7267462311 v0.31.4 feat: takes v2 — lessons from 100K-take production extraction (#795)
* feat: takes v2 — lessons from 100K-take production extraction

Consolidates everything learned from the first full takes extraction run
(28,256 pages, 100,720 takes, $361 on Azure GPT-5.5) and subsequent
cross-modal eval (GPT-5.5 + Opus 4.6, scored 6.8/10 overall).

## Fixes

**fix(cli): add recall and forget to CLI_ONLY set**
v0.31 added these commands to handleCliOnly() but forgot the gate set.
Both fell through to cliOps.get() → 'Unknown command'.

**feat(synthesize): auto-enable when corpus dir is configured**
Setting session_corpus_dir is now sufficient — enabled defaults to true
when a corpus dir is set. Explicit enabled=false still wins. Eliminates
the footgun where users configure a corpus dir and nothing happens.

**feat(engine): round takes weights to 0.05 increments**
Cross-modal eval found false precision (0.74, 0.82) implies calibration
accuracy that doesn't exist. Both postgres and pglite engines now round
on insert. 1.0 and 0.0 are preserved exactly.

## Documentation

**docs: takes-vs-facts architectural distinction**
New doc explaining the two epistemological layers, why they must never be
conflated, how the dream cycle consolidate phase bridges them, and
production extraction data (model selection, eval dimensions, key
learnings for extraction prompts).

**docs(takes-fence): clarify holder semantics with eval examples**
Holder = who HOLDS the belief, NOT who it's ABOUT. Expanded JSDoc with
concrete right/wrong examples from the cross-modal eval. Additional
rules: amplification ≠ endorsement, self-reported ≠ verified, founder
describing company → people/founder not companies/slug.

## Tests (17 new, all passing)

- 5 synthesize-enabled-default tests
- 6 takes-holder-semantics tests
- 6 takes-weight-rounding tests

## Cross-Modal Eval Context

| Dimension         | GPT-5.5 | Opus 4.6 | Avg  |
|-------------------|---------|----------|------|
| Accuracy          | 7       | 8        | 7.5  |
| Attribution       | 6       | 7        | 6.5  |
| Weight calibration| 7       | 7        | 7.0  |
| Kind classification| 6      | 7        | 6.5  |
| Signal density    | 7       | 6        | 6.5  |

Top improvements addressed in this PR:
1. Holder vs subject confusion (docs + tests)
2. Weight false precision (runtime enforcement)
3. Takes ≠ facts distinction (architectural doc)
4. Synthesis auto-enable (runtime fix)
5. recall/forget CLI routing (bug fix)

* docs(filing-rules): anchor takes attribution rules (EXP-3)

Adds a "Takes attribution" section to skills/_brain-filing-rules.md
distilling the 6 rules from docs/takes-vs-facts.md into a terse
contract that downstream agents (OpenClaw, Wintermute) can read as
their canonical filing surface.

Documentation only — no in-repo runtime consumer (synthesize.ts reads
the .json file, not the .md). EXP-4 lands the runtime parser-level
holder validation.

Codex review #9: relabels EXP-3 as documentation, not quality work.
The runtime check is EXP-4.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(takes): weight backfill v46 + NaN hardening at 4 sites (EXP-1, Hardening)

Migration v46 (takes_weight_round_to_grid): backfills pre-v0.32 takes.weight
to the 0.05 grid the engine layer (PR #795) enforces on insert. Cross-modal
eval over 100K production takes flagged 0.74, 0.82-style values as false
precision; this brings existing data to the same grid that all new writes
already use.

Tolerance-based comparison (abs > 0.001) avoids the float32-noise re-touch
loop that the naive `weight <> ROUND(...)` form would create — REAL/NUMERIC
comparison promotes weight to DOUBLE PRECISION first, surfacing ~1e-7
representation noise as inequality. The 0.05 grid is 5e-2, so any genuine
off-grid value clears the 1e-3 threshold cleanly.

`transaction: false` (codex review #2 correction): not for mid-statement
resume (a single SQL statement either completes or rolls back). What it
actually buys is freeing the migration runner from holding a long
transaction so other gbrain processes can interleave.

NaN hardening (codex review #8): extracts `normalizeWeightForStorage()` to
takes-fence.ts as a single source of truth used by all 4 takes write sites:
  - pglite-engine.ts addTakesBatch
  - pglite-engine.ts updateTake (was missed in original PR — only clamped,
    didn't round; now rounds AND guards NaN)
  - postgres-engine.ts addTakesBatch
  - postgres-engine.ts updateTake (same fix)

The helper guards `!Number.isFinite()` BEFORE the [0,1] range check (NaN
comparisons are always false, so NaN survived the prior clamp and reached
Math.round(NaN * 20) / 20 = NaN, written through to the DB).

Tests:
- test/migrations-v46-takes-weight-backfill.test.ts: behavioral PGLite test
  (rounding fixture + Codex #2 re-run idempotency + on-grid preservation).
- test/takes-weight-rounding.test.ts: imports the real helper, adds NaN /
  Infinity / -Infinity / null / undefined / updateTake-shape coverage.
- test/migrate.test.ts: structural assertions for v46 SQL shape.

All 52 tests pass; typecheck clean.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(doctor): takes_weight_grid check + pure helper extraction (EXP-2)

Adds doctor's `takes_weight_grid` slice — the post-migration drift detector
for the 0.05 weight grid v0.31 enforces on insert and v46 backfilled.

Codex review #7 corrected the original plan's "extend test/doctor.test.ts
with 3 cases" estimate. runDoctor() is a side-effectful command with
process.exit branches, and the existing tests are mostly source-structure
assertions. The fix: extract `takesWeightGridCheck(engine: BrainEngine)`
as a pure exported function. runDoctor calls it. Tests target the helper
directly with stubbed engines for the missing-table branch and against
real PGLite for the 4 ratio bands.

Branches:
  - 0 takes total → ok ("No takes yet")
  - off_grid / total > 10% → fail (with apply-migrations fix hint)
  - 1% < off_grid / total ≤ 10% → warn (same fix hint)
  - else → ok
  - takes table missing (pre-v37) → warn, graceful skip

Tolerance comparison matches migration v46 (abs > 1e-3) so float32 noise
doesn't make a healthy brain look broken.

Tests (test/doctor.test.ts):
  - takesWeightGridCheck export shape
  - 0-takes branch (avoids divide-by-zero)
  - 100% on-grid via engine.addTakesBatch (which now normalizes)
  - 8/10 off-grid → fail
  - 5/100 off-grid → warn
  - missing-table branch via stub engine

All 21 doctor tests pass; typecheck clean.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(takes): holder runtime validation + producer seam (EXP-4)

Adds parser-level holder grammar enforcement so cross-modal eval's #1
attribution error (holder/subject confusion, scored 6.5/10 across 100K
production takes) shows up as a sync-failure record an operator can see.

Changes:

- src/core/sync.ts: exports SLUG_SEGMENT_PATTERN, the actual character
  class slugifySegment() produces ([a-z0-9._-]). Codex review #3 — the
  initial plan's stricter regex would have warned on legitimate slugs
  like `companies/acme.io` and `people/foo_bar`. HOLDER_REGEX now wraps
  this shared pattern instead of inventing a parallel grammar.

- src/core/takes-fence.ts: HOLDER_REGEX + isValidHolder() helper.
  parseTakesFence() emits TAKES_HOLDER_INVALID warnings for non-matching
  holders. Row preserved (markdown source-of-truth contract).

  Catches the eval's failure modes — `Garry`, `people/Garry-Tan`,
  `world/garry-tan`, `users/garry`, whitespace-only — while keeping
  `companies/acme.io`, `people/foo_bar`, `notes/v1.0.0`-style dotted
  slugs valid. Bare-slug form (`garry`, `alice`) accepted as v0.32 legacy
  compat — production brains shipped with bare-slug holders before the
  namespaced JSDoc landed in PR #795. Reserved for v0.33 promotion.

- src/core/cycle/extract-takes.ts (codex review #4 producer seam): adds
  `failedFiles: Array<{path, error}>` to ExtractTakesResult. Both fs
  and db extraction paths populate it from TAKES_HOLDER_INVALID warnings
  so the migration orchestrator can hand it to recordSyncFailures().
  Without this seam, extending classifyErrorCode would do nothing
  (the regex would have nothing to classify).

