
parameter the predicate is skipped, preserving SDK consumers that
haven't adopted the parameter yet.
- F12 (cleanup, not security): dcrDisabled constructor option replaces
the prior monkey-patch of _clientsStore in serve-http.ts. The SDK's
mcpAuthRouter only wires up /register when the store exposes
registerClient, so omitting the method via the constructor is
sufficient. Reframed as cleanup per codex C10 — the monkey-patch
happened before mcpAuthRouter ran, so the prior shape did not have
a real security regression to claim.
Dispatch (src/mcp/dispatch.ts):
- F8: new summarizeMcpParams(opName, params) intersects submitted keys
against the operation's declared params allow-list. Returns
{redacted, kind, declared_keys, unknown_key_count, approx_bytes}.
Closes the codex C8 leak: a naive "dump all submitted keys" summary
still echoed attacker-controlled key names like
put_page {"wiki/people/sensitive_name": "..."} into mcp_request_log
+ the SSE feed. Allow-list pattern keeps debug visibility on declared
keys while counting unknowns without naming them.
Serve-http (src/commands/serve-http.ts) + serve (src/commands/serve.ts):
- F8 wiring: mcp_request_log + SSE broadcast routed through
summarizeMcpParams by default. New --log-full-params flag bypasses
redaction with a loud stderr warning at startup. Default privacy-
positive; flag is the documented escape hatch for self-hosted
operators debugging on their own laptop.
- F9: admin cookies set Secure when req.secure OR issuerUrl.protocol
is https. Cloudflare-tunnel + reverse-proxy deployments where the
inside-tunnel hop looks like http but the public URL is https now
tag cookies correctly.
- F10: bound magicLinkNonces with NONCE_LRU_CAP. Previously only the
consumed-nonces map was capped; an attacker (or misbehaving agent)
with the bootstrap token could mint nonces faster than they expired
and grow the live store unbounded.
- F12: dcrDisabled flows through to the provider constructor instead of
monkey-patching _clientsStore after construction.
- F14: try/catch wraps StreamableHTTPServerTransport setup +
handleRequest. SDK-level throws no longer fall through to express's
default HTML error page; clients expecting JSON-RPC envelopes get a
JSON 500 instead.
- F15: error envelope unified via buildError + serializeError from
src/core/errors.ts. OperationError and unexpected exceptions both
emit the same {class, code, message, hint} shape so clients can
pattern-match a single envelope.
Tests:
- test/oauth.test.ts adds 11 cases:
* F1+F2 wrong-client cannot consume / read PKCE / burn refresh,
paired with owner-still-redeems atomically afterward (codex D6 —
proves the predicate doesn't burn the row on attacker attempts).
* F3 refresh scope subset enforced.
* F4 wrong-client cannot revoke.
* F5 non-schema SQL not swallowed by client_credentials soft-delete probe.
* F6 sweepExpiredTokens returns count > 0 after deleting rows.
* F7c redirect_uri match succeeds, mismatch rejects, omitted preserves
back-compat for callers that don't pass the parameter.
* F12 dcrDisabled constructor option exposes only getClient,
registerClientManual still works.
- test/mcp-dispatch-summarize.test.ts (NEW, 6 cases): pins the F8
privacy invariants. The codex-C8 attacker-key-name probe asserts that
a sensitive name submitted as a key never appears anywhere in the
redactor's output.
Verification: bun run typecheck clean. test/oauth.test.ts 55/55,
test/mcp-dispatch-summarize.test.ts 6/6,
test/trust-boundary-contract.test.ts 4/4 from commit A. The one
unrelated unit failure surfaces on master too — environment-sensitive
test that expects ~/.gbrain/config.json to be absent in the test env.
Out of scope: F11 (auth register-client --redirect-uri flag) and F13
(serve --http argv positive-int validator) per codex C11 — operator
UX gaps, not trust-boundary fixes. Filed as follow-up TODOs.
Thanks to @ElectricSheepIO on X for the security review that surfaced
this hardening pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore: file F11 + F13 as OAuth hardening follow-up TODOs
Codex C11 flagged these as scope creep on the v0.26.7 OAuth hardening
PR (operator UX, not trust-boundary). Capturing them here so the
context survives — eva-brain has both implementations and the lift is
mechanical when we want to do them.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix(oauth): close adversarial-review findings on F7c + F8
Two bugs surfaced by an adversarial subagent during /ship's pre-landing
review pass that the codex + plan-eng-review didn't catch.
D15 / F7c: `exchangeAuthorizationCode` used `redirectUri ? ...` ternary
to choose the with-redirect vs no-redirect SQL. Empty string fell
through to the no-redirect branch, so a caller submitting
`redirect_uri=""` at /token bypassed the binding entirely. RFC 6749
§4.1.3 spec violation. Switch to `redirectUri !== undefined`. Test:
empty-string redirect_uri must reject when /authorize stored a real URI.
D16 / F8: `summarizeMcpParams` published exact byte length via
`approx_bytes = JSON.stringify(params).length`. Submitting put_page with
a known prefix and observing the resulting log entry across repeated
probes lets an attacker binary-search the size of secret suffix content.
Bucket to 1KB resolution. The redacted summary keeps a coarse
"roughly how big" signal for operators while making size-based
side-channel attacks useless.
Test count: 65 → 67 across the three new test files.
Typecheck clean.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore: bump version and changelog (v0.26.9)
OAuth 2.1 hardening + HTTP MCP shell-job RCE fix.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: update project documentation for v0.26.9
Annotate CLAUDE.md key-files entries with v0.26.9 OAuth/MCP hardening pass:
- src/core/operations.ts: D12 (OperationContext.remote required) + F7b
(4-site fail-closed flip), HTTP MCP shell-job RCE close
- src/core/utils.ts: D14 isUndefinedColumnError extracted helper
- src/mcp/dispatch.ts: F8 summarizeMcpParams privacy redactor with
declared-keys allow-list + 1KB byte bucketing
- src/commands/serve-http.ts: F7+F8+F9+F10+F12+F14+F15 hardening
- src/core/oauth-provider.ts: F1+F2+F3+F4+F5+F6+F7c+F12 RFC 6749/7009
hardening pass
Add new test-file entries for test/mcp-dispatch-summarize.test.ts
(7 cases) and test/trust-boundary-contract.test.ts (4 cases). Extend
test/oauth.test.ts (+14 cases) and test/e2e/serve-http-oauth.test.ts
(+2 RCE-close regressions) entries with v0.26.9 case counts.
README.md: added --log-full-params to gbrain serve --http surface.
SECURITY.md: documented mcp_request_log.params redaction default
({redacted, kind, declared_keys, unknown_key_count, approx_bytes}) +
--log-full-params opt-in.
docs/mcp/DEPLOY.md: operator-facing note on SSE feed + audit log
redaction default and when to flip --log-full-params on.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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058fe69575 |
v0.26.7 test: isolation foundation (helpers + lint + quarantine) (#613)
* test: add withEnv helper + canonical PGLite block JSDoc withEnv(overrides, fn) saves prior values, runs the callback, restores via try/finally — including on throw. Handles delete via undefined override. Nested calls compose. Cross-test safe; explicitly NOT intra-file concurrent-safe (process.env is process-global). 7 unit cases covering sync, async, delete-key, delete-when-prior-unset, restore-on-throw, nested compose, multi-key atomic restore. reset-pglite.ts JSDoc extended with the canonical 4-line PGLite block (beforeAll create + afterAll disconnect + beforeEach reset). The lint script in the next commit enforces this exact shape. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test: add check-test-isolation lint script + wire into verify Grep-based lint enforcing 4 rules on non-serial unit test files: R1: no process.env mutations (use withEnv() or rename to *.serial.test.ts) R2: no mock.module() (rename to *.serial.test.ts) R3: new PGLiteEngine( only inside beforeAll() context R4: PGLiteEngine creators must pair with afterAll{disconnect} Wired into 'bun run verify' and 'bun run check:all' (NOT 'bun run test' which is the parallel runner script with no pre-check chain). Matches the existing scripts/check-*.sh family shape (jsonb, progress, etc). 51 baseline violators captured in scripts/check-test-isolation.allowlist. List MUST shrink over time — entries removed by v0.26.8 (env sweep) and v0.26.9 (PGLite sweep). New files cannot be added. CLAUDE.md ## Testing section extended with R1-R4 rules table, the canonical 4-line PGLite block, withEnv pattern, and when-to-quarantine guidance. 16 fixture-driven test cases for the lint: clean, R1 (5 patterns + 1 negative), R2, R3 (top-level vs in-beforeAll), R4 (missing disconnect), *.serial.test.ts skip, test/e2e/ skip, allowlist (3 cases). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test: quarantine cycle and embed mock.module test files Both files use mock.module(...) at top level — leaks across files in the same shard process. The check-test-isolation lint (R2) bans this pattern in non-serial files; quarantine is the escape hatch. Per v0.26.7 plan D5: prefer quarantine over DI on runCycle/runEmbed. Production signatures stay frozen; tests run at --max-concurrency=1 in the serial post-pass (the existing pattern shipped in v0.26.4 for brain-registry and reconcile-links). Quarantine count: 2 → 4. Cap raised to 10 informational per D15. Renames: test/core/cycle.test.ts → test/core/cycle.serial.test.ts test/embed.test.ts → test/embed.serial.test.ts Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: bump version and changelog (v0.26.7) Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: post-ship documentation sync for v0.26.7 - README.md "Contributing" line: point to bun run test + bun run verify (parallel fast loop) - CONTRIBUTING.md "Running tests": rewrite for the v0.26.4/v0.26.7 test surface (parallel runner, verify, slow/serial/e2e tiers) - CONTRIBUTING.md adds "Writing tests that survive the parallel loop" section: R1-R4 lint, canonical PGLite block, withEnv pattern, when to quarantine - llms-full.txt regenerated to pick up the README + CONTRIBUTING changes Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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1055e10c23 |
v0.26.2 fix(oauth): bun execSync env inheritance + BIGINT-as-string bug class (#593)
* feat(oauth): add coerceTimestamp helper + fix BIGINT-as-string bug class
Postgres-js with prepare:false (auto-detected on Supabase pooler / port
6543) returns BIGINT columns as strings. Two surfaces broke on this:
(1) MCP SDK's bearerAuth checks typeof === 'number' and rejected
strings — fixed in v0.26.1 only at line 303 of oauth-provider.ts;
(2) RFC 7591 §3.2.1 requires client_id_issued_at and
client_secret_expires_at to be JSON numbers in DCR responses, not
strings — latent until v0.26.2.
Adds module-private coerceTimestamp() at the SELECT-row → JS-number
boundary. Throws on non-finite (corrupt rows fail loud, not as
fake-valid expiresAt: NaN flowing into the SDK). Returns undefined for
SQL NULL — schema permits NULL on oauth_tokens.expires_at, callers
treat NULL as expired (fail-closed) at comparison sites and preserve
undefined in DCR getClient response per RFC 7591.
Refactors 5 sites:
- L112,113 (getClient) — DCR response numeric-shape compliance.
- L274 (exchangeRefreshToken) — NULL→expired fail-closed contract.
- L296,303 (verifyAccessToken) — single guard, narrowed return.
No `!` non-null assertions: all 5 sites read nullable BIGINT columns
per src/schema.sql:362,363,372. The L296/L303 cleanup also folds in
v0.26.1's inline Number(...) at L303.
* feat(auth): add gbrain auth revoke-client subcommand
Hard-deletes the matching oauth_clients row via atomic
DELETE ... RETURNING. Schema-level FK CASCADE on oauth_tokens.client_id
and oauth_codes.client_id (src/schema.sql:370,382) purges all dependent
rows in the same transaction. No manual delete of dependents needed.
Exit 1 on no-such-client (idempotent: re-running on the same id
produces the same error). Operator-friendly output: prints the client
name + cascade confirmation, no race-prone pre-delete count.
Closes the v0.26.1 process miss where test/e2e/serve-http-oauth.test.ts
afterAll already called this subcommand — silently failing because the
subcommand didn't exist. With this fix, E2E cleanup actually purges
test clients.
* test(oauth): v0.26.2 regression coverage + bun execSync env fix
Unit additions in test/oauth.test.ts:
- 5 cases pinning coerceTimestamp contract (null/undef/string/number/
throws-on-NaN). The throws-on-NaN case is load-bearing: pre-v0.26.2
Number(corrupt) → NaN, NaN < now is false → expired check skipped,
fake-valid expiresAt:NaN flowed to SDK. Now fail-closed.
- NULL expires_at on oauth_tokens insert → verifyAccessToken throws
"Token expired". Schema permits NULL; pre-v0.26.2 hand-modified rows
could ride past validation.
- Cascade-deleted client → previously-minted token fails
verifyAccessToken with "Invalid token" (not "expired"). Pins the
cascade contract independently of the CLI subprocess path.
E2E additions in test/e2e/serve-http-oauth.test.ts:
- DCR /register HTTP-level response-shape test. Spawns server with
--enable-dcr, POSTs a client manifest, asserts typeof === 'number'
on client_id_issued_at and (when present) client_secret_expires_at
per RFC 7591 §3.2.1. Replaces the v0.26.1 plan's internal-store-only
test that Codex flagged as the wrong seam.
- Real CLI subprocess test for revoke-client: register → mint token →
revoke via execSync → assert token rejected at /mcp + cascade
invalidation visible + re-run exits 1 with "No client found".
- afterAll guards on clientId so pre-registration beforeAll failures
surface cleanly instead of throwing on undefined during cleanup.
Also tracks DCR-registered clients alongside the manual one.
- Server fixture: --enable-dcr added so /register is reachable.
- Health endpoint: page_count assertion loosened from > 0 to >= 0
+ typeof number — pre-v0.26.2 broke on fresh-schema E2E runs.
bun execSync env-inheritance fix (the load-bearing infrastructure
fix that unbroke v0.26.2's full-suite test):
- bun's child_process.execSync does NOT inherit env mutations done
via process.env.X = ...; only OS-level env from before bun started.
- helpers.ts loads .env.testing and sets DATABASE_URL via process.env
mutation, invisible to subprocesses unless env: { ...process.env }
is passed explicitly.
- All 4 execSync calls in this file (beforeAll register-client,
afterAll revoke-client, in-test register-client, in-test
revoke-client x2) now pass env: { ...process.env }.
- Without this, full bun test suite OAuth E2E fails with "Set
DATABASE_URL or GBRAIN_DATABASE_URL environment variable" even when
isolated test/e2e/serve-http-oauth.test.ts runs pass. Pattern is
documented inline as a reference for other E2E test fixes (see
TODOS.md "test infra (v0.26.2 follow-up)" for the 22-test backlog).
* build: commit admin/dist + remove gitignore exclusion
CLAUDE.md (admin/ section, v0.26.0 release notes) states:
"output at admin/dist/ is committed for self-contained binaries"
But .gitignore excluded admin/dist/, so the bun --compile binary that
embeds the admin SPA via `import path from '...' with { type: 'file' }`
couldn't resolve in fresh clones. PR #577 (v0.26.1) didn't catch this
because admin tests pass when admin/dist exists locally.
Removes the .gitignore line + commits the current 220KB build:
- index.html (0.7KB)
- assets/index-{hash}.js (210KB / 65KB gzip)
- assets/index-{hash}.css (6.3KB / 1.8KB gzip)
Now `bun build --compile --outfile bin/gbrain src/cli.ts` works on a
fresh clone without a separate `cd admin && bun install && bun run
build` step in CI.
* docs: capturing test output rule + regen llms-full.txt
Adds a CLAUDE.md section "Capturing test output (NEVER pipe through
tail / head)" documenting the iron rule that bit v0.26.2's ship:
bun test 2>&1 | tail -10 → exit code = tail's (always 0),
failures truncated, ship gates fail open
The pipe form silently breaks /ship Step T1 (test failure ownership
triage) because $? after a pipe is the LAST command's exit code, and
bun prints failure details before the summary line so tail -N drops
them. v0.26.2's first ship attempt reported "3911 pass / 23 fail" but
no failure details survived, forcing a 23-minute re-run to triage.
Right pattern: redirect to a file first, then tail the file separately.
Regenerates llms-full.txt to match the new CLAUDE.md content (drift
guard at test/build-llms.test.ts enforces this).
* docs: P0 TODO for 22 pre-existing test failures unrelated to OAuth
Captures the test-infra backlog uncovered by v0.26.2's full bun test
run. None of the 22 failing cases touch the OAuth diff:
- 12 Git-to-DB Sync Pipeline cases (state-machine drift)
- 3 multi-source cascade + sync routing cases
- E2E sync-parallel, sync --skip-failed, doctor, dream, runCycle,
claw-test fresh-install, BrainRegistry lazy init
Likely root causes for several: same bun execSync env-inheritance
pattern fixed in test/e2e/serve-http-oauth.test.ts during v0.26.2
(documented in the TODO + the inline test comment for the next
maintainer to find).
Separating from v0.26.2 keeps the OAuth ship focused on the bug
class it was scoped for. Fix-wave deserves its own PR.
* chore: bump to v0.26.2 + CHANGELOG
VERSION 0.26.0 → 0.26.2. Includes a retroactive v0.26.1 entry above
v0.26.0 because PR #577 shipped its three fixes (oauth-provider:303
Number cast, OAuth metadata interceptor, Express 5 trust proxy +
admin wildcard) without bumping VERSION/package.json/CHANGELOG —
this branch catches the changelog up to commit history.
v0.26.2 release-summary covers the OAuth string-vs-number bug class
fix (5 sites + coerceTimestamp helper), the gbrain auth revoke-client
subcommand landing as a real CLI, and the bun execSync env-inheritance
fix that unblocked full-suite E2E OAuth tests.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: post-ship updates for v0.26.2
- CLAUDE.md src/core/oauth-provider.ts: append v0.26.2 coerceTimestamp boundary helper note (5 call sites, NULL semantics, throw-on-NaN posture, intentionally module-private)
- CLAUDE.md src/commands/auth.ts: add v0.26.2 revoke-client subcommand with FK CASCADE cleanup
- CLAUDE.md test/oauth.test.ts: bump v0.26.2 case additions (5 coerceTimestamp + NULL-expires_at + cascade-delete contract)
- CLAUDE.md test/e2e/serve-http-oauth.test.ts: new entry covering v0.26.0 + v0.26.2 expansion (DCR HTTP-level test, CLI subprocess revoke-client test, bun execSync env-inheritance fix as reference for sibling E2Es)
- README.md: add gbrain auth revoke-client to command list
- llms-full.txt: regenerate after CLAUDE.md edits
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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3c032d79ec |
v0.26.0 feat: GBrain — MCP Keys OAuth 2.1 + HTTP server + admin dashboard (#358)
* feat: OAuth 2.1 schema tables + shared token utilities
Add oauth_clients, oauth_tokens, oauth_codes tables to both PGLite and
Postgres schemas. Migration v5 creates tables for existing databases.
PGLite now includes auth infrastructure (access_tokens, mcp_request_log,
OAuth tables) because `serve --http` makes it network-accessible.
Extract hashToken() and generateToken() to src/core/utils.ts for DRY
reuse across auth.ts and oauth-provider.ts.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* feat: GBrainOAuthProvider — MCP SDK OAuthServerProvider implementation
Implements OAuthServerProvider backed by raw SQL (PGLite or Postgres).
Supports client credentials, authorization code with PKCE, token refresh
with rotation, revocation, and legacy access_tokens fallback.
Key decisions from eng review:
- Uses raw SQL connection, not BrainEngine (OAuth is infrastructure)
- All tokens/secrets SHA-256 hashed before storage
- Legacy tokens grandfathered as read+write+admin
- sweepExpiredTokens() wrapped in try/catch (non-blocking startup)
- Client credentials: no refresh token per RFC 6749 4.4.3
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* feat: scope + localOnly annotations on all 30 operations
Add AuthInfo, scope ('read'|'write'|'admin'), and localOnly fields to
Operation interface. Per-operation audit:
- 14 read ops, 9 write ops, 2 admin ops, 4 admin+localOnly ops
- sync_brain, file_upload, file_list, file_url: admin + localOnly
- Scope enforcement happens in serve-http.ts before handler dispatch
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* feat: HTTP MCP server with OAuth 2.1 + 27 OAuth tests
gbrain serve --http starts Express 5 server with:
- MCP SDK mcpAuthRouter (authorize, token, register, revoke endpoints)
- Custom client_credentials handler (SDK doesn't support CC grant)
- Bearer auth + scope enforcement on /mcp tool calls
- Admin dashboard auth via HTTP-only cookie + bootstrap token
- SSE live activity feed at /admin/events
- DCR default OFF (--enable-dcr to enable)
- Rate limiting on /token (50/15min)
- localOnly operations excluded from HTTP
CLI: gbrain serve --http [--port 3131] [--token-ttl 3600] [--enable-dcr]
Dependencies: express@5.2.1, express-rate-limit@7.5.1, cors@2.8.6
SDK pinned to exact 1.29.0 (was ^1.0.0)
27 new tests covering OAuth provider, scope enforcement, auth code flow,
refresh rotation, token revocation, legacy fallback, and sweep.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* feat: React admin dashboard — 7 screens, dark theme, Krug-designed
Admin SPA at /admin with client-side routing (#login, #dashboard,
#agents, #log). Built with Vite + React, served from admin/dist/.
Screens:
- Login: one field, one button, zero happy talk
- Dashboard: metrics bar, SSE live activity feed, token health panel
- Agents: table with scopes/badges, + Register Agent button
- Register: modal form (name, scopes), 3 mindless choices
- Credentials: full-screen modal, copy buttons, download JSON, warning
- Request Log: paginated table (50/page), time-relative timestamps
- Agent Detail: slide-out drawer, config export tabs (Perplexity/Claude/JSON)
Design tokens: #0a0a0f bg, Inter + JetBrains Mono, 4-32px spacing.
Build: bun run build:admin (Vite, 65KB gzipped).
Admin API: /admin/api/register-client endpoint for dashboard registration.
SPA serving: Express static + index.html fallback for client-side routing.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* chore: add admin SPA lockfile
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* chore: bump version and changelog (v1.0.0.0)
Milestone release: multi-agent GBrain with OAuth 2.1, HTTP server,
and React admin dashboard. See CHANGELOG.md for details.
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* docs: update project documentation for v1.0.0.0
Sync README, CLAUDE.md, and docs/mcp/ with the OAuth 2.1 + HTTP server
+ admin dashboard surface that shipped in v1.0.0.0.
- README.md: new "Remote MCP with OAuth 2.1" section covering
gbrain serve --http, admin dashboard, scoped operations, legacy
bearer fallback; add serve --http + auth notes to the commands
reference.
- CLAUDE.md: add src/commands/serve-http.ts, src/core/oauth-provider.ts,
admin/ directory as key files; document scope + localOnly additions
to Operation contract; add oauth.test.ts (27 cases) to the test list;
add v1.0.0 key-commands section clarifying that OAuth client
registration is via the /admin dashboard or SDK (no CLI subcommand).
- docs/mcp/DEPLOY.md: promote --http as the recommended remote path,
add OAuth 2.1 Setup section, list ChatGPT in supported clients,
remove the "not yet implemented" footer.
- docs/mcp/CHATGPT.md (new): unblocks the P0 TODO. Full ChatGPT
connector setup via OAuth 2.1 + PKCE.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat: wire gbrain auth subcommand with OAuth register-client
Previously auth.ts was a standalone script invoked via
`bun run src/commands/auth.ts`. CHANGELOG and README documented
`gbrain auth ...` commands that didn't actually work.
- Export `runAuth(args)` from auth.ts (keeps standalone entry intact
via `import.meta.url === file://${process.argv[1]}` check)
- Add `auth` to CLI_ONLY + dispatch in handleCliOnly
- New subcommand `gbrain auth register-client <name> [--grant-types]
[--scopes]` wraps GBrainOAuthProvider.registerClientManual
- Lazy DB check: only subcommands that need DATABASE_URL error out
Now the documented CLI flow works end to end:
gbrain auth register-client perplexity --grant-types client_credentials --scopes "read write"
gbrain serve --http --port 3131
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
* docs: reflect wired gbrain auth register-client CLI
After /ship, the doc subagent wrote docs assuming `gbrain auth
register-client` did not exist (it said so explicitly in CLAUDE.md:184).
A follow-up commit (
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c2ae4dbfc5 |
v0.25.1 feat: book-mirror flagship + 8 research skills + skillpack uninstall + post-install advisory (#566)
* v0.25.1 foundation: scaffolds + manifests + filing-doctrine update
Foundation commit for v0.25.1 skills wave (book-mirror flagship + 8 research
pairings). All content is scaffold-stage; subsequent commits port wintermute
SKILL.md content into pure gbrain idiom.
Version bumps:
- VERSION 0.24.0 -> 0.25.1
- package.json: version + engines.bun >= 1.3.10 (D14 PTY harness)
- openclaw.plugin.json inner version 0.19.0 -> 0.25.1
- bun.lock refreshed
9 skill scaffolds via `gbrain skillify scaffold` (frontmatter + RESOLVER row +
routing-eval seed): book-mirror, article-enrichment, strategic-reading,
concept-synthesis, perplexity-research, archive-crawler, academic-verify,
brain-pdf, voice-note-ingest. Stub .mjs scripts and stub .test.ts files
deleted; these are pure-markdown skills, not deterministic-script skills.
Real tests will return when src/commands/book-mirror.ts and the other
runtime pieces land.
skills/manifest.json + openclaw.plugin.json skills[]: 9 new entries
(codex T6 fix; required by test/skillpack-sync-guard.test.ts).
D13 filing-doctrine update:
- skills/_brain-filing-rules.md: carve out media/<format>/<slug> as a
sanctioned exception for sui-generis synthesized output.
- skills/_brain-filing-rules.json: add media/books/ and media/articles/
as `synthesis-output` kind, distinct from raw-ingest filing.
- skills/media-ingest/SKILL.md: refine anti-pattern callout to clarify
that format-prefixed paths are anti-pattern for raw ingest only,
sanctioned for one-of-one synthesis.
Privacy guard hardening (codex T7):
- scripts/check-privacy.sh: extended for /data/brain/ and
/data/.openclaw/ wintermute-specific path patterns. 7 historical
files allow-listed (frozen migrations, test fixtures, env-var
fallbacks). PRIVACY OK passes.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.25.1 book-mirror: trusted CLI with read-only subagent fan-out
Implements `gbrain book-mirror` per the locked v0.25.1 plan (D2/α + codex
HIGH-1 fix). Closes the prompt-injection vector codex flagged on the
earlier `allowedSlugPrefixes: ['media/books/*', 'people/*']` design by
narrowing the trust contract at the tool-allowlist layer instead.
Trust contract:
- Each chapter is analyzed by a separate subagent with allowed_tools
restricted to ['get_page', 'search'] — read-only. Subagents cannot
call put_page or any mutating op. Untrusted EPUB/PDF content cannot
prompt-inject any people/* page because subagents lack write access
entirely.
- Subagents return markdown analysis text via final_message
(SubagentResult.result). The CLI reads each child's job.result and
assembles the final two-column page itself.
- The CLI calls put_page once at the end with operator-level trust
(no viaSubagent flag, no allowedSlugPrefixes). Operator can write
anywhere; the namespace check doesn't fire for direct CLI calls.
Architecture:
- `--chapters-dir` is the input contract. The skill (which has shell +
python access) handles EPUB/PDF extraction; the CLI takes pre-extracted
.txt files. Separation of concerns: skill prepares inputs, CLI is the
trusted runtime.
- Cost-estimate prompt before launching: ~$0.30/chapter × N at Opus,
~$0.06/chapter at Sonnet. Refuses to spend in non-TTY without --yes.
- Idempotency keys on each child: `book-mirror:<slug>:ch-<N>`. Re-running
on same input dedups against the queue; failed chapters retry.
- Partial-failure handling: assembled page renders with completed
chapters and a `## Failed chapters` section listing retries needed.
Exit 1 on any failure; exit 0 only on full success.
- 30-min default per-child timeout (override with --timeout-ms).
CLI wiring:
- `book-mirror` added to CLI_ONLY set in src/cli.ts.
- Lazy-imports src/commands/book-mirror.ts to keep cold-start fast.
Out of scope for this commit (filed for v0.25.1 follow-ons):
- skills/book-mirror/SKILL.md content port (replaces the foundation
scaffold stub).
- test/book-mirror.test.ts (will test arg parsing, validation, mock
fan-out, cost-estimate gating, partial-failure assembly).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.25.1 book-mirror: port SKILL.md content + routing-eval
Replaces the foundation scaffold stub with the full ported book-mirror
SKILL.md, pointing the agent at the new `gbrain book-mirror` CLI as the
trusted runtime.
skills/book-mirror/SKILL.md:
- Drops wintermute_only frontmatter; uses gbrain frontmatter shape
(mutating + writes_pages + writes_to: media/books/).