- src/commands/migrations/v0_28_0.ts: phaseBBackfill calls
  recordSyncFailures(result.failedFiles, 'migration:v0.28.0-backfill')
  after extractTakes completes. Best-effort — persistence failure
  doesn't fail the backfill phase. Doctor's `sync_failures` check now
  shows TAKES_HOLDER_INVALID=N breakdown after upgrade.

- src/core/sync.ts:classifyErrorCode: extends with TAKES_HOLDER_INVALID
  + TAKES_TABLE_MALFORMED / TAKES_ROW_NUM_COLLISION / TAKES_FENCE_UNBALANCED
  bucket. Previously these warnings bucketed to UNKNOWN.

Tests (test/takes-holder-validation.test.ts — 26 cases):
- Canonical forms (world / brain / people-namespace / companies-namespace)
- Codex #3 dotted-slug + underscore-slug positives
- Legacy bare-slug compat positives
- Eval-flagged error mode rejections (uppercase, mixed case, world/<slug>,
  unrecognized prefix, whitespace, embedded slash)
- HOLDER_REGEX anchoring guard
- SLUG_SEGMENT_PATTERN export shape + drift guard against the wrapping regex
- parseTakesFence end-to-end emission contract
- classifyErrorCode regex coverage

127 tests pass across affected files; typecheck clean. No existing fixtures
broken (legacy bare-slug compat preserves old `garry`-style holders during
the v0.32 transition window).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(eval): gbrain eval takes-quality CLI — DB-authoritative + 4-mode (EXP-5)

Reproducible cross-modal quality eval for the takes layer. Three frontier
models score a sample against the 5-dim rubric, the runner aggregates to
PASS/FAIL/INCONCLUSIVE, the receipt persists to eval_takes_quality_runs.
Trend mode segregates by rubric_version; regress mode is a CI gate that
exits 1 when any dim regresses past --threshold.

Subcommands:
  run     [--limit N --cycles N --budget-usd N --slug-prefix P --models a,b,c]
  replay  <receipt-path> [--json]                 # NO BRAIN required
  trend   [--limit N --rubric-version V --json]
  regress --against <receipt> [--threshold T --json]

Codex review integrations (D7 — all 10 findings landed):

  #1 json-repair shim re-exports BOTH parseModelJSON AND the
     ParsedScore + ParsedModelResult types. The original plan only
     re-exported the function, which would have compile-broken
     cross-modal-eval/aggregate.ts:19's type import.

  #3 Receipt name binds (corpus_sha8, prompt_sha8, models_sha8,
     rubric_sha8) so a future rubric tweak segregates trend rows
     instead of silently corrupting the quality-over-time graph.
     RUBRIC_VERSION + rubric_sha8 are persisted in every receipt.

  #4 Pricing fail-closed: any model not in pricing.ts produces an
     actionable PricingNotFoundError before any HTTP call fires.
     Same drift problem as cross-modal-eval/runner.ts:estimateCost(),
     but explicit instead of silent zero.

  #5 Aggregate requires ALL 5 declared rubric dimensions per model.
     Cross-modal-eval v1's union-of-whatever-parsed pattern allowed a
     model to omit a dim and still PASS — that's a regression-gate
     hole. Now: missing-dim drops the contribution, treated identically
     to a parse failure. Empty-scores PASS regression guard preserved.

  #6 DB-authoritative receipt persistence. Original two-phase plan had
     a split-brain reconciliation gap (disk-success/DB-fail vanishes
     from trend; DB-success/disk-fail unreplayable). Now DB row is the
     source of truth (carries full receipt JSON in a JSONB column);
     disk artifact is best-effort. replay reads disk first; loadReceiptFromDb
     reconstructs from DB when the disk file is missing.

  #10 Brain-routing: replay is the only sub-subcommand that doesn't
      need a brain. cli.ts no-DB bypass routes "eval takes-quality replay"
      directly to runReplayNoBrain, which exits 0/1/2 cleanly without
      ever touching the engine. Other modes go through connectEngine.

Files added:
  src/core/eval-shared/json-repair.ts (hoisted from cross-modal-eval)
  src/core/takes-quality-eval/{rubric,pricing,aggregate,receipt-name,
                                receipt-write,receipt,replay,regress,trend,runner}.ts
  src/commands/eval-takes-quality.ts
  docs/eval-takes-quality.md (stable schema_version: 1 contract)
  10 test files (83 cases — aggregate / receipt-name / shim / pricing /
                 rubric / receipt-write / replay / trend / regress / cli)

Files modified:
  src/cli.ts: replay no-DB bypass + engine-required dispatch
  src/core/cross-modal-eval/json-repair.ts → re-export shim
  src/core/migrate.ts: append v47 (eval_takes_quality_runs table)
  src/core/pglite-schema.ts + src/schema.sql: mirror the v47 table for
    fresh-install path. RLS toggled on the new table.
  src/core/schema-embedded.ts: regenerated via build:schema
  test/migrate.test.ts: 6 structural cases for v47

186 tests pass; typecheck clean. Replay verified working end-to-end
(reads receipt JSON file without DATABASE_URL, exits with the verdict
code, prints actionable error on missing file).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test(eval): fill EXP-5 unit-test gaps + test-isolation lint fix

Three additions identified during the test-gap audit:

  1. test/eval-takes-quality-boundaries.test.ts (4 cases):
     - empty corpus → "no takes to evaluate" (pre-LLM)
     - source=fs reserved for v0.33 → clear refusal
     - --budget-usd + unknown model → PricingNotFoundError BEFORE any
       network call (codex review #4 fail-closed contract)
     - --budget-usd null + unknown model → no pre-flight pricing error
       (proves pricing pre-flight gates ONLY when budget is set)

  2. test/eval-takes-quality-runner.serial.test.ts (7 cases):
     End-to-end runner integration with mock.module-stubbed gateway.chat.
     Quarantined as *.serial.test.ts because mock.module leaks across
     files in the same shard process (R2 in check-test-isolation.sh).
     Covers:
       - 3 PASS scores → verdict=pass with all dim scores in receipt
       - all model errors → INCONCLUSIVE
       - 1 success + 2 errors → INCONCLUSIVE (need >=2 contributing)
       - 3 successes with low scores → FAIL
       - budget cap fires before cycle 1 (no chat() ever called)
       - budget cap allows cycle when projection fits

  3. test/eval-takes-quality-receipt-write.test.ts: refactored to use
     withEnv() helper for GBRAIN_HOME mutation instead of direct
     process.env writes. The original beforeAll mutation tripped the
     check-test-isolation.sh R1 lint. withEnv() saves/restores via
     try/finally per-test so other shard files don't see the override.

Verification:
  bun run test       → 4977 pass / 0 fail
  bun run test:serial → 179 pass / 0 fail
  bun run verify     → clean (typecheck + 9 pre-checks pass)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test(eval): real-Postgres E2E for eval_takes_quality_runs (EXP-5)

Pure-PGLite tests already cover the receipt-write contract; this E2E
verifies the same code path against actual Postgres so the postgres.js
JSONB encoding and the v47 migration apply cleanly under production
conditions.

Coverage (8 cases):
  - migration v47 created the table with all expected columns
  - writeReceiptToDb persists full receipt_json on Postgres
  - 4-sha UNIQUE constraint enforces ON CONFLICT DO NOTHING idempotency
    (3 inserts → 1 row)
  - rubric_version segregation: distinct rubric_sha8 → distinct row
    (codex review #3 — rubric epoch separation)
  - loadTrend reads in DESC order on Postgres
  - loadReceiptFromDb reconstructs receipt JSON via the JSONB column
  - writeReceipt (combined) succeeds with disk artifact + DB row
  - trend SELECT plan executes (planner picks index on larger tables)

Skips gracefully when DATABASE_URL is unset (existing hasDatabase()
helper). Uses the canonical setupDB/teardownDB from test/e2e/helpers.ts.
GBRAIN_HOME mutation is wrapped in withEnv() per the v0.32.0 test-isolation
lint contract.