- Documents the trust contract: subagents are read-only, the CLI does
the put_page write itself with operator trust. Closes the codex
HIGH-1 prompt-injection vector at the tool-allowlist layer.
- Replaces /data/brain/ absolute paths with $BRAIN_DIR resolution from
gbrain config.
- Replaces brain-commit-link.sh / direct shell-script writes with the
CLI's single put_page call.
- Documents EPUB/PDF extraction via the agent's shell + python access
(BeautifulSoup4 for EPUB, pdftotext for PDF). The skill prepares
inputs; the CLI is the trusted runtime.
- Privacy scrub clean — no real names, no /data/brain/, no .openclaw/,
no Wintermute literals.
skills/book-mirror/routing-eval.jsonl:
- 5 paraphrased intents per D-CX-6 rule (intent paraphrases the
trigger, doesn't copy it).
- 3 adversarial intents that pattern-match media-ingest's "process
this book" trigger (IRON RULE regression test for the
media-ingest <-> book-mirror routing conflict flagged in R1+R2).
These assert that book-mirror should NOT win on generic ingest
phrasing.
skills/_brain-filing-rules.json: 4 new directory kinds added so
check-resolvable's filing audit passes for the new skills' writes_to
declarations:
- idea (ideas/) — generative ideas to act on later (voice-note-ingest,
archive-crawler).
- research (research/) — web-research deltas, citation-checked claims
(perplexity-research, academic-verify).
- original (originals/) — user-authored thinking the user originated
(voice-note-ingest, archive-crawler, signal-detector).
- voice-note (voice-notes/) — random-thought audio capture pages
(voice-note-ingest).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.25.1 ports: article-enrichment + strategic-reading + voice-note-ingest
Replaces SKILLIFY_STUB scaffolds with content-ported SKILL.md files in
pure gbrain idiom:
skills/article-enrichment/SKILL.md:
- Drops wintermute-specific scripts/enrich-article.mjs reference; the
skill is markdown agent instructions, not a deterministic script
pipeline.
- Replaces /data/brain/ paths with relative brain-dir paths.
- Documents the structured output contract (Executive Summary,
Quotable Lines verbatim, Key Insights, Why It Matters, See Also,
details-block source preservation).
- Sonnet by default, Opus for high-value content.
skills/strategic-reading/SKILL.md:
- Generic problem-lens reading flow (book/article/case study x specific
strategic problem -> applied playbook with do/avoid/watch-for).
- Drops Garry-specific oppo example ("Tyler Law/Han Zou gatekeeper
fight"); uses generic "gatekeeper-vs-incumbent fight" framing.
- Files to projects/<slug>/playbook.md (problem-tied) or
concepts/<slug>.md (general strategy) per primary-subject filing rule.
- Cross-references book-mirror as the whole-life-personalization
counterpart.
skills/voice-note-ingest/SKILL.md:
- Iron Law: exact phrasing preserved, never paraphrased. Block-quoted
transcript is sacred; analysis is interpretive.
- 7-step decision tree (originals -> concepts -> people -> companies
-> ideas -> personal -> voice-notes catch-all) per
_brain-filing-rules.md.
- Replaces wintermute's brain-commit-link.sh + Supabase Storage helper
with gbrain transcription + storage interface (pluggable per
src/core/storage.ts).
Each skill ships routing-eval.jsonl with 5 paraphrased intents per
D-CX-6 (intent paraphrases trigger, doesn't copy it). The literal
"please <trigger> for me now" stubs from gbrain skillify scaffold are
replaced with realistic user phrasings.
Privacy scrub clean — no real names, no /data/brain/, no .openclaw/,
no Wintermute literals.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.25.1 ports: concept-synthesis + perplexity-research + brain-pdf
Replaces SKILLIFY_STUB scaffolds with content-ported SKILL.md files in
pure gbrain idiom:
skills/concept-synthesis/SKILL.md:
- 4-phase pipeline: dedup -> tier (T1 Canon to T4 Riff) -> synthesize
T1/T2 -> cluster + intellectual map.
- Generic across any concept-stub source (signal-detector,
voice-note-ingest, idea-ingest, archive-crawler).
- Drops wintermute-specific X-pipeline framing (9051 stubs from x-deep-enrich,
scripts/x-concept-compiler.mjs); skill is markdown agent instructions
using gbrain query + put_page.
- Output format: T1 gets full synthesis with evolution table + best
articulation + related-concepts cross-links; T3/T4 stay as stubs.
- Cluster map at concepts/README.md as the master intellectual fingerprint.
skills/perplexity-research/SKILL.md:
- Brain-augmented web research: sends brain context as part of the
Perplexity prompt so the search focuses on what's NEW vs already-known.
- Output structure: Executive Summary + Key New Developments + Confirming
Signals + Contradictions or Updates + Recommended Brain Updates +
Citations.
- Uses Perplexity sonar-pro by default (~$0.04/query); sonar for bulk.
- Drops wintermute-specific scripts/perplexity-research.mjs and
/data/.env path; documents PERPLEXITY_API_KEY in agent env.
- Cross-references academic-verify (which wraps this skill for
citation-checked claim verification per D7/alpha) and enrich (entity
enrichment loop).
skills/brain-pdf/SKILL.md:
- Documents gstack make-pdf as soft prereq with absent-binary detection.
- 4-step workflow: resolve -> strip frontmatter -> render -> deliver.
- Defaults: NO --cover, NO --toc (look corporate and waste space).
- Mandatory CONTAINER=1 for Playwright sandboxing.
- Anti-pattern callout: never use raw MEDIA: tags for Telegram delivery
(they fail silently); use message tool with filePath= attachment.
Each ships routing-eval.jsonl with 5 paraphrased intents per D-CX-6.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.25.1 ports: archive-crawler + academic-verify (final SKILL.md batch)
Replaces the last two SKILLIFY_STUB scaffolds. All 9 new skills now
have ported content; `gbrain check-resolvable` reports zero
skillify_stub_unreplaced warnings.
skills/archive-crawler/SKILL.md (D3 + D12):
- Hard safety gate: refuses to run unless `archive-crawler.scan_paths:`
is set in gbrain.yml. Closes the codex HIGH-4 footgun where 'trust
the prompt' was not a control.
- Schema-generic port (D3 user constraint): no hardcoded era folders
(no archive/, post-stanford/, posterous-era/, initialized-era/,
yc-era/). Reads filing rules from _brain-filing-rules.json at
runtime; agent decides per-page filing within sanctioned dirs.
- Drops wintermute-specific scripts and brain-commit-link.sh; uses
gbrain operations for inventory + put_page for ingest.
- File-type handlers preserved (.mbox, .doc/.docx, .pst, .zip, images)
with the exact same shell + python recipes.
- Manifest tracks per-item triage status + exact user reactions per
conventions/quality.md exact-phrasing rule.
skills/academic-verify/SKILL.md (D4 + D7/alpha):
- Drops ALL the wintermute-specific oppo / adversarial framing: no
Goff/Solomon, no CPE, no '48 Hills', no fabrication-detection,
no 'oppo research where the target relies on academic credentials'.
This is the public skillpack — research-not-adversarial bar.
- Pure-routing implementation per D7/alpha: skill is a thin
orchestrator that scopes the claim, invokes
perplexity-research with citation-mode prompt, and formats results
as a verdict-shaped brain page. Zero new infrastructure.
- 5 verdict states (verified / partial / unverifiable / misattributed
/ retracted) replace the 'fabrication suspected' / 'methodologically
flawed' classifications that read like takedown rubric.
- Documents Retraction Watch / PubPeer / OSF / Semantic Scholar /
OpenAlex / Many Labs as the databases the agent uses via
perplexity-research, but doesn't ship its own API integrations.
Each ports a routing-eval.jsonl with 5 paraphrased intents per D-CX-6.
Privacy scrub clean. typecheck OK. Remaining check-resolvable warnings
are routing_miss on the substring matcher (paraphrased intents don't
exact-match the RESOLVER triggers); the LLM tie-break layer is a
v0.26+ enhancement per CLAUDE.md routing-eval section. Warnings are
advisory, not errors.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.25.1 drift backports: citation-fixer + testing + cross-modal-review
Pulls the wintermute drift improvements identified by R1's quick audit
into the public skillpack, in pure gbrain idiom (no real names, no
/data/brain/ paths, no Wintermute literals — privacy guard passes).
skills/citation-fixer/SKILL.md (PORT, version 1.0 -> 1.1):
- Adds tweet/post URL resolution: scans pages for broken tweet
references (no x.com URL) and resolves them via the host's X API
integration.
- 5-step pipeline: identify broken refs -> extract searchable content
(handle/quote/date) -> X API search -> verify + extract metadata
-> patch the page with deterministic URL.
- Batch-mode pattern with priority order (recently changed pages
first), rate-limit guidance (~50 pages/run), batch-commit cadence.
- Integration callout: enrich + media-ingest can call
citation-fixer pre-commit to validate output.
- Anti-pattern: never compose tweet URLs by guessing the id;
deterministic links only (per _output-rules.md).
skills/testing/SKILL.md (PORT, version 1.0 -> 1.1):
- Splits into TWO modes: skill conformance validation (original 1.0
scope) AND project test-suite health (v0.25.1 extension).
- Test tiers: unit (<2s, every commit), evals (~60s, daily),
integration (~5m, pre-ship + nightly), system health (<10s).
- Daily run protocol: unit -> evals -> system -> git diff analysis
for regression intelligence.
- Failure classification: REGRESSION / STALE / FLAKE / NEW / INFRA
with markers (red / yellow / warning / green / wrench).
- Auto-fix protocol: explicit DO and DO NOT lists. Security-test
failures always escalate, never auto-fix.
- State tracking at ~/.gbrain/test-state.json for trend analysis,
flake detection, regression velocity.
skills/cross-modal-review/SKILL.md (PORT, version 1.0 -> 1.1):
- Adds explicit "When to invoke" gating (significant code changes 5+
files / 100+ lines, security-sensitive, architecture, churning,
pre-bulk, skill creation, brain-page quality) vs DO NOT invoke
(simple memory writes, typo fixes, routine cron, post-review
commits).
- Adds code-review handoff section: knows WHEN to recommend gstack's
/codex review (independent diff review from a different AI) and how
to frame the cross-model output.
- Adversarial Challenge sub-mode: red-team prompt for security-
sensitive changes; output adds exploitability rating
(CRITICAL/HIGH/MEDIUM/LOW) + mitigations.
- Iron Law: user-sovereignty rule explicitly captured. Reviewer
findings are informational until the user explicitly approves;
cross-model consensus is signal, not permission.
All three pass scripts/check-privacy.sh (no Wintermute literals, no
/data/brain/, no /data/.openclaw/). typecheck OK.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.25.1 skillpack uninstall: D6 + D8 + D11 content-hash guard
Implements `gbrain skillpack uninstall <name>` per the locked
v0.25.1 plan. Inverse of install with symmetric data-loss posture:
refuses if the slug isn't in the managed-block's cumulative-slugs
receipt (D8) or if any installed file diverges from the bundle
original (D11). Same --overwrite-local escape hatch as install.
src/core/skillpack/installer.ts:
- New UninstallError class (mirrors InstallError shape) with codes:
lock_held, bundle_error, target_missing, unknown_skill,
user_added_slug (D8), locally_modified (D11), managed_block_missing.
- New types: UninstallFileOutcome, UninstallFileResult,
UninstallResult, UninstallOptions.
- New applyUninstall() function. Steps:
1. Acquire workspace lockfile (same gate as install).
2. D8 check: read managed block; verify slug is in cumulative-slugs
receipt. If user-added or unknown, throw user_added_slug.
3. Enumerate bundle entries scoped to the skill (NOT shared_deps —
other installed skills depend on them).
4. D11 check: hash each existing target file vs bundle original.
Skip removal for divergent files unless --overwrite-local.
5. Atomic: if ANY file would be skipped due to local-mod and the
user did not pass --overwrite-local, refuse the WHOLE uninstall
(no half-uninstall — would desync managed block from filesystem).
6. Rebuild managed block via applyManagedBlockUninstall() (drops
slug from cumulative-slugs, preserves other rows + user-added
unknown rows with stderr warning, atomic write via writeAtomic).
7. Release lock.
src/commands/skillpack.ts:
- Wire `gbrain skillpack uninstall` subcommand. Flags mirror install:
--dry-run, --overwrite-local, --force-unlock, --skills-dir,
--workspace, --json, --help.
- Exit codes: 0 success, 1 refused due to local-mod (recoverable
with --overwrite-local), 2 setup error (slug not in receipt, no
workspace, lock held, etc.).
- Help text documents the symmetric trust contract explicitly.
D6 test slot is filled (smoke test t2 "uninstall changes routing"
will use this command). Per the plan, no `--all` uninstall in v0.25.1
(scope-narrowing; renaming a skill in the bundle should still be the
install --all path that prunes).
Typecheck passes. Privacy guard passes. `gbrain skillpack uninstall
--help` renders correctly.
Out of scope for this commit (next):
- test/skillpack-uninstall.test.ts (D8 + D11 cases, multi-arg,
fail-loud-under-lock, idempotent-when-absent).
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.25.1 archive-crawler safety gate (D12 + codex HIGH-4 fix)
Adds the gbrain.yml `archive-crawler.scan_paths:` allow-list contract
that closes the codex HIGH-4 finding. The archive-crawler skill
refuses to run unless the user has explicitly listed paths the agent
is permitted to scan.
src/core/archive-crawler-config.ts (NEW, 263 lines):
- Sibling to storage-config.ts (separate concern: archive scanning,
not storage tiering; same gbrain.yml file shape).
- Hand-rolled parser for the `archive-crawler:` section (mirrors
storage-config's parsing pattern; same trade-off — narrow-but-
predictable, zero-dep).
- Accepts both `archive-crawler:` and `archive_crawler:` spellings.
- ArchiveCrawlerConfig: { scan_paths: string[]; deny_paths: string[] }
— both normalized to absolute trailing-slashed paths.
- Validation:
* scan_paths MUST be non-empty (D12 contract)
* Every path absolute after ~ expansion (rejects relative)
* Path-traversal rejected (`..` literal in path → invalid_path)
* Trailing-slash normalized for unambiguous prefix matching
- isPathAllowed(candidate, config) helper for runtime per-file gate:
prefix-match against scan_paths, deny_paths overrides. Directory-
boundary safe — /writing/ does NOT match /writing-stuff/.
- ArchiveCrawlerConfigError class with discriminated codes:
missing_section / empty_scan_paths / invalid_path / parse_error.
test/archive-crawler-config.test.ts (NEW, 19 tests):
- D12 missing_section gates: null repoPath, missing gbrain.yml, no
archive-crawler section.
- D12 empty_scan_paths: scan_paths omitted or empty array.
- D12 invalid_path: relative path, ".." traversal in scan_paths,
".." traversal in deny_paths.
- Happy path: normalized paths, ~ expansion, deny_paths optional,
both archive-crawler and archive_crawler key spellings.
- Direct API validation (normalizeAndValidateArchiveCrawlerConfig).
- isPathAllowed: scan_path match, scan_path miss, deny_path override,
directory-boundary correctness (writing/ vs writing-stuff/),
relative-path rejection.
19/19 pass in 17ms. Privacy guard passes. Typecheck OK.
The skills/archive-crawler/SKILL.md (already shipped in earlier
commit) documents the contract; this commit lands the runtime
that enforces it. The skill's safety claim is no longer aspirational.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* v0.25.1 PTY harness port from gstack (D14/C-prime)
Ports gstack's claude-pty-runner.ts (~1300 lines) as a generalized
gbrain harness (~470 lines after trimming gstack-specific
orchestrators). Used by the smoke test E2E to drive interactive
openclaw sessions; future: any CLI command that grows interactive
prompts becomes testable without a refactor.
test/helpers/cli-pty-runner.ts (NEW, 470 lines):
- launchPty(opts): generic CLI spawner via Bun.spawn `terminal:` mode.
Drops gstack's launchClaudePty's --permission-mode plan default;
takes any binary + args.
- resolveBinary(name, override?): finds CLI binaries on PATH with
homebrew/local/bun fallbacks.
- stripAnsi: standard CSI + OSC + charset + DEC-special escape
stripping (verbatim port).
- isNumberedOptionListVisible: cursor + numbered list detection.
- parseNumberedOptions: extracts cursor-anchored numbered AUQ options
(1-based indices, sequential block only). Handles cursor-on-non-1
(user pressed Down) and box-layout AUQs (cursor mid-line after
dividers). Reads only last 4KB to avoid matching stale lists.
- optionsSignature: stable hash for "is this AUQ the same as last
poll?" detection.
- isTrustDialogVisible: matches Claude Code's "trust this folder"
dialog so launchPty can auto-handle it.
- PtyOptions / PtySession types + send / sendKey / mark / visibleSince
/ waitFor / waitForAny primitives.
- launchPty internals: terminal: mode, exit tracking, wall-clock
timeout, autoTrust polling watcher (15s window), graceful close
with SIGINT then SIGKILL fallback.
DROPPED from the gstack original (gstack-specific):
- runPlanSkillObservation, runPlanSkillCounting, invokeAndObserve
(Claude-Code plan-mode test orchestrators).
- isPlanReadyVisible, isPermissionDialogVisible (Claude-Code-specific
dialog detection).
- ceoStep0Boundary, engStep0Boundary, designStep0Boundary,
devexStep0Boundary (per-skill /plan-* boundary predicates).
- MODE_RE, COMPLETION_SUMMARY_RE, parseQuestionPrompt, auqFingerprint,
assertReviewReportAtBottom (gstack plan-review specifics).
- classifyVisible (plan-mode outcome classifier).
If the smoke test ever needs Claude-Code-specific dialog detection,
add a thin wrapper in test/e2e/ — keeping the harness generic.
test/cli-pty-runner.test.ts (NEW, 24 tests, all pass):
- stripAnsi: 6 cases (CSI, OSC-BEL, OSC-ST, charset, DEC-special, plain)
- isNumberedOptionListVisible: 4 cases (match, no-cursor, single-opt,
TTY collapsed-whitespace)
- parseNumberedOptions: 7 cases (3-opt, no-list, single-opt, prose-
gating-pattern, gap-truncation, cursor-on-non-1, last-4KB-only)
- optionsSignature: 2 cases (order-independence, label-changes-sig)
- isTrustDialogVisible: 2 cases (canonical phrase, non-match)
- resolveBinary: 3 cases (override, missing, sh-on-path)
24/24 pass in 14ms. Privacy guard passes. Typecheck OK.
Bun version requirement (D14): engines.bun >= 1.3.10 (set in commit
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736e8de1ec |
v0.25.0 feat: BrainBench-Real session capture + public-exports contract test (#437)
* feat(v0.22.0): eval_candidates + eval_capture_failures schema (Lane 1A)
R1 substrate for BrainBench-Real, replayed onto master after Cathedral II
landed. Migration v30 (slotted after master's v25-v29 Cathedral II wave)
creates two tables:
eval_candidates: per-call capture of MCP/CLI/subagent query+search
traffic. Column set lets gbrain-evals replay with full fidelity —
source_ids from v0.18 multi-source, vector_enabled/detail_resolved/
expansion_applied so replay knows what hybridSearch actually did,
remote + job_id + subagent_id so rows are traceable to their origin.
query is CHECK-capped at 50KB; PII scrubber (Lane 1B) runs before insert.
eval_capture_failures: cross-process audit trail. In-process counters
don't work because `gbrain doctor` runs in a separate process from
the MCP server. Persistent rows let doctor query capture health via
COUNT(*) GROUP BY reason over the last 24h.
Both tables get RLS on Postgres gated on BYPASSRLS (matches v24/v29
posture). PGLite ignores RLS; sqlFor split carries only DDL.
5 new BrainEngine methods (breaking-interface addition, drives v0.22.0
minor bump): logEvalCandidate, listEvalCandidates,
deleteEvalCandidatesBefore, logEvalCaptureFailure, listEvalCaptureFailures.
listEvalCandidates uses ORDER BY created_at DESC, id DESC so
`gbrain eval export` is deterministic across same-millisecond inserts.
Also adds HybridSearchMeta type for the side-channel callback used by
Lane 1C's op-layer capture (no change to hybridSearch return shape —
that respects Cathedral II's existing SearchResult[] contract).
Tests: 14 PGLite round-trip cases + 8 v30 structural assertions.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(v0.22.0): PII scrubber + op-layer capture module (Lane 1B)
Replayed onto master post-Cathedral II. Same semantics as the original
v0.21.0 work — only adjusted to import HybridSearchMeta from types.ts
(canonical home) instead of redeclaring it locally.
src/core/eval-capture-scrub.ts — pure-function regex scrubber with 6
pattern families: emails, phones (US + E.164), SSN (year-aware),
Luhn-verified credit cards, JWT-shaped tokens, bearer tokens. Zero
deps. Adversarial-input safe.
src/core/eval-capture.ts — op-layer hook helper:
- buildEvalCandidateInput(ctx, {scrub_pii}) — pure row builder
- classifyCaptureFailure(err) — Postgres SQLSTATE → reason tag
- captureEvalCandidate(engine, ctx, opts) — best-effort, never throws
- isEvalCaptureEnabled / isEvalScrubEnabled — file-plane config checks
GBrainConfig gains `eval?: {capture?, scrub_pii?}`. Both default ON.
File-plane only — `gbrain config set` writes the DB plane, doesn't
control capture.
Tests: 17 scrubber + 21 capture-module cases. Zero regressions.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(v0.22.0): hybridSearch onMeta callback + op-layer capture (Lane 1C)
Replayed onto master. Adapted from the original v0.21.0 work to keep
Cathedral II's contract intact: hybridSearch's return stays
`Promise<SearchResult[]>` (unchanged), and meta surfaces via an optional
`onMeta?: (meta: HybridSearchMeta) => void` callback in HybridSearchOpts.
Cathedral II callers leave onMeta undefined and pay no cost. The
op-layer capture wrapper passes a closure that threads meta into the
captured row so gbrain-evals can distinguish:
- "with OPENAI_API_KEY" vs "keyword-only fallback" (vector_enabled)
- "expansion fired" vs "expansion requested + silently fell back" (expansion_applied)
- what hybridSearch actually used after auto-detect (detail_resolved)
Op-layer capture wired into both `query` and `search` op handlers in
src/core/operations.ts. Single hook site catches MCP dispatch + CLI +
subagent tool-bridge from the same place. Fire-and-forget, never throws,
respects ctx.config.eval.capture off-switch.
Tests:
- test/hybrid-meta.test.ts (8 cases) — onMeta accuracy across the 4
return paths in hybridSearch + verification that omitting onMeta
leaves Cathedral II callers unchanged.
- test/mcp-eval-capture.test.ts (10 cases) — query/search ops capture
correctly with MCP/CLI/subagent contexts, scrub on/off, capture=false
off-switch, non-captured ops (list_pages, get_page), F1 failure
isolation.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(v0.22.0): gbrain eval export/prune + doctor eval_capture check (Lane 1D)
Replayed onto master. Same semantics as the original v0.21.0 work.
CLI:
gbrain eval export [--since DUR] [--limit N] [--tool query|search]
NDJSON to stdout, every row prefixed with "schema_version":1 per
docs/eval-capture.md contract. EPIPE-safe streaming, stderr
heartbeats, deterministic ordering (created_at DESC, id DESC).
gbrain eval prune --older-than DUR [--dry-run]
Explicit retention cleanup. Requires --older-than (never deletes
without a window). Duration strings: 30d, 7d, 1h, 90m, 3600s.
Legacy bare `gbrain eval --qrels …` still works via sub-subcommand
fall-through.
gbrain doctor gains an eval_capture check between markdown_body_completeness
and queue_health: reads eval_capture_failures for the last 24h, groups by
reason, warns when non-zero. Pre-v30 brains get "Skipped (table
unavailable)" — non-fatal.
docs/eval-capture.md ships the stable NDJSON schema reference for
gbrain-evals consumers.
Tests: 9 export cases + 5 prune cases. Doctor check covered by
existing doctor tests on master.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(v0.22.0): public-exports contract test + CI count guard (Lane 2 / R2)
Master locks 17 public subpath exports as gbrain's stable third-party
contract. Zero enforcement existed. This PR locks the surface in two
layers:
1. test/public-exports.test.ts — runtime contract test.
Reads package.json "exports" at startup. For each subpath, imports
via the package name ("gbrain/engine"), NOT the relative filesystem
path — that's the difference between exercising the actual resolver
and bypassing it. Every subpath gets a canary symbol pinned (e.g.
gbrain/search/hybrid must export hybridSearch + rrfFusion) so a
refactor that renames or removes one fails CI before downstream
consumers (gbrain-evals) silently break.
2. scripts/check-exports-count.sh — CI structural guard.
Wired into `bun test` after check-jsonb-pattern.sh +
check-progress-to-stdout.sh + check-wasm-embedded.sh per master's
precedent. EXPECTED_COUNT=17 baseline — shrinks fail loudly,
growth also fails so the new canary must be pinned in the runtime
test deliberately.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs+e2e(v0.22.0): VERSION/CHANGELOG/CLAUDE/README + Postgres E2E (Lane 3)
Bump VERSION + package.json to 0.22.0 (next free slot after master's
v0.21.0 Code Cathedral II minor).
CHANGELOG.md v0.22.0 entry follows the Garry voice template:
- Bold 2-line headline
- Lead paragraph contextualizing v0.20 + v0.21 + v0.22 progression
- Numbers-that-matter table comparing v0.21.0 → v0.22.0
- "What this means for you" sectioned by audience
- "## To take advantage of v0.22.0" operator runbook
- Itemized changes
CLAUDE.md updates:
- Key files: 8 new module entries (eval-capture*, eval-export,
eval-prune, docs/eval-capture.md, public-exports test).
hybrid.ts entry rewritten to reflect the additive `onMeta` callback
(return shape unchanged).
- Key commands: new v0.22.0 section for `gbrain eval export`,
`gbrain eval prune`, and the doctor `eval_capture` check, with the
file-plane vs DB-plane config gotcha called out.
README.md: one-paragraph pointer after the BrainBench blurb so anyone
reading the landing page sees the new session-capture feature.
llms.txt + llms-full.txt regenerated to pick up the doc additions.
test/e2e/eval-capture.test.ts (Postgres-only E1 spec):
- CHECK violation surfaces as Postgres SQLSTATE 23514 on oversize input
- RLS is actually enabled on both eval_candidates + eval_capture_failures
- 50 concurrent logEvalCandidate calls — no deadlock, all distinct IDs
Skips gracefully when DATABASE_URL is unset.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs(todos): P0 — PGLite test-runner concurrency flake
Pre-existing on master, surfaces ~27 false failures when bun test runs all
174 files together. Each failing file passes in isolation. Tracked for a
dedicated investigation branch.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* fix(v0.22.0): adversarial review post-fixes (doctor RLS, onMeta safety)
Two surgical fixes from /ship adversarial review, plus 6 follow-ups TODO'd
into v0.22.1:
- doctor.ts: distinguish pre-v30 missing-table (42P01, ok skip) from
RLS-denied SELECT (42501, warn) and other DB errors (warn). The check
exists specifically to surface capture-failure misconfigs cross-process,
so silently reporting "ok / skipped" on the most diagnostic class
defeated the purpose.
- hybrid.ts: wrap onMeta invocation in try/catch via small emitMeta
helper. The callback is part of the public gbrain/search/hybrid
contract; a throwing user-supplied closure must never break the search
hot path.
- TODOS.md: 6 P1 follow-ups (eval prune real COUNT, scrubber CC false
positives, dead 'scrubber_exception' enum value, id-cursor for
cross-window dedup, public-export canary pinning, EXPECTED_COUNT dedup).
- TODOS.md: P0 entry for the pre-existing PGLite test-runner concurrency
flake (~27 false failures in full bun test on master).
- CHANGELOG.md: 2 bullets noting the doctor + onMeta hardening.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore(version): bump v0.22.0 → v0.25.0 (queue-aware version pick)
Master is at v0.21.0. Open PRs claim v0.21.1 (#432) and v0.24.0 (#387).
v0.25 is the first uncontested slot, so this branch claims it. Pure
rename across VERSION, package.json, CHANGELOG header, and every "v0.22.0"
reference in CLAUDE.md / README.md / TODOS.md / docs/eval-capture.md /
src/ / test/ files. CHANGELOG date bumped to 2026-04-26.
llms.txt + llms-full.txt regenerated.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(v0.25.0): gbrain eval replay + contributor doc + CONTRIBUTING link
Closes the gap between "session capture works" (this PR's core) and
"contributors actually use it before merging." Three artifacts:
- src/commands/eval-replay.ts (~340 LOC) — reads NDJSON from `gbrain eval
export`, re-runs each captured query/search against the current brain,
computes set-Jaccard@k, top-1 stability, and latency delta. Stable JSON
shape (schema_version:1) for CI gating; human mode prints a regression
table sorted worst-first. Pure Bun, zero new deps. Stub-engine tests
cover Jaccard math, NDJSON parser (including v2 forward-compat
rejection + line-numbered errors), --limit, --verbose, --json, and
graceful per-row error handling. 16/16 passing.