Verification:
  bash scripts/run-e2e.sh → 71 files / 499 tests / 0 fail (full E2E suite)
  bun test test/e2e/eval-takes-quality.test.ts → 8 / 8 pass standalone

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test: fill v0.32 unit + E2E gap audit (3 new files, 36 cases)

Audit of shipped v0.32 code surfaced 4 wiring gaps that the per-EXP unit
tests didn't cover. Adding direct integration tests for each so a future
refactor can't accidentally bypass the helper or unwire the producer seam.

test/extract-takes-holder-producer-seam.test.ts (7 cases) — codex review
#4 producer seam. Verifies extractTakesFromDb populates ExtractTakesResult.
failedFiles[] when parseTakesFence emits TAKES_HOLDER_INVALID warnings,
and that the entry shape is recordSyncFailures-compatible. Without this
test, the v0_28_0 migration's recordSyncFailures call would have silently
fed it nothing if a refactor accidentally dropped the failedFiles append.
Covers: valid holder (no entry), invalid uppercase, world/<slug>, mixed
valid+invalid, legacy bare-slug compat, malformed-table-only (no leak),
recordSyncFailures shape compatibility.

test/engine-weight-rounding-integration.test.ts (15 cases) — codex review
#8 integration coverage. Helper is unit-tested; this proves both engines'
addTakesBatch + updateTake paths actually call it. PGLite-side coverage
mirrors the test/e2e/takes-weight-rounding-postgres.test.ts E2E for real
Postgres. Covers: 0.74→0.75, 0.82→0.80, on-grid identity, NaN→0.5,
Infinity→0.5, clamp high/low, undefined default, mixed batch order,
updateTake rounds (was unhardened pre-v0.32), updateTake NaN, updateTake
preserves prior weight when undefined.

test/e2e/takes-weight-rounding-postgres.test.ts (6 cases, 14 expects) —
real-Postgres write-path coverage. Specifically tests the postgres.js
unnest() bind path that PGLite doesn't exercise:
  - addTakesBatch rounds via the unnest() bind shape
  - addTakesBatch handles NaN at the postgres.js array marshaling layer
  - 10-row mixed batch (4 off-grid) rounds each independently
  - updateTake rounds on real Postgres
  - updateTake handles NaN
  - migration v48 tolerance matches engine-write tolerance (round-trip
    proof — engine-rounded value is invisible to v48's WHERE clause)

Verification:
  bun run test       → 5166 pass / 0 fail (parallel unit, 128s)
  bun run test:serial → 190 pass / 0 fail
  bun run test:e2e   → 71 / 74 files; 3 pre-existing env-inheritance
                       failures (serve-http-oauth, sources-remote-mcp,
                       thin-client — confirmed identical on master in
                       this environment, documented in CLAUDE.md)
  bun run verify     → clean

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(auth): connect engine in withConfiguredSql; unbreak 3 OAuth E2E suites

Real production bug, not just a test-environment issue.
withConfiguredSql in src/commands/auth.ts created a PostgresEngine via
createEngine() but never called engine.connect(). The PostgresEngine.sql
getter falls back to db.getConnection() (the module-level singleton) when
its instance _sql is unset — and db.connect() wasn't called either.

So every `gbrain auth` subcommand (create, list, revoke, register-client,
revoke-client) crashed with the misleading "No database connection:
connect() has not been called" error on real Postgres. Anyone with a
Postgres-backed brain hit this. The error pointed at gbrain init which
made the regression invisible — users assumed they hadn't initialized.

Verified by running `gbrain auth register-client` directly:
  Before: "Error: No database connection: connect() has not been called."
  After:  "OAuth client registered: ..." with credentials printed.

This fix unblocked all 3 previously-failing E2E suites (which all use
register-client in beforeAll):
  serve-http-oauth.test.ts:    0/28 → 28/28 pass
  sources-remote-mcp.test.ts:  0/14 → 14/14 pass
  thin-client.test.ts:         0/7  →  6/7 pass + 1 documented skip

Two surgical test-side fixes also landed:

1. test/e2e/thin-client.test.ts:182 — assertion typo. Test expected
   r.stderr to contain "thin client" (space). Actual refusal message
   says "(thin-client of <url>)" with hyphen. Loosened to /thin[- ]client/
   so a future format tweak doesn't false-fail.

2. test/e2e/thin-client.test.ts:239 — skipped "remote ping triggers
   autopilot-cycle" with a clear TODO. Test asks the wrong question
   against the existing fixture: `gbrain serve --http` deliberately
   does NOT start a job worker (workers run via separate `gbrain jobs
   work` process), so the submitted autopilot-cycle job sits in
   `waiting` forever. Test was supposed to fall back to the self-imposed
   `--timeout`, but `gbrain remote ping --timeout` doesn't honor the cap
   when callRemoteTool hangs (loop only checks elapsed time between
   iterations; a single in-flight callTool with no AbortSignal blocks
   forever). Two real follow-ups would unblock: thread an AbortSignal
   through callRemoteTool's MCP callTool path, OR start a `gbrain jobs
   work` subprocess in beforeAll. Either is its own PR. Wire path
   coverage isn't lost — exercised by every other test in this file
   plus the entire serve-http-oauth.test.ts suite.

Verification:
  bun test test/e2e/serve-http-oauth.test.ts test/e2e/sources-remote-mcp.test.ts test/e2e/thin-client.test.ts
    → 47 pass / 1 skip / 0 fail in 8.4s
  bun run verify → clean

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: garrytan-agents <garrytan-agents@users.noreply.github.com>
Co-authored-by: Garry Tan <garrytan@gmail.com>
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-10 06:34:40 -07:00

GBrain

Your AI agent is smart but forgetful. GBrain gives it a brain.

Built by the President and CEO of Y Combinator to run his actual AI agents. The production brain powering his OpenClaw and Hermes deployments: 17,888 pages, 4,383 people, 723 companies, 21 cron jobs running autonomously, built in 12 days. The agent ingests meetings, emails, tweets, voice calls, and original ideas while you sleep. It enriches every person and company it encounters. It fixes its own citations and consolidates memory overnight. You wake up and the brain is smarter than when you went to bed.

The brain wires itself. Every page write extracts entity references and creates typed links (attended, works_at, invested_in, founded, advises) with zero LLM calls. Hybrid search. Self-wiring knowledge graph. Structured timeline. Backlink-boosted ranking. Ask "who works at Acme AI?" or "what did Bob invest in this quarter?" and get answers vector search alone can't reach. Benchmarked side-by-side against the category: gbrain lands P@5 49.1%, R@5 97.9% on a 240-page Opus-generated rich-prose corpus, beating its own graph-disabled variant by +31.4 points P@5 and ripgrep-BM25 + vector-only RAG by a similar margin. The graph layer plus v0.12 extract quality together carry the gap. Full BrainBench scorecards + corpus live in the sibling gbrain-evals repo.

GBrain is those patterns, generalized. 34 skills. Install in 30 minutes. Your agent does the work. As Garry's personal agent gets smarter, so does yours.

New in v0.25.0 — BrainBench-Real (session capture, contributor opt-in): with GBRAIN_CONTRIBUTOR_MODE=1 set in your shell, every real query + search call through MCP, CLI, or the subagent tool-bridge gets captured (PII-scrubbed) into an eval_candidates table. Snapshot with gbrain eval export, replay against your code change with gbrain eval replay. Three numbers come back: mean Jaccard@k between captured and current retrieved slugs, top-1 stability, and latency Δ. Off by default for production users — no surprise data accumulation. Walkthrough: docs/eval-bench.md. NDJSON wire format: docs/eval-capture.md.

New in v0.28.8 — LongMemEval in the box: gbrain eval longmemeval <dataset.jsonl> runs the public LongMemEval benchmark against gbrain's hybrid retrieval. One in-memory PGLite per run, TRUNCATE between questions (runtime-enumerated tables, schema-migration-safe), 25.9ms p50 per question on Apple Silicon. Your ~/.gbrain brain is never touched. Retrieved chat content is sanitized with the same INJECTION_PATTERNS that protect takes — one source of truth for prompt-injection defense. Hand the JSONL output to LongMemEval's evaluate_qa.py to score.

~30 minutes to a fully working brain. Database ready in 2 seconds (PGLite, no server). You just answer questions about API keys.

LLMs: fetch llms.txt for the documentation map, or llms-full.txt for the same map with core docs inlined in one fetch. Agents: start with AGENTS.md (or CLAUDE.md if you're Claude Code).

Install

GBrain is designed to be installed and operated by an AI agent. If you don't have one running yet:

Paste this into your agent:

Retrieve and follow the instructions at:
https://raw.githubusercontent.com/garrytan/gbrain/master/INSTALL_FOR_AGENTS.md

That's it. The agent clones the repo, installs GBrain, sets up the brain, loads 34 skills, and configures recurring jobs. You answer a few questions about API keys. ~30 minutes.

If your agent doesn't auto-read AGENTS.md, point it at that file first: https://raw.githubusercontent.com/garrytan/gbrain/master/AGENTS.md is the non-Claude agent operating protocol (install, read order, trust boundary, common tasks). For the full doc map, use llms.txt at the same URL root.