- docs/eval-bench.md (~80 lines) — contributor guide. The 4-command loop
(export → change → replay → diff), metric definitions with healthy
ranges (Jaccard ≥0.85, top-1 ≥85%, latency Δ within ±50ms), trigger
paths, CI integration snippet, hand-crafted NDJSON corpus path for
fresh installs, and the off-switch. Pairs with the existing
docs/eval-capture.md which is the consumer-facing wire format.
- CONTRIBUTING.md gains a "Running real-world eval benchmarks (touching
retrieval code)" section with the trigger paths and a link to
docs/eval-bench.md. Reviewers now have a one-line ask: "did you run
replay?"
CLAUDE.md key files updated. CHANGELOG bullets added. llms.txt
regenerated.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* feat(v0.25.0): CONTRIBUTOR_MODE flag — capture off by default for users
Eval capture was on for everyone in the v0.25.0 draft. Privacy footgun:
end users had retrieval traffic accumulate in their brain DB without
asking, even with PII scrubbing. Flips to off by default + explicit
opt-in for contributors who actually use the replay loop.
Resolution order in isEvalCaptureEnabled():
1. config.eval.capture === true → on
2. config.eval.capture === false → off
3. process.env.GBRAIN_CONTRIBUTOR_MODE === '1' → on
4. otherwise → off
The env var is the contributor-facing toggle (one line in .zshrc, no
JSON edit). Explicit config wins both directions for users who want to
override per-brain.
PII scrubbing gate stays independent — default true regardless of
CONTRIBUTOR_MODE — so any brain that does capture still scrubs.
Tests rewritten: env var hygiene per-test (origMode preserved + restored
in finally). 9/9 pass; total v0.25.0 suite is 198/198.
Docs:
- README.md gains a Contributing-section pointer to the env var.
- CONTRIBUTING.md gains a "CONTRIBUTOR_MODE — turn on the dev loop"
section with verification commands and resolution-order table.
- docs/eval-bench.md leads with the prerequisite (must set the env var
for the rest of the doc to be useful).
- docs/eval-capture.md "Config" section split into Path A (env var) +
Path B (config) with explicit resolution-order rules.
- CHANGELOG v0.25.0 entry corrected ("on by default" was wrong) plus a
new top itemized bullet calling out the gate change.
- CLAUDE.md eval-capture entry annotated with the new gate logic.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* docs: post-ship documentation pass for v0.25.0
Cross-references every doc against the final state of the branch
(CONTRIBUTOR_MODE flag, eval replay tool, off-by-default capture):
- README.md: top callout rewritten — was implying capture-on-by-default
contradicting the gate landed in
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4fc1246606 |
v0.24.0: production-hardening pass on the skillify loop (#387)
* feat: v0.19.0 — skillify loop + AGENTS.md compat + brain-first convention This is the v0.19.0 release. The branch ships four new CLI commands, a refactor to check-resolvable, and an expansion of the brain-first convention for sub-agent tool discovery. The original commit message described only the convention expansion, undercounting the scope by ~5x; this amend captures the full release. NEW COMMANDS - gbrain skillify scaffold <name> — 4 stub files + idempotent resolver row - gbrain skillify check [path] — 10-item post-task audit (promoted) - gbrain skillpack list / install — curated 25-skill bundle, atomic install - gbrain skillpack diff <name> — per-file diff preview - gbrain routing-eval — dedicated CI verb for Check 5 fixtures CHECK-RESOLVABLE REFACTOR - Accepts AGENTS.md as a resolver file alongside RESOLVER.md, at either the skills directory or one level up (workspace root layout). - Auto-derives the skill manifest by walking skills/*/SKILL.md when manifest.json is missing. - Splits ResolvableReport into errors[] + warnings[] so advisory checks (filing audit, routing gaps, DRY violations) don't break CI by default. - New --strict opt-in flag promotes warnings to exit 1. BRAIN-FIRST CONVENTION - skills/conventions/brain-first.md expanded from 5-step lookup guide to full sub-agent reference: tool inventory, lookup chain, score thresholds, authority hierarchy, sync rules, entity page conventions, sub-agent propagation rule. PRODUCTION-READINESS HARDENING (this branch's review pass) - routing-eval --llm: emits stderr placeholder notice + runs structural layer only. README, CHANGELOG, CLI help all rewritten consistently. Was a silent no-op against documented contract. - skillpack installer: receipt comment in fence (cumulative-slugs="...") preserves single-skill-install accumulation while letting install --all prune removed bundle skills cleanly. Unknown rows preserved + stderr warning for the operating agent. Pre-v0.19 fences upgrade silently. - skillify scaffold: resolver-row regex broadened to detect backticked, quoted, and bare path forms. No duplicate row on --force after the user normalizes formatting. - scripts/check-privacy.sh: now wired into package.json test chain so the wintermute-ban rule is actually enforced. New regression test. - E2E Tier 2 (LLM skills) promoted from schedule-only to required per-PR CI. Local Tier 1 + Tier 2 verified clean. - Stale v0.17/v0.18 version labels rewritten across new files. TESTS - test/routing-eval-cli.test.ts: 4 cases covering --llm warn semantics - test/privacy-script-wired.test.ts: regression guard for CI wiring - test/skillpack-install.test.ts: 4 new cases for receipt + cumulative + unknown-row preserve+warn + pre-v0.19 upgrade path - test/skillify-scaffold.test.ts: 4 new cases for broadened regex VERIFICATION - bun test: 2237 pass / 18 known PGLite-contention flakes (CI green; documented as P3 dev-experience in TODOS.md) - bun run typecheck: clean - bun run test:e2e: 18/19 files green (1 pre-existing flake on master, not caused by this branch — verified via git stash) - llms.txt + llms-full.txt regenerated to match README + CHANGELOG Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: scrub banned fork name from public artifacts The privacy guard wired into the test chain in this branch caught 5 pre-existing references to the banned OpenClaw fork name in CHANGELOG.md (2x), skills/migrations/v0.19.0.md (1x), src/cli.ts (1x), and src/commands/sync.ts (1x). All originated in master's v0.19.0 release notes and migration doc when the privacy script existed but wasn't wired into CI yet. Replacements per CLAUDE.md privacy mapping: - Origin-story copy (CHANGELOG layer narratives, code comments naming the production deployment that drove the feature) → "Garry's OpenClaw" - Reader-facing migration step → "your OpenClaw" No code semantics changed. Comments + headings only. Verification: scripts/check-privacy.sh exits 0, full CI guard chain green (privacy + jsonb + progress + wasm + typecheck). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: bump VERSION to 0.24.0 + new CHANGELOG entry Bump branch version above master's v0.21.0 per CLAUDE.md "CHANGELOG + VERSION are branch-scoped" rule. The new v0.24.0 entry at the top of CHANGELOG covers what THIS branch adds vs master: - routing-eval --llm honesty pass (4-surface contract drift fix) - skillpack installer cumulative-receipt + unknown-row preserve+warn (the Codex-caught regression that would have shipped in master if the original v0.19.0 had landed without this branch's review pass) - skillify scaffold resolver-row regex broadening (backtick + quoted + bare forms; idempotency contract preserved under hand-editing) - 5 banned-name leaks scrubbed from public artifacts - check-privacy.sh wired into CI test chain + regression guard test - 7 stale v0.17/v0.18 version labels rewritten across 5 files - Tier 2 (LLM-skills E2E) promoted from schedule-only to required per-PR VERSION 0.21.0 → 0.24.0 package.json version field synced. llms.txt + llms-full.txt regenerated (no content drift; sizes match). Test suite: 62/62 green across the 5 test files this branch added or extended (routing-eval-cli, privacy-script-wired, skillpack-install, skillify-scaffold, build-llms). CI guards: privacy + jsonb + progress + wasm + typecheck all clean. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: update project documentation for v0.24.0 Auto-discovered drift via /document-release after the v0.24.0 hardening pass landed. All factual corrections clearly warranted by the diff. CLAUDE.md: - Skillpack installer: documented the cumulative-slugs receipt comment, install --all prune semantics, unknown-row preserve+warn behavior, and pre-v0.24 silent upgrade. Was previously vague about "tracks a skill manifest so install --update diffs cleanly" without explaining what the receipt is or why it matters. - routing-eval: replaced the false claim that --llm "opts into a Haiku tie-break layer for CI." Now correctly describes the placeholder semantic landed in v0.24.0 (stderr notice + structural-only run). README.md: - Skillpack section: added one paragraph on the receipt comment + the user-visible stderr message for hand-added rows. Connects the safe rerun promise to the v0.24.0 implementation that actually enforces it. CONTRIBUTING.md: - Running tests section: now recommends `bun run test` (full CI guard chain + typecheck + tests) before pushing. Names each guard so new contributors understand what catches what. The privacy guard (newly wired in v0.24.0) is one of these — without `bun run test` you'd skip it locally and find out from CI. llms-full.txt: regenerated to reflect CLAUDE.md changes. Verification: full guard chain green locally (privacy + jsonb + progress + wasm + typecheck). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Garry Tan <garry@ycombinator.com> Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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90e22c22e2 |
v0.23.1 feat: local CI gate + 4-tier wall-time optimization (~13x faster) (#528)
* feat: diff-aware E2E test selector Adds scripts/select-e2e.ts: reads git diff vs origin/master, classifies the change set (EMPTY/DOC_ONLY/SRC), and emits the relevant E2E test files on stdout. Fail-closed by design: any unmapped src/ change runs all E2E. - scripts/e2e-test-map.ts: hand-tuned path-glob -> test files map - scripts/select-e2e.ts: pure-function selector with three explicit cases - scripts/run-e2e.sh: accepts optional file list from argv + --dry-run-list - test/select-e2e.test.ts: 24 cases including 3 codex regression guards (skills/, untracked files, unmapped src/) * feat: local CI gate via docker compose Adds bun run ci:local — runs every check GH Actions runs (gitleaks + unit + 29 E2E files) inside a Docker container that bind-mounts the repo. Pure bind-mount + named volumes (gbrain-ci-node-modules, gbrain-ci-bun-cache, gbrain-ci-pg-data) for fast warm restarts. - docker-compose.ci.yml: pgvector/pgvector:pg16 + oven/bun:1 - scripts/ci-local.sh: orchestrator with --diff, --no-pull, --clean - gitleaks runs on host (scoped to working dir + branch commits) - DATABASE_URL unset for unit phase (matches GH Actions split) - git installed in container at startup (oven/bun:1 omits it) - Postgres host port via GBRAIN_CI_PG_PORT env (default 5434) Stronger than PR CI: runs all 29 E2E files vs CI's 2-file Tier 1. * chore: bump version and changelog (v0.23.1) Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: document local CI gate for v0.23.1 CLAUDE.md gains key-files entries for docker-compose.ci.yml, scripts/ci-local.sh, scripts/select-e2e.ts + e2e-test-map.ts, and the scripts/run-e2e.sh argv tweak. Pre-ship requirements section now lists the Docker-based local gate as Path A alongside the manual lifecycle. CONTRIBUTING.md tests section adds the bun run ci:local / ci:local:diff / ci:select-e2e block with prerequisites (Docker engine + gitleaks) and the GBRAIN_CI_PG_PORT override. AGENTS.md "Before shipping" promotes ci:local as the easiest path and keeps the manual lifecycle as a fallback. README.md Contributing section points to ci:local for the full gate. CHANGELOG.md untouched — v0.23.1 entry already finalized. Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> * feat: SHARD=N/M env support in scripts/run-e2e.sh Filters the E2E file list to every M-th file starting at index N (1-indexed). Sequential execution within a shard preserves the TRUNCATE CASCADE no-race property documented at the top of the file. Empty-shard handling under `set -u` uses ${arr[@]:-} fallback. Standalone change; not yet wired up in ci-local.sh. * feat: 4-way parallel E2E shards in ci:local Replaces the single postgres service with 4 (postgres-1..4) on host ports 5434-5437. scripts/ci-local.sh fans 4 workers via xargs -P4 inside the runner container; each pinned to its own DATABASE_URL via SHARD=N/4. Wall-time on a 16-core host: ~6 min sequential -> ~1.5-2 min sharded. Total full-gate wall-time goes from ~25 min to ~3-5 min warm. Also handles git-worktree (Conductor) layouts: when /app/.git is a file instead of a directory, parse the gitdir + commondir and bind-mount the shared host gitdir at its absolute path. Without this, in-container `git ls-files` (used by scripts/check-trailing-newline.sh and friends) exits 128 with "not a git repository". Also runs `git config --global --add safe.directory '*'` inside the container so the root-uid container can read host-uid gitdir without "dubious ownership" rejection. CHANGELOG entry updated to cover the speedup. - docker-compose.ci.yml: 4 pgvector services + per-shard named volumes - scripts/ci-local.sh: parallel xargs orchestration + worktree mount fix - CHANGELOG.md v0.23.1: 4-way sharded wall-time, 36 E2E files, --no-shard flag * chore: regenerate llms-full.txt for v0.23.1 doc updates Required by test/build-llms.test.ts case 4 — committed llms-full.txt must match `bun run build:llms` output. The CHANGELOG + CLAUDE.md updates in this branch shifted bytes; regen catches up. * feat: scripts/run-unit-shard.sh + slow-test convention Tier 1 + Tier 4 plumbing: - scripts/run-unit-shard.sh: SHARD=N/M filter for unit files (excludes test/e2e/*). Excludes *.slow.test.ts (Tier 4 convention) so the fast shard fan-out skips known-slow files; CI's `bun run test` still includes them via default discovery. - scripts/run-slow-tests.sh: companion that runs ONLY *.slow.test.ts. Wired as `bun run test:slow`. - scripts/profile-tests.sh: portable awk parser that extracts the top-N slowest tests from any captured `bun test` output. Wired as `bun run test:profile`. Use it to pick demotion candidates. * feat: PGLite snapshot fixture for ~4.5x faster cold init (Tier 3) scripts/build-pglite-snapshot.ts boots a fresh PGLite, runs the full initSchema() (forward bootstrap + 30 migrations), and dumps the post-init state to test/fixtures/pglite-snapshot.tar plus a SHA-256 schema hash sidecar (.version). Both gitignored — built on demand via `bun run build:pglite-snapshot`. PGLiteEngine.connect() reads GBRAIN_PGLITE_SNAPSHOT env: validates the sidecar hash against the in-process MIGRATIONS hash, loads via PGLite's loadDataDir blob, sets _snapshotLoaded so initSchema() short-circuits. Measured per-file cold init drops from 828ms → 181ms. Bootstrap-correctness tests (bootstrap.test.ts, schema-bootstrap-coverage.test.ts) explicitly delete the env at file top so they keep exercising the cold path they verify. * feat: --classify-only + heartbeat tolerance fix (Tiers 2 + flake fix) - scripts/select-e2e.ts: --classify-only flag emits EMPTY|DOC_ONLY|SRC. Used by ci-local.sh's --diff fast-path to skip the heavy gate when only docs changed. - test/progress.test.ts: startHeartbeat tolerance widened to 1-20 over 200ms (was 2-6 over 85ms). Under 4-way parallel shard load on a contended host, setTimeout's effective quantum balloons and the tight bound flakes. The test still verifies "fires multiple times, stops cleanly" — exact count was never load-bearing. * feat: 4-way unit + E2E sharding in ci-local.sh + CHANGELOG (Tiers 1-4) ci-local.sh ties the four tiers together: - Tier 2: pre-flight diff classification on host. DOC_ONLY exits in ~5s (gitleaks only, no postgres, no container). - Tier 1: guards + typecheck run ONCE before fan-out. xargs -P4 then spawns 4 shards inside the runner container, each running unit phase (env -u DATABASE_URL bash run-unit-shard.sh) followed by E2E phase (DATABASE_URL=postgres-N bash run-e2e.sh) — both sharded N/4. Per-shard logs in /tmp/shard-logs/shard-N.log; printed in shard order at the end. - Tier 3: snapshot fixture built once at runner startup if missing, GBRAIN_PGLITE_SNAPSHOT exported so all shards inherit. - Tier 4: run-unit-shard.sh excludes *.slow.test.ts; run-slow-tests.sh + test:slow npm script handle the demoted set. - --no-shard preserves the legacy single-process flow for debug. package.json: build:pglite-snapshot, test:slow, test:profile scripts. Measured wall-time on 16-core host: 100s warm (down from ~22 min cold single-process). 4 shards × ~640-1024 unit tests each, plus 9 E2E files each. PGLite snapshot saves 4.5× per cold init (828ms → 181ms). CHANGELOG.md updated with measured numbers + four-tier breakdown. --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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527b87bd1e |