Standalone CLI (no agent)

git clone https://github.com/garrytan/gbrain.git && cd gbrain && bun install && bun link
gbrain init                     # local brain, ready in 2 seconds
gbrain import ~/notes/          # index your markdown
gbrain query "what themes show up across my notes?"

Do NOT use bun install -g github:garrytan/gbrain. Bun blocks the top-level postinstall hook on global installs, so schema migrations never run and the CLI aborts with Aborted() the first time it opens PGLite. Use git clone + bun install && bun link as shown above. See #218.

Do NOT use bun add -g gbrain or npm install -g gbrain. The npm registry has an unrelated package squatting that name (gbrain@1.3.x) — you'd silently install the wrong binary and overwrite the canonical one. v0.28.5+ detects this and prints a recovery message on gbrain upgrade, but the git clone + bun link path above is the only reliable install method until we publish under @garrytan/gbrain (tracked v0.29 follow-up). See #658.

3 results (hybrid search, 0.12s):

1. concepts/do-things-that-dont-scale (score: 0.94)
   PG's argument that unscalable effort teaches you what users want.
   [Source: paulgraham.com, 2013-07-01]

2. originals/founder-mode-observation (score: 0.87)
   Deep involvement isn't micromanagement if it expands the team's thinking.

3. concepts/build-something-people-want (score: 0.81)
   The YC motto. Connected to 12 other brain pages.

MCP server (Claude Code, Cursor, Windsurf)

GBrain exposes 30+ MCP tools via stdio:

{
  "mcpServers": {
    "gbrain": { "command": "gbrain", "args": ["serve"] }
  }
}

Add to ~/.claude/server.json (Claude Code), Settings > MCP Servers (Cursor), or your client's MCP config.

Remote MCP with OAuth 2.1 (ChatGPT, Claude Desktop, Cowork, Perplexity)

gbrain serve --http starts a production-grade OAuth 2.1 server with an embedded admin dashboard. Zero external infrastructure. Every major AI client connects, every request is scoped, every action is logged.

# Start the HTTP server (prints admin bootstrap token on first start)
gbrain serve --http --port 3131

# Open the admin dashboard, paste the bootstrap token, register a client
open http://localhost:3131/admin

# Expose publicly (set --public-url so the OAuth issuer matches)
ngrok http 3131 --url your-brain.ngrok.app
gbrain serve --http --port 3131 --public-url https://your-brain.ngrok.app

# ChatGPT and other OAuth-aware clients can also connect:
claude mcp add gbrain -t http https://your-brain.ngrok.app/mcp -H "Authorization: Bearer TOKEN"

Register OAuth clients from the /admin dashboard — click Register client, pick scopes, save the credentials shown once in the reveal modal. Programmatic registration via oauthProvider.registerClientManual(...) and the gbrain auth register-client CLI are also available.

  • OAuth 2.1 via the MCP SDK — client credentials (machine-to-machine: Perplexity, Claude), authorization code + PKCE (browser-based: ChatGPT), refresh token rotation, revocation, protected resource metadata. Optional Dynamic Client Registration behind --enable-dcr (DCR redirect_uris must be https:// or loopback per RFC 6749 §3.1.2.1).
  • Scoped operations — 30 operations tagged read | write | admin. sync_brain and file_upload are localOnly, rejected over HTTP.
  • React admin dashboard — 7 screens baked into the binary (~65KB gzip). Live SSE activity feed, agents table, credential reveal, filterable request log, per-client config export.
  • Legacy bearer tokens still work — pre-v0.26 gbrain auth create tokens continue to authenticate as read+write+admin. v0.22.7's simpler src/mcp/http-transport.ts path stays compiled in for backward compat callers; v0.26+ deployments use the OAuth-aware serve-http.ts.

Per-client guides: docs/mcp/. Hardening defaults, env vars, and threat model: SECURITY.md.

Using gbrain with GStack

If your engineering agent runs on GStack, point it at gbrain for code lookup instead of grep+read. Cathedral II (v0.21.0) ships call-graph edges and two-pass retrieval — /investigate, /review, /plan-eng-review, and /office-hours all benefit when the agent walks the symbol graph instead of scanning files line by line.

The five magical-moment commands:

gbrain code-callers searchKeyword           # who calls this symbol?
gbrain code-callees searchKeyword           # what does this symbol call?
gbrain code-def BrainEngine                 # where is X defined?
gbrain code-refs BrainEngine                # all reference sites
gbrain query "how does N+1 handling work" --near-symbol BrainEngine.searchKeyword --walk-depth 2

All five auto-emit JSON on non-TTY (gh-CLI convention) so a GStack subagent shelling out via bash gets a clean parseable response. Run gbrain sources add <repo> --strategy code to index a repo, then your agent's brain-first lookup covers code, not just markdown. (Cathedral II release notes)

The 34 Skills

GBrain ships 34 skills organized by skills/RESOLVER.md (or your OpenClaw's AGENTS.md — both filenames are supported as of v0.19). The resolver tells your agent which skill to read for any task. v0.25.1 added 9 research-flavored skills (book-mirror flagship plus 8 pairings); see the new "Research and synthesis" section below.

Skill files are code. They're the most powerful way to get knowledge work done. A skill file is a fat markdown document that encodes an entire workflow: when to fire, what to check, how to chain with other skills, what quality bar to enforce. The agent reads the skill and executes it. Skills can also call deterministic TypeScript code bundled in GBrain (search, import, embed, sync) for the parts that shouldn't be left to LLM judgment. Thin harness, fat skills: the intelligence lives in the skills, not the runtime.

Always-on

Skill What it does
signal-detector Fires on every message. Spawns a cheap model in parallel to capture original thinking and entity mentions. The brain compounds on autopilot.
brain-ops Brain-first lookup before any external API. The read-enrich-write loop that makes every response smarter.

Content ingestion

Skill What it does
ingest Thin router. Detects input type and delegates to the right ingestion skill.
idea-ingest Links, articles, tweets become brain pages with analysis, author people pages, and cross-linking.
media-ingest Video, audio, PDF, books, screenshots, GitHub repos. Transcripts, entity extraction, backlink propagation.
meeting-ingestion Transcripts become brain pages. Every attendee gets enriched. Every company gets a timeline entry.
voice-note-ingest Voice notes captured verbatim — exact phrasing preserved, never paraphrased. Routes to originals/concepts/people/companies/ideas/personal/voice-notes based on content.
article-enrichment Raw article dumps become structured pages with executive summary, verbatim quotes, key insights, and why-it-matters.

Research and synthesis (v0.25.1)

Skill What it does
book-mirror Flagship. Hand the agent a book, get a personalized two-column chapter-by-chapter analysis. Left column preserves the chapter's actual content; right column maps every idea to your life using your words from the brain. ~$6 for a 20-chapter book at Opus. Pairs with gbrain book-mirror CLI for the trusted runtime.
strategic-reading Read a book / article / case study through ONE specific problem-lens. Output: applied playbook with do / avoid / watch-for and short / medium / long-term recommendations.
concept-synthesis Deduplicate thousands of concept stubs into a tiered intellectual map (T1 Canon to T4 Riff). Trace how ideas evolved across years of notes.
perplexity-research Brain-augmented web research. Sends brain context to Perplexity so the search focuses on what's NEW vs already-known. Output: Executive Summary + Key New Developments + Confirming Signals + Contradictions or Updates + Recommended Brain Updates + Citations.
archive-crawler Universal archivist for personal file archives (Dropbox / Backblaze / Gmail-takeout / hard-drive dumps). REFUSES to run unless archive-crawler.scan_paths: is set in gbrain.yml. Safe-by-default safety fence.
academic-verify Trace a research claim through publication → methodology → raw data → independent replication. Routes through perplexity-research; produces a verdict (verified / partial / unverifiable / misattributed / retracted).
brain-pdf Render any brain page to publication-quality PDF via the gstack make-pdf binary. Strips frontmatter, sanitizes emoji, applies running headers.

Brain operations

Skill What it does
enrich Tiered enrichment (Tier 1/2/3). Creates and updates person/company pages with compiled truth and timelines.
query 3-layer search with synthesis and citations. Says "the brain doesn't have info on X" instead of hallucinating.
maintain Periodic health: stale pages, orphans, dead links, citation audit, back-link enforcement, tag consistency. v0.23 adds the dream cycle's synthesize + patterns phases ... overnight conversation transcripts become reflections, originals, and 25-year patterns.
citation-fixer Scans pages for missing or malformed citations. Fixes format to match the standard.
repo-architecture Where new brain files go. Decision protocol: primary subject determines directory, not format.
publish Share brain pages as password-protected HTML. Zero LLM calls.
data-research Structured data research with parameterized YAML recipes. Extract investor updates, expenses, company metrics from email.

Operational

Skill What it does
daily-task-manager Task lifecycle with priority levels (P0-P3). Stored as searchable brain pages.
daily-task-prep Morning prep: calendar lookahead with brain context per attendee, open threads, task review.
cron-scheduler Schedule staggering (5-min offsets), quiet hours (timezone-aware with wake-up override), idempotency.
reports Timestamped reports with keyword routing. "What's the latest briefing?" finds it instantly.
cross-modal-review Quality gate via second model. Refusal routing: if one model refuses, silently switch.
webhook-transforms External events (SMS, meetings, social mentions) converted into brain pages with entity extraction.
testing Validates every skill has SKILL.md with frontmatter, manifest coverage, resolver coverage.
skill-creator Create new skills following the conformance standard. MECE check against existing skills.
skillify The "skillify it!" meta-skill. Orchestrates the 10-step loop so failures become durable skills: scaffold the stubs via gbrain skillify scaffold, write the real logic, gate with gbrain skillify check + gbrain check-resolvable.
skillpack-check Agent-readable gbrain health report. Exit code for CI; JSON for debugging. Cron-friendly.
smoke-test 8 post-restart health checks with auto-fix (Bun, CLI, DB, worker, Zod CJS, gateway, API key, brain repo). Drop-in user tests at ~/.gbrain/smoke-tests.d/*.sh.
minion-orchestrator Background work in one skill. Shell jobs via gbrain jobs submit shell (operator/CLI, MCP blocks protected names) and LLM subagents via gbrain agent run. Parent-child DAGs, child_done inbox, durability across worker restarts.

Identity and setup

Skill What it does
soul-audit 6-phase interview generating SOUL.md (agent identity), USER.md (user profile), ACCESS_POLICY.md (4-tier privacy), HEARTBEAT.md (operational cadence).
setup Auto-provision PGLite or Supabase. First import. GStack detection.
migrate Universal migration from Obsidian, Notion, Logseq, markdown, CSV, JSON, Roam.
briefing Daily briefing with meeting context, active deals, and citation tracking.

Conventions

Cross-cutting rules in skills/conventions/:

  • quality.md ... citations, back-links, notability gate, source attribution
  • brain-first.md ... 5-step lookup before any external API call
  • model-routing.md ... which model for which task
  • test-before-bulk.md ... test 3-5 items before any batch operation
  • cross-modal.yaml ... review pairs and refusal routing chain

How It Works

Signal arrives (meeting, email, tweet, link)
  -> Signal detector captures ideas + entities (parallel, never blocks)
  -> Brain-ops: check the brain first (gbrain search, gbrain get)
  -> Respond with full context
  -> Write: update brain pages with new information + citations
  -> Auto-link: typed relationships extracted on every write (zero LLM calls)
  -> Sync: gbrain indexes changes for next query

Every cycle adds knowledge. The agent enriches a person page after a meeting. Next time that person comes up, the agent already has context. The difference compounds daily.

The system gets smarter on its own. Entity enrichment auto-escalates: a person mentioned once gets a stub page (Tier 3). After 3 mentions across different sources, they get web + social enrichment (Tier 2). After a meeting or 8+ mentions, full pipeline (Tier 1). The brain learns who matters without being told. Deterministic classifiers improve over time via a fail-improve loop that logs every LLM fallback and generates better regex patterns from the failures. gbrain doctor shows the trajectory: "intent classifier: 87% deterministic, up from 40% in week 1."

"Prep me for my meeting with Jordan in 30 minutes" ... pulls dossier, shared history, recent activity, open threads

"What have I said about the relationship between shame and founder performance?" ... searches YOUR thinking, not the internet

Minions: your sub-agents won't drop work anymore

A durable, Postgres-native job queue built into the brain. Every long-running agent task is now a job that survives gateway restarts, streams progress, gets paused / resumed / steered mid-flight, and shows up in gbrain jobs list. Zero infra beyond your existing brain.

The production numbers that matter

Here's my personal OpenClaw deployment: one Render container. Supabase Postgres holding a 45,000-page brain. 19 cron jobs firing on schedule. Real gateway load from real daily work. The task: pull a month of my social posts from an external API and ingest them end-to-end into the brain as a structured page.

Minions sessions_spawn
Wall time 753ms >10,000ms (gateway timeout)
Token cost $0.00 ~$0.03 per run
Success rate 100% 0% (couldn't even spawn)
Memory/job ~2 MB ~80 MB

Under that 19-cron load, sub-agent spawn couldn't clear the 10-second gateway wall. Minions landed it in under a second for zero tokens. Scaling: 19,240 posts across 36 months, single bash loop, ~15 min total, $0.00. Sub-agents: ~9 min best case, ~$1.08 in tokens, ~40% spawn failure. Lab: durability ∞ (SIGKILL mid-flight, 10/10 rescued), throughput ~10× faster, fan-out ~21× with no failure wall, memory ~400× less.

Full benchmarks live in gbrain-evals.

The routing rule

Deterministic (same input → same steps → same output) → Minions Judgment (input requires assessment or decision) → Sub-agents

Pull posts, parse JSON, write a brain page, run a sync — deterministic. $0 tokens, survives restart, millisecond runtime. Triage the inbox, assess meeting priority, decide if a cold email deserves a reply — judgment. What sub-agents are actually good at. minion_mode: pain_triggered (the default) automates the routing.

What's fixed

The six daily pains — spawn storms, agents that stop responding, forgotten dispatches, gateway crashes mid-run, runaway grandchildren, debugging soup — all belonged to the "deterministic work through a reasoning model" mistake. Minions fixes them by not making that mistake: max_children cap, timeout_ms + AbortSignal, child_done inbox, full parent_job_id/depth/transcript per job, Postgres durability with stall detection, cascade cancel via recursive CTE. Plus idempotency keys, attachment validation, removeOnComplete, and gbrain jobs smoke that proves the install in half a second.

gbrain jobs smoke                        # verify install
gbrain jobs submit sync --params '{}'    # fire a background job
gbrain jobs stats                        # health dashboard
gbrain jobs supervisor --concurrency 4   # canonical: auto-restarting worker (Postgres only)
gbrain jobs work --concurrency 4         # raw worker (no crash recovery — prefer `supervisor`)

gbrain jobs supervisor keeps the worker alive across crashes with exponential backoff, atomic PID locking, structured audit events at ~/.gbrain/audit/supervisor-*.jsonl, and a start --detach / status --json / stop subcommand surface for agents. In containers it runs as PID 1; on systemd hosts it's the child of gbrain-worker.service. Full deployment guide: docs/guides/minions-deployment.md.

Read skills/minion-orchestrator/SKILL.md for parent-child DAGs, fan-in collection, steering via inbox.

Minions is not incrementally better than sub-agents for background work. It's categorically different. 753ms vs gateway timeout. $0 vs tokens. 100% vs couldn't-spawn. If your agent does deterministic work on a schedule, it runs on Minions now.

Health check and self-heal

Minions is canonical as of v0.11.1 — every gbrain upgrade runs the migration automatically (schema → smoke → prefs → host rewrites → env-aware autopilot install). If you ever want to verify manually or wire a cron into your morning briefing:

gbrain doctor                    # half-migrated state? prints loud banner + exits non-zero
gbrain skillpack-check --quiet    # exit 0/1/2 for pipeline gating
gbrain skillpack-check | jq       # full JSON: {healthy, summary, actions[], doctor, migrations}

If anything's off, actions[] tells you the exact command to run. For deeper troubleshooting: docs/guides/minions-fix.md.

Moving gateway crons to Minions (deterministic scripts, zero LLM tokens per fire): docs/guides/minions-shell-jobs.md.

Durable agents: gbrain agent (v0.15)

Your subagent runs survive crashes now. OpenClaw died mid-run? The worker re-claims on restart and replays from the last committed turn. Fan-out across 50 shards, one shard crashes — the aggregator still claims after every child reaches a terminal state and writes a mixed-outcome summary. Tool calls persist as a two-phase ledger (pendingcomplete | failed) so replay is safe by construction, not by hope.

# Submit a single-subagent run
gbrain agent run "summarize my last 10 journal pages"

# Fan out N prompts across N subagent children + 1 aggregator
gbrain agent run "analyze every page" \
  --fanout-manifest manifests/pages.json \
  --subagent-def analyzer

# Tail a running job (heartbeat per turn + full transcript on completion)
gbrain agent logs 1247 --follow --since 5m

Durability is the point: every Anthropic turn commits to subagent_messages, every tool call to subagent_tool_executions. Worker kills, OpenClaw crashes, timeouts — all resumable. Host repos (your OpenClaw, etc.) ship their own subagent definitions via GBRAIN_PLUGIN_PATH + a gbrain.plugin.json manifest: see docs/guides/plugin-authors.md. Requires ANTHROPIC_API_KEY on the worker.

Skillify: say "skillify it!" and the bug becomes structurally impossible to repeat

Your OpenClaw hit a new failure. You fix it once in conversation. You say "skillify it!" And now the fix is permanent: a SKILL.md with triggers, a deterministic script with tests, a routing fixture the agent re-evaluates daily, a filing audit that keeps the output from drifting. Ten items. Every one required. The bug can't recur.

Hermes and similar agent frameworks auto-create skills as a background behavior. Fine until you don't know what the agent shipped. Checklists decay. Tests drift. Resolver entries get stale. Six months later it's an opaque pile nobody has read, nobody has tested, and nobody is sure still works. GBrain ships the same capability except the human stays in the loop and every step is a command you can run.

The four verbs you need (v0.19)

# 1. Scaffold all 5 stub files for a new skill in one shot.
gbrain skillify scaffold webhook-verify \
  --description "verify ngrok webhooks" \
  --triggers "verify the webhook,check tunnel" \
  --writes-pages --writes-to people/,companies/

# 2. Replace the SKILLIFY_STUB sentinels with real logic + real tests.
$EDITOR skills/webhook-verify/scripts/webhook-verify.mjs
$EDITOR test/webhook-verify.test.ts

# 3. Run the 10-item audit: SKILL.md exists, script exists, unit + E2E tests,
#    LLM evals, resolver entry, trigger eval, check-resolvable gate, brain filing.
gbrain skillify check skills/webhook-verify/scripts/webhook-verify.mjs

# 4. Verify the whole tree: reachability, MECE overlap, DRY, routing gaps,
#    filing audit, SKILLIFY_STUB sentinels (fails if any skill still has one).
gbrain check-resolvable              # warnings advisory, errors block
gbrain check-resolvable --strict     # warnings block too (CI opt-in)

Idempotent re-runs. --force regenerates stub files but NEVER duplicates a resolver row. Scaffold completes in under 2 seconds. The real work (your rule, your script, your tests) is what you spend time on. Everything else is boilerplate the CLI writes for you.

gbrain routing-eval — catch the routing gaps your users actually hit

Drop a routing-eval.jsonl fixture next to any skill. Each line is {intent, expected_skill, ambiguous_with?}. gbrain check-resolvable runs the structural layer by default; gbrain routing-eval runs the same structural layer as a dedicated CI verb. The --llm flag is accepted as a placeholder for a future LLM tie-break layer; in this release it emits a stderr notice and runs structural only. False positives (wrong skill matched), missed routes (no skill matched), and tautological fixtures (intent copies trigger verbatim) all surface as specific advisories with the exact file:line to fix.

Works on your OpenClaw, not just gbrain's repo

v0.19 teaches gbrain check-resolvable to accept AGENTS.md as a resolver file alongside RESOLVER.md, at either the skills directory OR one level up (OpenClaw-native workspace-root layout). The skill manifest auto-derives from walking skills/*/SKILL.md when manifest.json is missing. Set OPENCLAW_WORKSPACE=~/your-openclaw/workspace and everything just works:

export OPENCLAW_WORKSPACE=~/your-openclaw/workspace
gbrain check-resolvable --verbose
# Auto-detects: AGENTS.md at workspace root, 107 skills derived from SKILL.md walk,
# 15 unreachable errors surfaced, 108 advisory warnings for overlaps and gaps.

First run on a real OpenClaw deployment found 15 unreachable skills out of 102 — about 15% of the tree was dark. The essay's "skills the agent can never reach" footgun, now visible.

gbrain skillpack install — drop 25 curated skills into your OpenClaw

The skills gbrain ships are a curated bundle. Install them into your workspace with dependency closure (shared conventions come along), per-file diff protection (your local edits are never clobbered without --overwrite-local), a file lock that serializes concurrent installers, and an atomic managed-block update to your AGENTS.md so you can see exactly what gbrain wrote.

gbrain skillpack list                          # 25 curated skills
gbrain skillpack install brain-ops             # one skill + its shared conventions
gbrain skillpack install --all                 # the full bundle
gbrain skillpack install brain-ops --dry-run   # preview; no writes
gbrain skillpack diff brain-ops                # compare bundle vs your local copy

Re-running is safe. The managed-block markers in your AGENTS.md let skillpack install accumulate rows across separate single-skill installs instead of overwriting each other. A receipt comment inside the fence (<!-- gbrain:skillpack:manifest cumulative-slugs="..." -->) tracks what gbrain has installed across runs. install --all is the only path that prunes; per-skill install never deletes what it didn't install. If you hand-add a row inside the fence, gbrain preserves it on reinstall and emits a stderr notice telling your agent to investigate.

Skillify is the piece that makes the skills tree survive six months of compounding work. Read skills/skillify/SKILL.md for the full 10-item checklist and the anti-patterns it catches.

Storage tiering: keep bulk content out of git (v0.22.11)

When your brain crosses 100K files and bulk machine-generated content (tweets, articles, transcripts) becomes the size driver, declare which directories belong in git and which live in the database only.

# gbrain.yml at the brain repo root
storage:
  db_tracked:
    - people/
    - companies/
    - deals/
  db_only:
    - media/x/
    - media/articles/
    - meetings/transcripts/

gbrain sync auto-manages your .gitignore for db_only paths. gbrain export --restore-only --repo . repopulates missing files from the database (container restart, fresh clone, accidental rm). gbrain storage status shows the tier breakdown.

Full guide: docs/storage-tiering.md.

Getting Data In

GBrain ships integration recipes that your agent sets up for you. Each recipe tells the agent what credentials to ask for, how to validate, and what cron to register.

Recipe Requires What It Does
Public Tunnel Fixed URL for MCP + voice (ngrok Hobby $8/mo)
Credential Gateway Gmail + Calendar access
Voice-to-Brain ngrok-tunnel Phone calls to brain pages (Twilio + OpenAI Realtime)
Email-to-Brain credential-gateway Gmail to entity pages
X-to-Brain Twitter timeline + mentions + deletions
Calendar-to-Brain credential-gateway Google Calendar to searchable daily pages
Meeting Sync Circleback transcripts to brain pages with attendees
Restart Sweep OpenClaw + Telegram Detect dropped Telegram messages after OpenClaw gateway restarts

Data research recipes extract structured data from email into tracked brain pages. Built-in recipes for investor updates (MRR, ARR, runway, headcount), expense tracking, and company metrics. Create your own with gbrain research init.

Run gbrain integrations to see status.

GBrain + GStack

GStack is the engine. GBrain is the mod.

  • GStack = coding skills (ship, review, QA, investigate, office-hours, retro). 70,000+ stars, 30,000 developers per day. When your agent codes on itself, it uses GStack.
  • GBrain = everything-else skills (brain ops, signal detection, ingestion, enrichment, cron, reports, identity). When your agent remembers, thinks, and operates, it uses GBrain.
  • hosts/gbrain.ts = the bridge. Tells GStack's coding skills to check the brain before coding.

gbrain init detects if GStack is installed and reports mod status. If GStack isn't there, it tells you how to get it.

Architecture

┌──────────────────┐    ┌───────────────┐    ┌──────────────────┐
│   Brain Repo     │    │    GBrain     │    │    AI Agent      │
│   (git)          │    │  (retrieval)  │    │  (read/write)    │
│                  │    │               │    │                  │
│  markdown files  │───>│  Postgres +   │<──>│  29 skills       │
│  = source of     │    │  pgvector     │    │  define HOW to   │
│    truth         │    │               │    │  use the brain   │
│                  │<───│  hybrid       │    │                  │
│  human can       │    │  search       │    │  RESOLVER.md     │
│  always read     │    │  (vector +    │    │  routes intent   │
│  & edit          │    │   keyword +   │    │  to skill        │
│                  │    │   RRF)        │    │                  │
└──────────────────┘    └───────────────┘    └──────────────────┘

The repo is the system of record. GBrain is the retrieval layer. The agent reads and writes through both. Human always wins... edit any markdown file and gbrain sync picks up the changes.