v0.23.0 feat: gbrain dream synthesizes conversations into brain pages (v0.23.0) (#462)
* feat: dream_verdicts schema + engine methods Adds the v25 schema migration creating the dream_verdicts table (file_path, content_hash, worth_processing, reasons, judged_at; PRIMARY KEY (file_path, content_hash); RLS-enabled when running as a BYPASSRLS role). Distinct from raw_data (which is page-scoped) — transcripts being judged for synthesis aren't pages. The (file_path, content_hash) key means edited transcripts re-judge automatically. BrainEngine gains: - DreamVerdict + DreamVerdictInput types - getDreamVerdict(filePath, contentHash) → DreamVerdict | null - putDreamVerdict(filePath, contentHash, verdict) — ON CONFLICT upsert Both engines implement (postgres-engine.ts, pglite-engine.ts). This commit alone is functionally inert — nothing reads/writes the table yet. The synthesize phase (later commit) is the consumer. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat: trusted-workspace allow-list for subagent put_page Adds OperationContext.allowedSlugPrefixes — when set, put_page enforces slug membership in the allow-list instead of the legacy wiki/agents/<id>/... namespace. The trust signal is the SUBMITTER (PROTECTED_JOB_NAMES gates subagent submission so MCP can't reach this field), not the runtime ctx.remote flag — every subagent tool call has remote=true for auto-link safety, so basing trust on remote is incoherent. matchesSlugAllowList(slug, prefixes) helper supports glob suffix '/*' (recursive — wiki/originals/* matches ideas/foo/bar) and exact match for unsuffixed entries. put_page check shape: if (viaSubagent && allowedSlugPrefixes set) → allow-list check else if (viaSubagent) → existing namespace check (regression guard) else → no check (regular CLI) Auto-link is re-enabled for the trusted-workspace path so the cycle's extract phase doesn't have to recompute every edge after synthesize writes. Untrusted remote writes still skip auto-link as before. SubagentHandlerData.allowed_slug_prefixes is the wire field; the synthesize/patterns phases (later commit) populate it from a single source of truth in skills/_brain-filing-rules.json's dream_synthesize_paths.globs array. The model's tool schema description mirrors the allow-list so it writes correct slugs on the first try. IRON RULE security tests: - test/operations-allow-list.test.ts: allow-list ALLOW/REJECT, glob semantics, regression guard for the v0.15 namespace fallback when allow-list is unset, FAIL-CLOSED when subagentId is missing. - test/e2e/dream-allow-list-pglite.test.ts: end-to-end on PGLite, poisoned-transcript style write outside allow-list → REJECTED. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat: cycle scaffolding — 8-phase order + transcript discovery Extends ALL_PHASES from 6 → 8: synthesize between sync and extract, patterns between extract and embed. Codex finding #7: patterns MUST run after extract because subagent put_page sets ctx.remote=true and skips auto-link/timeline by default — extract is the canonical edge materialization step. Without that ordering, patterns reads stale graph state. Final order: lint → backlinks → sync → synthesize → extract → patterns → embed → orphans CycleOpts gains: - yieldDuringPhase callback — generic in-phase keepalive for long waits (synthesize fan-out, patterns roll-up). Renews cycle-lock TTL + worker job lock. Mirrors yieldBetweenPhases shape. - synthInputFile / synthDate / synthFrom / synthTo — forwarded to runPhaseSynthesize for the CLI's --input/--date/--from/--to flags. CycleReport.totals additively grows (no schema_version bump): transcripts_processed, synth_pages_written, patterns_written. src/core/cycle/transcript-discovery.ts is a pure filesystem walk: - .txt files only, sorted by path for determinism - date-prefixed basename filter (--date / --from / --to) - min_chars filter (default 2000) - exclude_patterns auto-wraps bare words as \b<word>\b regex (Q-3), power users may pass full regex with anchors - compileExcludePatterns is exported for unit tests Phase implementations land in the next commit; this one only adds the dispatcher slots so commit-by-commit bisect doesn't crash on import-not-found. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat: synthesize + patterns phases — gbrain dream actually dreams Synthesize phase (src/core/cycle/synthesize.ts) reads conversation transcripts from dream.synthesize.session_corpus_dir and writes brain-native pages: reflections to wiki/personal/reflections/..., originals to wiki/originals/ideas/..., timeline entries on existing people pages. Pipeline: 1. discoverTranscripts (filesystem walk + filters) 2. cooldown check via dream.synthesize.last_completion_ts config (default 12h; bypassed by --input/--date/--from/--to) 3. cheap Haiku verdict per transcript, cached in dream_verdicts table keyed by (file_path, content_hash) — backfill re-runs skip already-judged transcripts at zero cost 4. fan-out: one Sonnet subagent per worth-processing transcript dispatched with allowed_slug_prefixes (read from skills/_brain-filing-rules.json's dream_synthesize_paths.globs) and idempotency_key dream:synth:<file_path>:<content_hash> 5. wait via waitForCompletion; yieldDuringPhase ticks every child terminal so the cycle-lock TTL refreshes on long backfills 6. collect slugs from subagent_tool_executions for each child (codex finding #2: NOT pages.updated_at, which would pick up unrelated writes) 7. orchestrator dual-write — query each new page from DB, reverse-render via serializeMarkdown, write file to brain_dir. Subagent never gets fs-write access. 8. deterministic summary index page at dream-cycle-summaries/<date> (codex finding #4: slug shape is regex-compatible — no underscores, no .md extension) 9. write completion timestamp ONLY on successful runs Patterns phase (src/core/cycle/patterns.ts) runs after extract so the graph state is fresh. Single Sonnet subagent gathers reflections within dream.patterns.lookback_days (default 30); names a pattern only when ≥dream.patterns.min_evidence (default 3) reflections support it. Same allow-list path as synthesize. CLI flags on `gbrain dream` (src/commands/dream.ts): --input <file> ad-hoc transcript synthesis (implies --phase synthesize; bypasses cooldown) --date YYYY-MM-DD restrict synthesize to one date --from <d> --to <d> backfill range --dry-run runs Haiku verdict (cached), skips Sonnet synthesis. NOT zero LLM calls (codex #8). Conflict detection: --input + --date/--from/--to exits 2. ISO 8601 date format validated; range start > end exits 2. Auto-commit / push deferred to v1.1 (codex finding #5). v1 writes files to brain_dir; user or autopilot handles git. Tests: - test/cycle-patterns.test.ts: structural assertions on the patterns phase (queue + waitForCompletion wired, allow-list threading, subagent_tool_executions provenance, no raw_data dependency). - test/dream-cli-flags.test.ts: argv parsing, conflict detection, ISO date validation, --input implies --phase synthesize, dry-run semantics doc string. - test/e2e/dream-synthesize-pglite.test.ts: 8 cases on PGLite in-memory exercising not_configured, empty corpus, no API key skip path, dry-run, cooldown active vs --input bypass, and the dream_verdicts cache hit path. Per-test rig isolation (each test creates and tears down its own engine) avoids cross-test PGLite WASM contention. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: dream cycle v0.27.0 — skills, CLAUDE.md, migration, changelog - skills/maintain/SKILL.md: synthesize + patterns phases documented with quality bar (Iron Law for synthesis), trust boundary, idempotency, cooldown semantics, CLI invocation patterns. New triggers added so "process today's session" / "synthesize my conversations" route here. - skills/RESOLVER.md: dream cycle triggers route to maintain. - skills/_brain-filing-rules.md: directory table for the five output types (reflections, originals, patterns, people enrichment, cycle summary) with slug shape per row; Iron Law repeated. - skills/migrations/v0.27.0.md: agent-readable migration narrative. Schema migration v25 runs automatically on `gbrain apply-migrations`; synthesize ships disabled by default — opt-in via dream.synthesize.session_corpus_dir + dream.synthesize.enabled. - CLAUDE.md: file inventory updated with new files (cycle/synthesize.ts, cycle/patterns.ts, cycle/transcript-discovery.ts), the 8-phase ordering, the trusted-workspace allow-list trust model, and the v25 schema migration line in the migrate.ts entry. - VERSION: 0.20.4 → 0.27.0 - CHANGELOG.md: v0.27.0 release-summary section per CLAUDE.md voice rules (numbers that matter table, what-this-means closer, "to take advantage of" block), followed by the itemized changes. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test: add patterns E2E + 8-phase cycle E2E + bump synth-cooldown timeouts Two new E2E test files on PGLite (no DATABASE_URL or API key required): - test/e2e/dream-patterns-pglite.test.ts (6 cases) — exercises runPhasePatterns skip paths against a real engine: disabled, default-enabled-but-insufficient-evidence, no-API-key, dry-run. Sibling of dream-synthesize-pglite.test.ts; same per-test rig pattern for engine isolation. - test/e2e/dream-cycle-eight-phase-pglite.test.ts (5 cases) — end-to-end runCycle with the v0.27 8-phase order. Asserts: ALL_PHASES is the documented 8 phases in the right sequence, the dry-run report's phases array preserves that order, CycleReport.totals carries the new transcripts_processed / synth_pages_written / patterns_written fields, --phase synthesize and --phase patterns each run only that phase, and synthInputFile is plumbed correctly through runCycle to runPhaseSynthesize. Bump per-test timeout to 30s on the two synthesize-cooldown E2E tests that create two PGLite engines back-to-back. Default Bun 5s budget is tight under sustained suite pressure (PGLite WASM init costs ~1-2s per engine on macOS); each test passes alone but flakes in the full E2E suite. The third arg `30_000` is Bun's standard test-timeout knob. Full E2E suite (test/e2e/) now: 86 pass / 0 fail / 258 skip. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: ship-prep — typecheck fixes, llms.txt regen, 8-phase test update - src/core/cycle/synthesize.ts + patterns.ts: PageType 'default' → 'note' (TS strict typecheck rejected 'default'; 'note' is a valid PageType for orchestrator-written summary index pages and reverse-render fallback). - src/core/pglite-engine.ts: re-import DreamVerdict + DreamVerdictInput types after the master merge dropped them from the import line. - test/e2e/dream-allow-list-pglite.test.ts: ToolCtx now requires remote: true literal; thread it through every put_page tool call. - test/e2e/dream-patterns-pglite.test.ts: PageType 'default' → 'note' in the seedReflections helper. - test/core/cycle.test.ts: bump expected hook-call count + phase count 6 → 8 to match v0.27 ALL_PHASES extension. - llms-full.txt: regenerate against the updated CHANGELOG + CLAUDE.md so the committed snapshot matches what the generator now produces. Full bun test suite: 2793 pass / 0 fail / 258 skip (3051 tests, 177 files). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: update README + INSTALL_FOR_AGENTS for v0.27.0 dream cycle README: maintain skill row mentions synthesize/patterns; gbrain dream command-reference block describes the 8-phase pipeline and the new --input/--date/--from/--to flags. INSTALL_FOR_AGENTS: dream cycle bullet calls out v0.27 conversation synthesis + cross-session pattern detection. Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com> * chore: renumber v0.27.0 → v0.23.0 Master is at v0.22.5; v0.23.0 is the next natural slot for the dream-cycle synthesize + patterns release. Bulk rename across VERSION, package.json, CHANGELOG, migration file, source comments, skills, and llms.txt bundles. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test(e2e): bump cycle.test.ts phase count 6 → 8 The dry-run full-cycle test asserted 6 phases. v0.23 added synthesize and patterns, bringing the total to 8. The unit-side equivalent (test/core/cycle.test.ts) was already updated; this catches the E2E sibling that surfaced after the latest master merge. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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e96f054cf0 |
v0.22.13 feat: parallel sync — bounded concurrent imports (#490)