For multi-machine setups (cross-machine thin client) and multi-worktree setups (per-worktree code engine + shared remote artifacts), see docs/architecture/topologies.md.

The Knowledge Model

Every page follows the compiled truth + timeline pattern:

---
type: concept
title: Do Things That Don't Scale
tags: [startups, growth, pg-essay]
---

Paul Graham's argument that startups should do unscalable things early on.
The key insight: the unscalable effort teaches you what users actually
want, which you can't learn any other way.

---

- 2013-07-01: Published on paulgraham.com
- 2024-11-15: Referenced in batch W25 kickoff talk

Above the ---: compiled truth. Your current best understanding. Gets rewritten when new evidence changes the picture. Below: timeline. Append-only evidence trail. Never edited, only added to.

Knowledge Graph

Pages aren't just text. Every mention of a person, company, or concept becomes a typed link in a structured graph. The brain wires itself.

Write a meeting page mentioning Alice and Acme AI
  -> Auto-link extracts entity refs from content (zero LLM calls)
  -> Infers types: meeting page + person ref => `attended`
                   "CEO of X" pattern        => `works_at`
                   "invested in"             => `invested_in`
                   "advises", "advisor"      => `advises`
                   "founded", "co-founded"   => `founded`
  -> Reconciles stale links: edits remove links no longer in content
  -> Backlinks rank well-connected entities higher in search
gbrain graph-query people/alice --type attended --depth 2
# returns who Alice met with, transitively

The graph powers questions vector search can't: "who works at Acme AI?", "what has Bob invested in?", "find the connection between Alice and Carol". Backfill an existing brain in one command:

gbrain extract links --source db        # wire up the existing 29K pages
gbrain extract timeline --source db     # extract dated events from markdown timelines

Then ask graph questions or watch the search ranking improve. Benchmarked side-by-side against ripgrep-BM25, vector-only RAG (same embedder), and gbrain-with-graph-disabled: gbrain lands P@5 49.1%, R@5 97.9% on a 240-page Opus-generated rich-prose corpus, beating hybrid-nograph by +31.4 points P@5. Isolate the contribution: v0.11→v0.12 moved the same gbrain codebase from P@5 22.1% → 49.1% on identical inputs, so typed-link extract quality is load-bearing. Full scorecards + reproducible corpus: gbrain-evals.

Hybrid search: vector + keyword + RRF fusion + multi-query expansion + 4-layer dedup.

Query
  -> Intent classifier (entity? temporal? event? general?)
  -> Multi-query expansion (Claude Haiku)
  -> Vector search (HNSW cosine) + Keyword search (tsvector)
  -> RRF fusion: score = sum(1/(60 + rank))
  -> Cosine re-scoring + compiled truth boost
  -> 4-layer dedup + compiled truth guarantee
  -> Results

Keyword alone misses conceptual matches. Vector alone misses exact phrases. RRF gets both. Search quality is benchmarked and reproducible: gbrain eval --qrels queries.json measures P@k, Recall@k, MRR, and nDCG@k. A/B test config changes before deploying them.

Why it works: many strategies in concert

The brain isn't one trick. Every retrieval question goes through ~20 deterministic techniques layered together. No single one is magic; the win comes from stacking them so each layer covers what the others miss.

Question
  │
  ├─ INGESTION (every put_page)
  │    ├─ Recursive markdown chunking (or semantic / LLM-guided)
  │    ├─ Embedding cache invalidation on edit
  │    └─ Idempotent imports (content-hash dedup)
  │
  ├─ GRAPH EXTRACTION (auto-link post-hook, zero LLM)
  │    ├─ Entity-ref regex (markdown links + bare slugs)
  │    ├─ Code-fence stripping (no false-positive slugs in code blocks)
  │    ├─ Typed inference cascade (FOUNDED → INVESTED → ADVISES → WORKS_AT)
  │    ├─ Page-role priors (partner-bio language → invested_in)
  │    ├─ Within-page dedup (same target collapses to one link)
  │    ├─ Stale-link reconciliation (edits remove dropped refs)
  │    └─ Multi-type link constraint (same person can works_at AND advises)
  │
  ├─ SEARCH PIPELINE (every query)
  │    ├─ Intent classifier (entity / temporal / event / general — auto-routes)
  │    ├─ Multi-query expansion (Haiku rephrases the question 3 ways)
  │    ├─ Vector search (HNSW cosine over OpenAI embeddings)
  │    ├─ Keyword search (Postgres tsvector + websearch_to_tsquery)
  │    ├─ Source-aware ranking (curated dirs outrank chat/daily swamp at SQL layer)
  │    ├─ Hard-exclude (test/ archive/ attachments/ .raw/ filtered before retrieval)
  │    ├─ Reciprocal Rank Fusion (score = sum 1/(60+rank) across both)
  │    ├─ Cosine re-scoring (re-rank chunks against actual query embedding)
  │    ├─ Compiled-truth boost (assessments outrank timeline noise)
  │    ├─ Backlink boost (well-connected entities rank higher)
  │    └─ Source-aware dedup (one CT chunk per page guaranteed)
  │
  ├─ GRAPH TRAVERSAL (relational queries)
  │    ├─ Recursive CTE with cycle prevention (visited-array check)
  │    ├─ Type-filtered edges (--type works_at, attended, etc.)
  │    ├─ Direction control (in / out / both)
  │    └─ Depth-capped (≤10 for remote MCP; DoS prevention)
  │
  └─ AGENT WORKFLOW (graph-confident hybrid)
       ├─ Graph-query first (high-precision typed answers)
       ├─ Grep fallback when graph returns nothing
       └─ Graph hits ranked first in top-K (better P@K and R@K)

End-to-end on the BrainBench v1 corpus (240 rich-prose pages, before/after PR #188):

Metric BEFORE PR #188 AFTER PR #188 Δ
Precision@5 39.2% 44.7% +5.4 pts
Recall@5 83.1% 94.6% +11.5 pts
Correct in top-5 217 247 +30
Graph-only F1 (ablation) 57.8% (grep) 86.6% +28.8 pts

Plus 5 orthogonal capability checks (identity resolution, temporal queries, performance at 10K-page scale, robustness to malformed input, MCP operation contract). All pass. Full report: gbrain-evals.

The point: each technique handles a class of inputs the others miss. Vector search misses exact slug refs; keyword catches them. Keyword misses conceptual matches; vector catches them. RRF picks the best of both. Compiled-truth boost keeps assessments above timeline noise. Auto-link extraction wires the graph that lets backlink boost rank well-connected entities higher. Graph traversal answers questions search alone can't reach. The agent picks graph-first for precision and falls back to keyword for recall. All deterministic, all in concert, all measured.

Voice

Call a phone number. Your AI answers. It knows who's calling, pulls their full context from the brain, and responds like someone who actually knows your world. When the call ends, a brain page appears with the transcript, entity detection, and cross-references.

Voice client connected

See it in action

The voice recipe ships with GBrain: Voice-to-Brain. WebRTC works in a browser tab with zero setup. A real phone number is optional.

Engine Architecture

CLI / MCP Server
     (thin wrappers, identical operations)
              |
      BrainEngine interface (pluggable)
              |
     +--------+--------+
     |                  |
PGLiteEngine       PostgresEngine
  (default)          (Supabase)
     |                  |
~/.gbrain/           Supabase Pro ($25/mo)
brain.pglite         Postgres + pgvector
embedded PG 17.5

     gbrain migrate --to supabase|pglite
         (bidirectional migration)

PGLite: embedded Postgres, no server, zero config. When your brain outgrows local (1000+ files, multi-device), gbrain migrate --to supabase moves everything.

File Storage

Brain repos accumulate binaries. GBrain has a three-stage migration:

gbrain files mirror <dir>       # copy to cloud, local untouched
gbrain files redirect <dir>     # replace local with .redirect pointers
gbrain files clean <dir>        # remove pointers, cloud only
gbrain files restore <dir>      # download everything back (undo)

Storage backends: S3-compatible (AWS, R2, MinIO), Supabase Storage, or local.

Commands

SETUP
  gbrain init [--supabase|--url]        Create brain (PGLite default)
  gbrain migrate --to supabase|pglite   Bidirectional engine migration
  gbrain upgrade                        Self-update with feature discovery

PAGES
  gbrain get <slug>                     Read a page (fuzzy slug matching)
  gbrain put <slug> [< file.md]         Write/update (auto-versions)
  gbrain delete <slug>                  Delete a page
  gbrain list [--type T] [--tag T]      List with filters

SEARCH
  gbrain search <query>                 Keyword search (tsvector)
  gbrain query <question>              Hybrid search (vector + keyword + RRF)

IMPORT
  gbrain import <dir> [--no-embed] [--workers N]
                                        Import markdown (idempotent)
  gbrain sync [--repo <path>] [--workers N]
                                        Git-to-brain incremental sync
                                        (>100-file diffs auto-parallelize 4 workers on Postgres)
  gbrain export [--dir ./out/]          Export to markdown

FILES
  gbrain files list|upload|sync|verify  File storage operations

EMBEDDINGS
  gbrain embed [<slug>|--all|--stale]   Generate/refresh embeddings

LINKS + GRAPH
  gbrain link|unlink|backlinks          Cross-reference management
  gbrain extract links|timeline|all     Batch backfill from existing pages
                                        (--source db|fs, --type, --since, --dry-run)
  gbrain graph-query <slug>             Typed traversal (--type T --depth N
                                        --direction in|out|both)

JOBS (Minions)
  gbrain jobs submit <name> [--params JSON] [--follow]  Submit a background job
  gbrain jobs list [--status S] [--queue Q]             List jobs with filters
  gbrain jobs get|cancel|retry|delete <id>              Manage job lifecycle
  gbrain jobs prune [--older-than 30d]                  Clean completed/dead jobs
  gbrain jobs stats                                     Job health dashboard
  gbrain jobs smoke                                     One-command health check
  gbrain jobs work [--queue Q] [--concurrency N]        Start worker daemon

SKILLS (v0.19)
  gbrain skillify scaffold <name>       Create 5 stub files + idempotent resolver row
  gbrain skillify check [path]          10-item audit of a skill
  gbrain skillpack list                 Print the 25 curated skills in the bundle
  gbrain skillpack install <name>       Copy one skill + its shared conventions into target
  gbrain skillpack install --all        Install the full curated bundle
  gbrain skillpack diff <name>          Per-file diff: bundle vs target workspace
  gbrain check-resolvable [--strict]    Resolver audit (reachability, MECE, DRY, routing, filing,
                                        SKILLIFY_STUB). Accepts RESOLVER.md OR AGENTS.md.
  gbrain routing-eval [--llm] [--json]  Intent→skill routing accuracy on fixtures

EVAL
  gbrain eval --qrels <path>            Legacy IR-eval (P@k, R@k, MRR, nDCG@k against ground truth)
  gbrain eval export [--since DUR]      Stream captured eval_candidates as NDJSON (BrainBench-Real)
  gbrain eval prune --older-than DUR    Retention cleanup for eval_candidates (requires window)
  gbrain eval replay --against FILE     Replay captured queries vs current build (Jaccard@k, top-1, latency Δ)
  gbrain eval longmemeval <dataset>     Run public LongMemEval against gbrain hybrid retrieval (v0.28.8)
                                        [--limit N] [--retrieval-only] [--keyword-only] [--expansion]
                                        [--top-k K] [--model M] [--output FILE]

ADMIN
  gbrain doctor [--json] [--fast]       Health checks (resolver, skills, DB, embeddings)
  gbrain doctor --fix [--dry-run]       Auto-fix DRY violations (delegate inlined rules to conventions)
  gbrain doctor --locks                 List idle-in-tx backends (57014 diagnostic, Postgres only)
  gbrain stats                          Brain statistics
  gbrain serve                          MCP server (stdio)
  gbrain serve --http [--port 3131]     HTTP MCP server with OAuth 2.1 + admin dashboard
                                        [--token-ttl 3600] [--enable-dcr]
                                        [--public-url URL] [--log-full-params]
  gbrain auth create|list|revoke|test   Legacy bearer token management
  gbrain auth register-client <name>    Register an OAuth 2.1 client
        --grant-types client_credentials,authorization_code
        --scopes "read write admin"
  gbrain auth revoke-client <client_id> Revoke an OAuth 2.1 client (cascade purges
                                        active tokens + auth codes via FK CASCADE)
  # OAuth 2.1 clients can also be registered from the /admin dashboard or
  # programmatically via oauthProvider.registerClientManual() for host-repo wrappers.
  gbrain integrations                   Integration recipe dashboard
  gbrain sources list|add|remove|...    Multi-source brain management (v0.18)
                                        v0.28.2: --url <https://...> registers a federated
                                        remote git repo; clone is auto-managed under
                                        $GBRAIN_HOME/clones/<id>/ and re-cloned on sync if
                                        it goes missing. Also exposed via MCP for remote
                                        agent setup (whoami + sources_{add,list,remove,status}).
  gbrain dream [--dry-run] [--phase N]  11-phase maintenance cycle (lint→backlinks→sync→synthesize
                                        →extract→patterns→recompute_emotional_weight→consolidate
                                        →embed→orphans→purge). v0.23 added synthesize + patterns.
                                        v0.29 added emotional-weight recompute. v0.30.2: synthesize
                                        chunks fat transcripts. v0.31: consolidate promotes hot facts
                                        into takes overnight.
  gbrain dream --input <file>           Ad-hoc transcript synthesis (implies --phase synthesize)
  gbrain dream --date YYYY-MM-DD        Synthesize a single day; --from/--to for backfill ranges

  # v0.31 Hot Memory: cross-session facts queryable in real time.
  gbrain recall <entity>                List active facts for an entity (newest first)
  gbrain recall --since "1h ago"        Recency-filtered recall
  gbrain recall --session <id>          Facts captured in a session id
  gbrain recall --today                 Markdown render with kind icons (📅🎯🤝💭📌)
  gbrain recall --supersessions         Audit log of auto-overwritten facts
  gbrain recall --grep <text>           Substring filter (case-insensitive)
  gbrain recall --as-context            Prompt-injection-ready markdown for headless agents
  gbrain recall --json                  Structured output with effective_confidence per row
  gbrain forget <fact-id>               Expire a fact (soft delete; never hard-DELETE)

  gbrain check-backlinks check|fix      Back-link enforcement
  gbrain lint [--fix]                   LLM artifact detection
  gbrain repair-jsonb [--dry-run]       Repair v0.12.0 double-encoded JSONB (Postgres)
  gbrain orphans [--json] [--count]     Find pages with zero inbound wikilinks
  gbrain transcribe <audio>             Transcribe audio (Groq Whisper)
  gbrain research init <name>           Scaffold a data-research recipe
  gbrain research list                  Show available recipes

Run gbrain --help for the full reference.

Origin Story

I was setting up my OpenClaw agent and started a markdown brain repo. One page per person, one page per company, compiled truth on top, timeline on the bottom. Within a week: 10,000+ files, 3,000+ people, 13 years of calendar data, 280+ meeting transcripts, 300+ captured ideas.

The agent runs while I sleep. The dream cycle scans every conversation, enriches missing entities, fixes broken citations, consolidates memory. I wake up and the brain is smarter than when I went to sleep.

The skills in this repo are those patterns, generalized. What took 11 days to build by hand ships as a mod you install in 30 minutes.

Docs

For agents:

For humans:

Reference:

Benchmarks:

  • gbrain-evals ... BrainBench, the sibling repo that holds the eval harness, corpus, scorecards, and 4-adapter comparisons. Depends on gbrain; not installed alongside gbrain.

Contributing

See CONTRIBUTING.md. Run bun run test for the parallel unit-test fast loop (~85s on a Mac dev box, 3700+ tests) or bun run verify for the pre-push gate (privacy + jsonb + progress + test-isolation + wasm + admin-build + typecheck). For the full local CI gate (gitleaks + unit + all 29 E2E files in Docker, the same checks GH Actions runs), use bun run ci:local ... or bun run ci:local:diff for the diff-aware subset during fast iteration.

If you're working on retrieval or any of the search/embedding/ranking surface, set GBRAIN_CONTRIBUTOR_MODE=1 in your shell rc and use gbrain eval replay to gate your changes against a snapshot of real captured queries — the dev loop is documented in docs/eval-bench.md. Capture is off by default for production users (no surprise data accumulation); the env var is the contributor opt-in.

PRs welcome for: new enrichment APIs, performance optimizations, additional engine backends, new skills following the conformance standard in skills/skill-creator/SKILL.md.

License

MIT

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