* feat: parallel sync — bounded concurrent imports (#489) gbrain sync --concurrency N (alias --workers N) parallelizes the import phase using per-worker Postgres engine instances with an atomic queue index (same proven pattern as gbrain import --workers N). Auto-concurrency: when a sync touches >100 files and the user didn't explicitly set --concurrency, defaults to 4 workers. Small incremental syncs (<50 files) stay serial. Full syncs auto-detect Postgres and default to 4 workers. Minion sync handler defaults to concurrency=4, configurable via job params: {"concurrency": 8}. Delete and rename phases remain serial (order-dependent, fast). PGLite falls back to serial automatically (single-connection engine). Changes: - src/commands/sync.ts: SyncOpts.concurrency, parallel import loop in performSync incremental path, --workers passthrough in performFullSync - src/commands/jobs.ts: sync handler accepts concurrency param (default 4) - CHANGELOG.md: v0.23.0 parallel sync entry All 37 existing sync tests pass. Typecheck clean. * feat: shared concurrency policy + db-lock primitive src/core/sync-concurrency.ts — single source of truth for autoConcurrency() + parseWorkers() + shouldRunParallel() + constants. Replaces three drifted call-site policies (performSync, performFullSync, jobs handler). src/core/db-lock.ts — generic tryAcquireDbLock(engine, lockId, ttlMinutes) over the existing gbrain_cycle_locks table. Parameterized lock id so performSync (gbrain-sync) can nest cleanly under cycle.ts (gbrain-cycle) without deadlock. test/sync-concurrency.test.ts — 17 cases covering PGLite-forces-serial, explicit override clamping, auto-path threshold, parseWorkers validation (rejects 0, negatives, NaN, decimals, trailing chars). No consumers yet; subsequent commits wire sync.ts, import.ts, and jobs.ts to use these helpers. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: harden performSync — writer lock, head-drift gate, engine.kind CODEX-2: wrap performSync body in a gbrain-sync DB lock so two concurrent syncs (manual + autopilot, two terminals, two Conductor workspaces) cannot both read last_commit, both write it unconditionally, and let the last writer win. cycle.ts continues to hold gbrain-cycle for its broader scope; the two ids nest cleanly. CODEX-3: capture git HEAD at sync entry, re-rev-parse after the import phase, refuse to advance last_commit if HEAD drifted (someone ran git checkout / git pull mid-sync). Vanished files now go into failedFiles instead of silent-skip — same gating mechanism, no more bookmark advance past unimported work. A1: replace both PGLite detection sites with engine.kind === 'pglite'. The constructor.name sniff is gone (breaks under bundling) and so is the inconsistent config?.engine string check. A2: connect worker engines serially into an array, run inside try/finally so disconnect always fires — even on partial connect failure, OOM, or mid-import abort. Prior Promise.all(...disconnect) leaked the 8 worker connections on any panic path. Q1: explicit --workers / opts.concurrency now bypasses the >50-file floor. User opt-in beats the auto-path safety net. Q3: drop the config!.database_url! non-null assertions; fall back to serial when database_url is unset instead of crashing on TypeError. Q4: worker-count banner moves from console.log to console.error so stdout stays clean for --json output. test/sync-parallel.test.ts — 7 cases over PGLite covering the bookmark gate under concurrency request, the head-drift gate, vanished-file failure capture, PGLite-stays-serial, and the writer-lock contract. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: import.ts — engine.kind discriminator, worker try/finally, parseWorkers A1: replace the config?.engine === 'pglite' string sniff with engine.kind === 'pglite' to match sync.ts and the v0.13.1 contract. A2: wrap worker engine creation + the parallel loop in try/finally so disconnects always fire — same pattern as sync.ts. Worker engines now push onto an array as they connect (rather than Promise.all) so the finally block can clean up partial-connect state. Q2: route --workers parsing through the shared parseWorkers() helper. parseInt-with-no-validation is gone — '0', '-3', 'foo', '1.5' now exit with a clear error message instead of silently falling through. Q3: drop the config!.database_url! non-null assertion; fall back to serial when database_url is unset. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: jobs.ts sync handler — resolve sourceId, autoConcurrency CODEX-1: resolve sourceId at handler entry by looking up sources.local_path. Mirrors cycle.ts:480's autopilot-cycle fix (PR #475). Without this, every Minion sync job on a multi-source brain reads global config.sync.last_commit instead of the per-source anchor, which on a regularly-GC'd repo can drop out of git history and trigger 30-min full reimports every cycle. The handler accepts an optional sourceId job param for callers that want to override; falls back to the resolveSourceForDir lookup when absent. CODEX-4: replace the hardcoded concurrency=4 default with the shared autoConcurrency policy. Behavior is now consistent between CLI sync, the Minion handler, and the autopilot cycle's sync phase. Jobs that request a specific concurrency via job.data.concurrency still win. noEmbed default stays at true — embed is a separate job (submit gbrain embed --stale, OR rely on the autopilot cycle's embed phase). The doc comment makes that contract explicit. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test: e2e parallel sync against real Postgres + benchmark DATABASE_URL-gated E2E coverage that PGLite-only tests can't reach: T2 — happy path: 60 files imported at concurrency=4, all 60 pages land in the DB, with a pg_stat_activity probe before/after to confirm worker engines (4 × 2 connections) actually disconnected. P4 — benchmark: 120-file fixture, serial vs concurrency=4 timing. Emits a single-line `SYNC_PARALLEL_BENCH 120 files | serial=Xms | parallel(4)=Yms | speedup=Zx` so the CHANGELOG can quote a real number instead of an unbacked '~4×' claim. Asserts parallel <= serial * 1.5 to allow for noisy CI but fail genuine regressions. Skips gracefully when DATABASE_URL is unset (consistent with the rest of test/e2e/). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: v0.22.10 release notes + sync follow-up TODO VERSION + package.json + bun.lock: 0.22.5/0.22.6 → 0.22.10. Repo had existing drift between VERSION and package.json on master; this commit brings them back in sync at the bumped value. CHANGELOG.md: v0.22.10 entry replaces the unfinished v0.23.0 stub from PR #490's original commit. Voice-rule clean (no em dashes, no AI vocabulary), real benchmark numbers from the new E2E test (serial=289ms parallel(4)=221ms speedup=1.31x), additive worker-pool note (A3), 'To take advantage of v0.22.10' self-repair block per CLAUDE.md convention. TODOS.md: A4 follow-up filed — plumb resolved database_url through SyncOpts so performSync / performFullSync / import.ts don't each call loadConfig() separately. Deferred to a future patch; not on the v0.22.10 critical path. Patch (not minor) framing held even though new CLI surface lands here; release-notes prose names the behavior change explicitly so users know to read them. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: update CLAUDE.md + README for v0.22.10 sync hardening CLAUDE.md: - New "Key files" entries for src/core/sync-concurrency.ts and src/core/db-lock.ts (both v0.22.10). - New "Key files" entry for src/commands/sync.ts (covers the lock, head-drift gate, engine.kind discriminator, vanished-file failure capture, parallel branch wiring). - Updated src/commands/jobs.ts entry with v0.22.10 sourceId resolution + autoConcurrency policy + noEmbed contract. - Added test/sync-concurrency.test.ts and test/sync-parallel.test.ts to the unit-test list with case counts. - Added test/e2e/sync-parallel.test.ts to the E2E section with the SYNC_PARALLEL_BENCH grep marker for CHANGELOG quoting. - Added "Key commands added in v0.22.10" section: gbrain sync --workers, gbrain import --workers (parseWorkers validation). README.md: added --workers flag to the IMPORT section's gbrain sync and gbrain import lines, with the >100-file auto-parallelize note. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: bump version slot to v0.22.13 VERSION 0.22.10 → 0.22.13. Master moved to 0.22.8 plus claimed slots 0.22.9-0.22.12 in sibling workspaces; 0.22.13 is the next free slot for this PR's parallel-sync hardening work. Updated all v0.22.10 references in CHANGELOG.md (release header + self-repair block), TODOS.md (D-PR490-1 follow-up tag), CLAUDE.md (Key files entries + tests + commands subsection), and the inline v0.22.10 markers in src/core/sync-concurrency.ts, src/core/db-lock.ts, src/commands/sync.ts, src/commands/import.ts, src/commands/jobs.ts, test/sync-parallel.test.ts, test/e2e/sync-parallel.test.ts. No behavioral change. CHANGELOG header rewrite, content unchanged. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: regenerate llms-full.txt for v0.22.13 doc updates CI's build-llms generator test failed because llms-full.txt was stale relative to the README + CLAUDE.md updates this PR added (--workers flag in the IMPORT section, sync-concurrency.ts/db-lock.ts/sync.ts entries in the Key files section). Per CLAUDE.md: "Run \`bun run build:llms\` after adding a new doc." The test test/build-llms.test.ts:67 verifies committed bundles match generator output — now they do again. llms.txt was already in sync (no curated config additions); only llms-full.txt needed the regen. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: root <root@localhost> Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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v0.22.11 feat: storage tiering — db_tracked vs db_only directories (#494)
* feat: storage tiering — git-tracked vs supabase-only directories Brain repos scaling to 200K+ files. Bulk data (tweets, articles, transcripts) bloats git repos and slows operations. New storage config in gbrain.yml lets users declare git-tracked and supabase-only directories. Changes: - New config: storage.git_tracked and storage.supabase_only in gbrain.yml - gbrain sync auto-manages .gitignore for supabase-only paths - gbrain export --restore-only restores missing supabase-only files from DB - New gbrain storage status command shows tier breakdown - Config validation warns on conflicts - 8 tests passing, full docs at docs/storage-tiering.md Backward compatible — systems without gbrain.yml work unchanged. * feat: add getDefaultSourcePath() typed accessor (step 1/15) Single source of truth for "what brain repo are we operating against?" Replaces ad-hoc raw SQL in storage.ts:38 (Issue #3 of eng review). Used by both gbrain storage status and gbrain export --restore-only. Returns null on miss, throws on DB error. Composes with the existing resolveSourceId chain so it honors --source flag / GBRAIN_SOURCE env / .gbrain-source dotfile / longest-prefix CWD match / brain-level default. 4 new test cases covering happy path, missing local_path, DB error propagation, and CWD-prefix resolution priority. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: replace gray-matter with dedicated YAML parser (step 2/15) The original storage-config.ts called gray-matter on a delimiter-less YAML file. Gray-matter only parses YAML inside `---` frontmatter blocks; without delimiters, it returns `{data: {}}`. Result: loadStorageConfig() always returned null, the entire feature was a silent no-op for every user. Original eng review's P0 confidence-9 finding (Issue #1). Replaces gray-matter with a small dedicated parser for the gbrain.yml shape (top-level `storage:` section, two array-valued nested keys). Yaml-lite was considered first, but its flat key:value design doesn't handle nested arrays. The dedicated parser is ~50 lines and trades expressiveness for zero-dep, predictable parsing of a file format we control. Adds the Issue #1B sanity warning (locked B): when gbrain.yml exists but has no storage section (or empty arrays), warn once-per-process so the user sees their config didn't take. The single test that would have caught the original P0 — write a real gbrain.yml, call loadStorageConfig, assert non-null — now exists. Also tightens loadStorageConfig per D36: distinguishes "absent" (silent null) from "unreadable" (throws). The previous code silently swallowed read errors, hiding broken installs. 8 new test cases: real-disk happy path, comments + blank lines, quoted values, missing storage section warning, empty section warning, once-per-process warning suppression, unreadable file behavior, and the existing helper tests (validation, tier matching, edge cases) all still pass. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * refactor: rename storage keys to db_tracked/db_only (step 3/15) The vendor-specific names "supabase_only" and "git_tracked" hardcoded a backend (Supabase) into the config schema. gbrain ships two engines — PGLite and Postgres-via-Supabase. The canonical distinction is "lives in the brain DB only" vs "lives in the brain DB and on disk under git." Both work on either engine. Renamed throughout (Issue #4 of eng review): git_tracked → db_tracked supabase_only → db_only isGitTracked() → isDbTracked() isSupabaseOnly() → isDbOnly() StorageTier 'git_tracked'/'supabase_only' → 'db_tracked'/'db_only' Backward compatibility (D3 lock): loadStorageConfig accepts both shapes. Loader resolution order per the eng-review pass-2 finding: parse YAML → if canonical keys present use them, else if deprecated keys present map to canonical AND emit once-per-process deprecation warning → THEN run validation. Validation always sees the canonical shape so error messages reference db_tracked/db_only regardless of which keys the user wrote. The deprecation warning suggests `gbrain doctor --fix` for an automated rename (D72 — fix path lands in step 7). When both shapes coexist in one file, canonical wins and a stronger warning fires ("deprecated keys ignored — remove them"). Aliases isGitTracked/isSupabaseOnly kept for now to avoid churning the sync.ts / export.ts / storage.ts call sites in this commit; they'll be removed in a follow-up step. Storage.ts's tier-bucket initializers and output strings updated. ASCII output replaces unicode box-drawing per D10. gbrain.yml example file updated to canonical keys with explanatory comments. 2 new test cases: deprecated-key fallback (asserts both shapes load correctly with warning), canonical-wins-over-deprecated (asserts the "both shapes coexist" path). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat: add slugPrefix to PageFilters with engine-side filter (step 4/15) Issue #13 of the eng review: storage.ts and export.ts loaded every page in the brain (limit: 1_000_000) to check tier membership. On the 200K-page brains this feature targets, that's the wall-clock and memory landmine the feature exists to fix. Adds an optional `slugPrefix` field to PageFilters. Both engines implement it as `WHERE slug LIKE prefix || '%' ESCAPE '\'`, with literal escaping of LIKE metacharacters (%, _, \) so user-supplied prefixes like `media/x/` are treated as exact string prefixes. Performance: the (source_id, slug) UNIQUE constraint on the pages table gives both engines a btree index that supports LIKE-prefix range scans. An EXPLAIN on Postgres confirms the index range scan rather than a seq scan. PGLite has the same index shape via pglite-schema.ts. Consumers updated: - export.ts: --slug-prefix flag now goes engine-side (no in-memory .filter(...)). The --restore-only path queries each db_only directory with slugPrefix in a loop instead of one full-table scan, with seen-set deduplication and disk-existence check inline. - storage.ts: keeps the full-scan path because storage-status needs the "unspecified" bucket count, which can't be computed without enumerating every page. Comment notes that step 5 (single-walk filesystem scan) will reduce per-page disk syscall cost. 2 new test cases on PGLiteEngine: slugPrefix happy path (3 tier dirs, asserts only matching slugs return) and metacharacter escape regression (asserts safe/ doesn't match unrelated slugs). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * perf: single-walk filesystem scan via walkBrainRepo() (step 5/15) Issue #14 of the eng review: storage.ts called existsSync + statSync per-page in a synchronous loop. On a 200K-page brain that's 400K syscalls serialized. Wall-clock landmine. Adds src/core/disk-walk.ts with walkBrainRepo(repoPath) — one recursive readdirSync walk, builds a Map<slug, {size, mtimeMs}>. Storage.ts looks up each DB page in the map (O(1)) instead of stat-checking on demand. Slug derivation matches the pages-table convention: people/alice.md on disk becomes people/alice as the map key. Skipped during walk: - dot-directories (.git, .gbrain, .vscode, etc) — not part of the brain namespace - node_modules — guards against accidentally walking into imported repos - non-.md files (sidecar JSON, binaries) — tracked by the brain through the files table, not by slug Reusable: future commands (gbrain doctor's storage_tiering check, the optional autopilot tier-fix path) get the same walk for free. 9 new test cases: empty dir, nonexistent dir, top-level files, nested dirs, dot-dir skipping, node_modules skipping, non-.md filtering, size capture, mtimeMs capture. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: path-segment matching for tier directories (step 6/15) Issue #5 + D6 of the eng review: tier matching used slug.startsWith(dir), which falsely matches 'media/xerox/foo' against 'media/x' if a user wrote the directory without a trailing slash. The new matcher requires the configured directory to end with `/` and treats it as a canonical path-segment ancestor: media/x/ matches media/x/tweet-1 ✓ media/x/ doesn't media/xerox/foo ✗ media/x refused media/x/tweet-1 (matcher requires trailing /) Non-canonical input (no trailing slash) is refused outright. Step 7's auto-normalizing validator converts user-written 'media/x' → 'media/x/' on load, so the matcher never sees non-canonical input from real configs. The behavior tested here is the strict matcher's contract. Regression test pins the media/xerox collision case explicitly. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat: auto-normalize trailing-slash, throw on tier overlap (step 7/15) D7+D8 of the eng review: validation was warnings-only. Users miss warnings. Now: - Cosmetic: missing trailing slash auto-corrected, one-time info note showing what changed ("normalized 2 storage paths: 'people' → 'people/', 'media/x' → 'media/x/'"). Once-per-process to keep noise low. - Semantic: same directory in both tiers throws StorageConfigError. Ambiguous routing — does media/ win as db_tracked or db_only? — is a real bug the user must fix. Caller propagates to the CLI for a clean exit-1 with actionable message. loadStorageConfig now applies normalize+validate after merging deprecated keys, so the path-segment matcher (step 6) only ever sees canonical trailing-slash directories. The pure validateStorageConfig kept for callers who want the warnings list without the auto-fix side effects (gbrain doctor's reporting path). 2 new test cases: auto-normalize round-trip with warning text assertion, overlap throws StorageConfigError. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: wire manageGitignore into runSync, only on success (step 8/15) Issue #2 of the eng review: manageGitignore was defined and never invoked. Docs claimed "auto-managed by gbrain" — false. Users hit a .gitignore that never updated and committed db_only directories anyway. Wire-up: runSync now calls manageGitignore after each successful performSync return, in both watch and one-shot modes. Eng review pass-2 finding #1: skip on dry_run AND blocked_by_failures status. A sync that aborted partway has stale state; mutating .gitignore based on a partially-loaded config invites drift. Failure-skip test added (uses .gitignore-as-a-directory to simulate write failure; asserts warning fired and disk wasn't corrupted). Hardened manageGitignore itself with three additional behaviors: - GBRAIN_NO_GITIGNORE=1 escape hatch (D23) for shared-repo setups where a maintainer wants gbrain to leave .gitignore alone. - Submodule detection (D49). When repoPath/.git is a regular file (gitdir: ... pointer), the repo is a git submodule. Submodule .gitignore changes don't survive parent submodule updates, so we skip with an actionable warning ("add db_only directories to your parent repo's .gitignore manually"). - Graceful failure (D9). Read errors, write errors, and StorageConfigError (overlap from step 7) all log a warning and return — sync's primary job (moving data) shouldn't die because of a side-effect on .gitignore. manageGitignore is now exported (previously private) so the storage-sync test file can hit it directly without spinning up sync. 9 new test cases: no-op without gbrain.yml, no-op with empty db_only, happy-path append, idempotency (run twice, single entry), preservation of user-written rules, GBRAIN_NO_GITIGNORE skip, submodule skip, .git-directory normal path, write-failure graceful warning. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: D5 resolution chain for --restore-only and storage status (step 9/15) D5 of the eng review: gbrain export --restore-only without --repo silently fell through to the regular export path, dumping every page in the database to the wrong directory. Hard regression risk. Now exits 1 with an actionable message when --restore-only has no --repo AND no configured default source. Resolution order: 1. Explicit --repo flag 2. Typed sources.getDefault() (reuses step 1's accessor) 3. Hard error — never fall through to cwd storage.ts:38 also bypassed BrainEngine with raw SQL and a bare try/catch (Issue #3 + Issue #9). Replaced with the same typed getDefaultSourcePath() — single source of truth, errors propagate cleanly to the user, no silent cwd fallback. Regular export (no --restore-only) keeps its current behavior per D26: exports include everything, --repo is optional. 4 new test cases on PGLite in-memory: - hard-errors with no --repo + no default - explicit --repo wins - falls back to sources default local_path - non-restore export does not require --repo Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * refactor: split storage.ts into pure data + JSON + human formatters (step 10/15) Issue #10 of the eng review: getStorageStatus and runStorageStatus mixed data gathering, JSON serialization, and human-readable output in one function. Hard to test, hard to reuse, mismatched the orphans.ts pattern that CLAUDE.md cites as the precedent. Now three pure functions + a thin dispatcher: getStorageStatus(engine, repoPath) — async, returns StorageStatusResult. Side effects: engine.listPages + one walkBrainRepo (Issue #14). Exported so MCP exposure (D14) and gbrain doctor (D13) can consume the same data without re-running the loop. formatStorageStatusJson(result) — pure, returns indented JSON. Stable contract on the StorageStatusResult shape, suitable for orchestrators. formatStorageStatusHuman(result) — pure, returns ASCII text (D10 — no unicode box-drawing). Composable into other commands later. runStorageStatus(engine, args) — thin dispatcher: parses --repo / --json, calls getStorageStatus, picks a formatter, prints. 8 new test cases on the formatters: JSON parse round-trip, null-config fallback, missing-files capped at 10 with rollup, ASCII-only assertion (D10 regression guard), warnings inline, configuration listing, disk- usage block omitted when zero bytes. The StorageStatusResult interface is now exported as a public type, so gbrain doctor's storage_tiering check can build its own findings from the same shape. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * types: distinct PageCountsByTier and DiskUsageByTier (step 11/15) Issue #11 of the eng review: pagesByTier (page counts) and diskUsageByTier (byte totals) shared the same structural type (Record<StorageTier, number>). Both are tier-keyed numeric maps but carry semantically different units. A future bug that swaps them at a call site (e.g., displaying disk bytes where the count belongs) wouldn't trip the compiler. Replaced with distinct nominal types via a brand field. Structurally identical at runtime (no overhead) but compile-time disjoint — TypeScript catches accidental cross-assignment. PageCountsByTier { db_tracked, db_only, unspecified } : numbers (count) DiskUsageByTier { db_tracked, db_only, unspecified } : numbers (bytes) Both initialized in getStorageStatus, both threaded into StorageStatusResult, both consumed by formatStorageStatusHuman / formatStorageStatusJson without further changes. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat: PGLite soft-warn + full lifecycle test (step 12/15) D4: storage tiering on PGLite is a partial feature. The "DB" the pages live in IS the local file gbrain uses for everything else, so "db_only" has no real offload effect. The .gitignore management still helps (keeps bulk content out of git history), so we warn and proceed — not refuse. Two warning sites (once-per-process each via module-local flags): - storage status: warns at runStorageStatus entry - sync: warns inside manageGitignore when engineKind='pglite' and config has db_only entries Both phrased actionably ("To get full tiering, migrate to Postgres with `gbrain migrate --to supabase`"). manageGitignore signature now takes an optional `engineKind` param. runSync passes engine.kind. Stand-alone callers (tests, future gbrain doctor --fix path) can omit it. New test: test/storage-pglite.test.ts — D8 + D4 lifecycle. 6 cases: engine.kind assertion, getStorageStatus loading gbrain.yml + reporting tier counts, manageGitignore PGLite-warn (once per process), Postgres no-warn, slugPrefix on PGLite, end-to-end (config + putPage + status + gitignore). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: add trailing-newline CI guard (step 14/15) Issue #7 of the eng review: all four new files in the original storage-tiering branch lacked POSIX trailing newlines. Linters complain, git diffs phantom-flag every future edit. We've been adding newlines as each file landed; this commit catches the regression class. scripts/check-trailing-newline.sh: - sibling to check-jsonb-pattern.sh / check-progress-to-stdout.sh per CLAUDE.md's CI guard pattern - portable to bash 3.2 (macOS default; no mapfile, no associative arrays) - covers src/**, test/**, gbrain.yml, top-level *.md - reports each missing file by path and exits 1 Wired into `bun run test` between progress-to-stdout and typecheck. Also fixed docs/storage-tiering.md (pre-existing missing newline from the original branch — caught by the new guard on first run). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * docs: v0.23.0 — VERSION, CHANGELOG, README, CLAUDE.md, storage-tiering.md (step 15/15) VERSION → 0.23.0 (minor bump for new feature surface). CHANGELOG entry in Garry voice with the canonical format: - Two-line bold headline ("Storage tiering, finally working...") - Lead paragraph naming what was broken before and what users get now - "Numbers that matter" before/after table for the 6 things that actually changed - "What this means for your brain" closer - "To take advantage of v0.23.0" self-repair block (per CLAUDE.md convention) — 6 numbered steps users can follow - Itemized changes split into critical fixes / new+renamed surface / architecture cleanup / tests + CI guards CLAUDE.md "Key files" gains four new entries: storage-config.ts, disk-walk.ts, the v0.23.0 storage.ts shape, and gbrain.yml itself. README.md gains a new "Storage tiering" section between Skillify and Getting Data In with the canonical example + commands + link to the full guide. docs/storage-tiering.md rewritten end-to-end with canonical key names (db_tracked / db_only), v0.23.0 hardening details (idempotency, submodule detection, GBRAIN_NO_GITIGNORE, dry-run gating), the resolution chain for --restore-only, the auto-normalize + throw-on-overlap validator, and the PGLite engine note. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * test: e2e Postgres lifecycle for storage tiering (step 16/16) Per the v0.23.0 plan: full lifecycle E2E against real Postgres. - engine.kind === 'postgres' assertion - Full lifecycle: write 4 pages (1 db_tracked, 2 db_only, 1 unspecified) → getStorageStatus reports correct tier counts → human formatter renders → manageGitignore writes managed block → idempotency check → getDefaultSourcePath() resolves the configured local_path. - Container restart simulation: 2 db_only pages in DB, files missing on disk → status.missingFiles.length === 2 → slugPrefix engine filter on Postgres returns exactly the tier slugs. - slugPrefix index-based range scan regression: 50 media/x/* + 50 people/p-* pages → slugPrefix='media/x/' returns exactly 50. - getDefaultSourcePath returns null when default source has no local_path (the hard-error path that replaces the original silent cwd fallback). - manageGitignore on Postgres engine does NOT emit the PGLite soft-warn (cross-engine assertion). Skips gracefully when DATABASE_URL is unset, per CLAUDE.md E2E pattern. Run via: DATABASE_URL=... bun test test/e2e/storage-tiering.test.ts Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: rebump version 0.23.0 → 0.22.9 Reverts the minor bump back to a patch-style version on the v0.22 line. Storage tiering ships within the v0.22.x train alongside the recent fix waves. Updates VERSION, package.json, CHANGELOG header + body refs, CLAUDE.md Key files annotations, README.md section heading, and the docs/storage-tiering.md backward-compat note. * chore: bump version 0.22.9 → 0.22.11 Sibling workspaces claimed v0.22.10 in the queue. This branch advances to v0.22.11 to keep the version monotonic on master. Updates VERSION, package.json, CHANGELOG header + body refs, CLAUDE.md Key files annotations, README.md section heading, and the docs/storage-tiering.md backward-compat note. * fix: address Codex pre-landing review findings (4 fixes) Codex found 4 real issues during pre-landing review of v0.22.11 diff: [P0] export --restore-only fell through to full export when storageConfig was null (no gbrain.yml present). On older or misconfigured brains, the recovery command would silently dump the entire database. src/commands/export.ts now refuses with an actionable error before any page query fires — matches the D5 lock spirit ("never silently fall through"). [P1] manageGitignore wire-up only fired when --repo was passed explicitly. performSync resolves the repo from sync.repo_path or sources.local_path, so the common `gbrain sync` path (after setup, no flag) never updated .gitignore. src/commands/sync.ts now uses the same source-resolver chain as the rest of /ship: opts.repoPath → getDefaultSourcePath → null. Fires in both watch and one-shot modes. [P2] getDefaultSourcePath only consulted sources.local_path, missing the legacy global sync.repo_path config key that pre-v0.18 brains use. Added a fallback to engine.getConfig('sync.repo_path') when the sources row has NULL local_path. Pre-v0.18 brains now work without forcing a `gbrain sources add . --path .` migration. [P2] sync --all multi-source loop never called manageGitignore even though src.local_path was already known. Each source now gets its own gitignore update on successful sync. Tests: - test/storage-export.test.ts: replaced the old "falls through to full export" test with one that asserts the new refusal path (storage-tiering config required for --restore-only). - test/source-resolver.test.ts: added a fallback test exercising the legacy sync.repo_path code path for pre-v0.18 brains. - All 78 storage-tiering tests still pass. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * chore: regenerate llms.txt + llms-full.txt for v0.22.11 Per CLAUDE.md: "Run `bun run build:llms` after adding a new doc." The README's new Storage tiering section + the rewritten docs/storage-tiering.md changed the inlined bundle. test/build-llms.test.ts catches the drift and was failing on master pre-regen. * fix: typecheck error in disk-walk.ts (CI #73350475897) tsc --noEmit failed in CI because ReturnType<typeof readdirSync> with withFileTypes:true picks an overload union that includes Dirent<Buffer<ArrayBufferLike>>. Strict tsc treats entry.name as Buffer, so .startsWith / .endsWith / string comparisons all blew up. Annotate the variable as Dirent[] (string-based) and cast through unknown, matching the pattern sync.ts already uses for its own filesystem walk. Same runtime behavior; clean typecheck. Tests still 9/9. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> EOF --------- Co-authored-by: root <root@localhost> Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |